VariantTable
SequenceCutter
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Updated genome
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BAC clone ordering.
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On read coverage region : Click to browse alignment view.
name
Hivep1 (ENSMUSG00000021366)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Hivep1
note
: human immunodeficiency virus type I enhancer binding protein 1 [Source:MGI Symbol;Acc:MGI:96100]
name
Hivep1 (ENSMUSG00000021366)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000060148
name
Hivep1 (ENSMUSG00000021366)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS36643.1
RefSeq_peptide:
NP_031798
RefSeq_mRNA:
NM_007772.2
RefSeq_mRNA_predicted:
XM_011244371.1
RefSeq_peptide_predicted:
XP_006516901.1
RefSeq_peptide_predicted:
XP_006516902.1
RefSeq_peptide_predicted:
XP_006516903.1
RefSeq_peptide_predicted:
XP_011242672.1
RefSeq_peptide_predicted:
XP_011242673.1
Uniprot/SPTREMBL:
F8VPM9
UCSC:uc007qfk.1
EMBL:
AC159258
GO:
GO:0000122
GO:
GO:0000980
GO:
GO:0001206
GO:
GO:0003676
GO:
GO:0003677
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005739
GO:
GO:0005739
GO:
GO:0045892
GO:
GO:0046872
MGI_trans_name:
Hivep1-201
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
UniParc:
UPI00001E7D84
definition
note
: transcript_id=ENSMUST00000060148
protein_id
: ENSMUSP00000056147
translation
: MPRTKQIHPRNLRDKIEEAQKELNGAEVSKKEVLEAGVKGTSESLKGVKRKKIVAENHLKKIPKSPLRNPLQTKHKQNTEEPPFSVLPSASESHKKHNCVPAKQGRQFTKQNGETPGMTAESSESGDLVSPKKTSSPHQRSELRRWRSEGSDPTRLSGLDGQRDSSSSSSKARTDNSECSSPCCSTTPPSYTSTAFDVLLKAMEPELSTLSQKGSSCAIKTEKLRPNKTVRSPSKLKNSSLDAPNATSPDLVVESPCPPCTSYPVHVASTQKSEQVAAQCVSHLYSSQDHLVPKLSQQNQQLPGHLGFTGSLTNLHTLESTKLEPIYNTAVTSTVGLTSPSTRTQVTPPHQQMDSVSPLSVSPASSTQSPPGPIYSSAHVASVVSQSVEQMCSLLLRDQKPKKQGKYICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKHKKSHAHTIKLGLVLQPEAGGLFLSQECPKALSVHSDIEDSGESDEEGLADGRQNNPCVKDLQPVQTMKTVSNPESLPKLIPSNSDHVVRGFSSQDRPSDSQAPTELPKVVVHPVSMPPLKTDCLQVANPNPELPSPQSPRDLHVASILSHSASVSSLEMDESCHQKGDVIQSEGKPDSHSGTAHAQLQRQQATEDPQEQQGKLLLSPRSLGSTDSGYFSRSESADQAVSPPTPFARTFPTMDPDPAKNGGAPGPRISAPAPSALATGEKSSVVTGQMRPPLATKTLEERISKLISDNEALVDDKQLDSVKPRRTSLSRRGSIDSPKSYIFKDSFQFDLKPMGRRTSSSSDIPKSPFTPTEKSKQVFLLSVPSLDCLPITRSNSMPTTGYSAIPANIIPPPPSLRGSQSFDDKIGTLYDDVFVSGPNPSMPPSGHHRPLVRQAAVEDSTASESHVPGSGQSVDESCQGCPSSSEAGPVQSKAAQTPHLEKKKSHQGRGTMFECETCRNRYRKLENFENHKKFYCSELHGPKTKAAVREAEHGPAPGGAQPQVLHYRVAAPTAVWEQTPQIRKRRKMKSVGDEEDLQPHESGRSPESADALQLQPVPGAAPSPSKHTSATAADQAHRGVQLVARGPERALPLKQCPMVEQQLNAAAQDKMEVKRQGGGISVIQHTNSLSRPNSFDKPEPLEGGITFSLQELGRTGMPGALKVIGMAPEEGHPPQDAMHQTALSHNLRGEPRESARKIPSERYVLGQPLRLVRQHNIQVPEILVTEEPDRDLEAQSHDEEKSEKFTWPQRSETLSKLPTEKLPPKKKRLRLAEIEHSSTESSFESTLSRSLSRESSLSHASSFSASLDLEDISKVELAPKIDFPSKAEFLLIPLGSNTLSVPGSHREMRRAASEQISCVPTLMEVSDFRSKSFDCGSIAPSHVVPALVESQPSYSPSAVGGTAHVPLLERRRGPLIRQISLNIASDSHLSPGSAAALQTIVLPSVNTVPFQAPRLPDMASADCPAHTVHPQALAKDLQAEISSSSSTDTFPPQQLFGAHLLNKTNTSLSHQNTPLPLPVSAQGGKPDAAPTACVSSTGEGSFAPKYQLQCQAFTSDQGCSAPLRSSPNQVLPGQAGADPCPASEAPPAKAADPMAKPCPLPPLELGLPRDEVLQKQLPSFVLPVPQKRNVTVDCFTPVTSLPQILVTQDLPNMPICQTNQSLVPVSEEQNSMPKSQNYLQNASPTPEKELACKTVLPEVGQSVPVSESSPTVQKVSVGRLSPQQESSASSKRMLSPANSLDIAMEKHQKRAKDENGAVCSTNIRALELPSSRANESHKQKKPVLVRQLCTTEPLEGAALEQGACSASGRSSNKAANLTQVLPTDSLSSRPSTFAVTDHVNELQEFKNTKVSTSLTPTVGSFPAPSESACVLPLKSIDNNQEKGSPGVRHEENKVIQGQRPPLVSGLSLVSSSDTQQPSFPSLKTATSFTWCYLLRQKALPLAQNDQKTSAYTGWTVSSSNPNPLGLPTKVALSLLNSKQKTGKSLYCQAITTHSKSDLVVYSSKWKNNLSKRALGNQKATVVEFSNKDDSEINSEQDKENSLIKSEPRRIKIFDGGYKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTDVRPYHCSYCNFSFKTKGNLTKHMKSKAHSKKCVDLGVSVGLIDEQDTEESDEKQRFGCERSGYDLEESDGPDEDDNDNEEDDDDSQAESGLSAAPSVTASPQHLPSRSGLQDPGSVEEELRVSSCFSGVHTDPMDILPRALLTKMTVLSTVQSSPNRTDLPAKARQSTEKDEHEQAPPADTPRSPGHQLSVHSSESDVLRSPAAGNPAAGSPGAAVQDSSVGLPPAVAQLNPQPAARISSSVSPHPDSQDQKQQIILQPPPGLPSPQTHLFSHLPLHSQQQSRTPYNMVPVGGIHVVTAGLTYSTFVPIQAGPMQLTIPAVSVIHRTVGTSGDTITEASGAPNRPTGVAELSSVVPCIPIGQIHVPGLQNLSPPALQSLTSLGMETVNLVGLANATVGPQGHPPGLALNAVGLQVLANAPAQSSPAPPAHIQGLQILNIALPTLIPSVGPVAVGTTGTPETTAPNSKAMELQMPAGQGHSAEPPQGSPEGPQETPQTVSGPSADHARPEDSTKMDTKKGPSAGHVLPGRSPAQAQPAPTPEALQKVATSAPPSLPTDRAAPRPPVPHRQPIVHFSDVSSDDDEDRLVIAT
name
type
misc_feature
link
xref
definition
note
: contig AC159258.2 1..219109(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.