VariantTable
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On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Tfap2a (ENSMUSG00000021359)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Tfap2a
note
: transcription factor AP-2, alpha [Source:MGI Symbol;Acc:MGI:104671]
name
Tfap2a (ENSMUSG00000021359)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000110193
name
Tfap2a (ENSMUSG00000021359)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000021787
name
Tfap2a (ENSMUSG00000021359)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26467.1
RefSeq_peptide:
NP_001288603
RefSeq_peptide:
NP_035677
RefSeq_mRNA:
NM_001301674.1
RefSeq_mRNA:
NM_011547.4
RefSeq_peptide_predicted:
XP_006516963.1
RefSeq_peptide_predicted:
XP_006516965.1
UCSC:uc007qej.3
GO:
GO:0000122
GO:
GO:0000976
GO:
GO:0000978
GO:
GO:0000979
GO:
GO:0000981
GO:
GO:0000982
GO:
GO:0000987
GO:
GO:0001077
GO:
GO:0001078
GO:
GO:0001822
GO:
GO:0003713
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005794
GO:
GO:0005813
GO:
GO:0005829
GO:
GO:0006366
GO:
GO:0007605
GO:
GO:0008134
GO:
GO:0008285
GO:
GO:0009414
GO:
GO:0010033
GO:
GO:0010842
GO:
GO:0010944
GO:
GO:0014044
GO:
GO:0030501
GO:
GO:0032496
GO:
GO:0042472
GO:
GO:0043066
GO:
GO:0043231
GO:
GO:0043525
GO:
GO:0043565
GO:
GO:0043565
GO:
GO:0044212
GO:
GO:0045595
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:0060021
GO:
GO:0070172
GO:
GO:0071281
GO:
GO:2000378
MGI_trans_name:
Tfap2a-202
UniParc:
UPI0000021BA7
definition
note
: transcript_id=ENSMUST00000110193
protein_id
: ENSMUSP00000105822
translation
: MLWKLTDNIKYEDCEDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHGLGSGLGDLPIHSLPHAIEDVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVARKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNSAKSSDKEEKHRK
name
Tfap2a (ENSMUSG00000021359)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS49243.1
RefSeq_peptide:
NP_001116420
RefSeq_mRNA:
NM_001122948.2
RefSeq_peptide_predicted:
XP_006516966.1
Uniprot/SPTREMBL:
Q8BPN4
UCSC:uc007qee.3
Fantom:
E130211B13
EMBL:
AC123834
EMBL:
AK053704
EMBL:
CH466546
GO:
GO:0000122
GO:
GO:0000976
GO:
GO:0000978
GO:
GO:0000979
GO:
GO:0000980
GO:
GO:0000981
GO:
GO:0000982
GO:
GO:0000987
GO:
GO:0001077
GO:
GO:0001078
GO:
GO:0001822
GO:
GO:0001843
GO:
GO:0002089
GO:
GO:0003151
GO:
GO:0003334
GO:
GO:0003682
GO:
GO:0003700
GO:
GO:0003713
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005667
GO:
GO:0005737
GO:
GO:0005794
GO:
GO:0005813
GO:
GO:0006355
GO:
GO:0006357
GO:
GO:0006366
GO:
GO:0007605
GO:
GO:0008285
GO:
GO:0009880
GO:
GO:0010172
GO:
GO:0010944
GO:
GO:0014032
GO:
GO:0021506
GO:
GO:0021884
GO:
GO:0030335
GO:
GO:0030501
GO:
GO:0035136
GO:
GO:0042059
GO:
GO:0042472
GO:
GO:0043066
GO:
GO:0043231
GO:
GO:0043524
GO:
GO:0043525
GO:
GO:0043565
GO:
GO:0043588
GO:
GO:0044212
GO:
GO:0045595
GO:
GO:0045664
GO:
GO:0045892
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:0048485
GO:
GO:0048596
GO:
GO:0048701
GO:
GO:0048705
GO:
GO:0048730
GO:
GO:0060021
GO:
GO:0060235
GO:
GO:0060325
GO:
GO:0061303
GO:
GO:0070172
GO:
GO:0071281
GO:
GO:0071711
GO:
GO:2000378
MGI_trans_name:
Tfap2a-201
goslim_goa:
GO:0000988
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005794
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0009790
goslim_goa:
GO:0030154
goslim_goa:
GO:0030198
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
goslim_goa:
GO:0050877
protein_id:
BAC35484.1
protein_id:
EDL40952.1
UniParc:
UPI00000EB062
definition
note
: transcript_id=ENSMUST00000021787
protein_id
: ENSMUSP00000021787
translation
: MLVHSFSAMDRHDGTSNGTARLPQLGTVGQSPYTSAPPLSHTPNADFQPPYFPPPYQPIYPQSQDPYSHVNDPYSLNPLHAQPQPQHPGWPGQRQSQESGLLHTHRGLPHQLSGLDPRRDYRRHEDLLHGPHGLGSGLGDLPIHSLPHAIEDVPHVEDPGINIPDQTVIKKGPVSLSKSNSNAVSAIPINKDNLFGGVVNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQHSDPNEQVARKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISHGFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNSAKSSDKEEKHRK
name
type
misc_feature
link
xref
definition
note
: contig AC123834.4 1..115737(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.