VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Tpmt (ENSMUSG00000021376)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Tpmt
note
: thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000021806
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000110118
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000151509
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000136864
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000154802
name
Tpmt (ENSMUSG00000021376)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000124948
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26488.1
RefSeq_peptide:
NP_058065
RefSeq_mRNA:
NM_016785.2
RefSeq_mRNA_predicted:
XM_006516926
RefSeq_peptide_predicted:
XP_006516988.1
RefSeq_peptide_predicted:
XP_006516989.1
Vega_transcript:
OTTMUST00000060976
Vega_transcript:
Tpmt-001
UCSC:uc007qhq.2
GO:
GO:0070062
MGI_trans_name:
Tpmt-001
Vega_translation:
214412
Vega_translation:
OTTMUSP00000029822
OTTP:
OTTMUSP00000029822
OTTT:
OTTMUST00000060976
UniParc:
UPI0000021BB5
definition
note
: transcript_id=ENSMUST00000021806
protein_id
: ENSMUSP00000021806
translation
: MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGTKCSMQCLEEVDALEERHKAWGLDYLFEKLYLLTEK
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060977
Vega_transcript:
Tpmt-002
Uniprot/SPTREMBL:
D3Z380
UCSC:uc007qhr.2
EMBL:
AC096628
GO:
GO:0008119
GO:
GO:0032259
GO:
GO:0070062
MGI_trans_name:
Tpmt-002
Vega_translation:
214413
Vega_translation:
OTTMUSP00000029823
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0008168
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000029823
OTTT:
OTTMUST00000060977
UniParc:
UPI00015AA07C
definition
note
: transcript_id=ENSMUST00000110118
protein_id
: ENSMUSP00000105745
translation
: MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFEK
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060980
Vega_transcript:
Tpmt-005
Uniprot/SPTREMBL:
D6RIK3
EMBL:
AC096628
GO:
GO:0008119
GO:
GO:0032259
GO:
GO:0070062
MGI_trans_name:
Tpmt-005
Vega_translation:
214415
Vega_translation:
OTTMUSP00000029825
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0008168
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000029825
OTTT:
OTTMUST00000060980
UniParc:
UPI00015AA079
definition
note
: transcript_id=ENSMUST00000151509
protein_id
: ENSMUSP00000120564
translation
: MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKC
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060981
Vega_transcript:
Tpmt-006
Uniprot/SPTREMBL:
D3YWK6
UCSC:uc007qhq.2
UCSC:uc007qhr.2
EMBL:
AC096628
GO:
GO:0008119
GO:
GO:0032259
GO:
GO:0070062
MGI_trans_name:
Tpmt-006
Vega_translation:
214416
Vega_translation:
OTTMUSP00000029826
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0008168
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000029826
OTTT:
OTTMUST00000060981
UniParc:
UPI00015AA07A
definition
note
: transcript_id=ENSMUST00000136864
protein_id
: ENSMUSP00000120081
translation
: MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHA
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060979
Vega_transcript:
Tpmt-004
Uniprot/SPTREMBL:
D3Z217
UCSC:uc007qhq.2
UCSC:uc007qhr.2
EMBL:
AC096628
GO:
GO:0008119
GO:
GO:0032259
GO:
GO:0070062
MGI_trans_name:
Tpmt-004
Vega_translation:
214414
Vega_translation:
OTTMUSP00000029824
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0008168
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000029824
OTTT:
OTTMUST00000060979
UniParc:
UPI00015AA07B
definition
note
: transcript_id=ENSMUST00000154802
protein_id
: ENSMUSP00000121827
translation
: MSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAVEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSY
name
Tpmt (ENSMUSG00000021376)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060982
Vega_transcript:
Tpmt-007
Uniprot/SPTREMBL:
D3Z0R1
UCSC:uc007qhs.1
EMBL:
AC096628
GO:
GO:0008119
GO:
GO:0032259
GO:
GO:0070062
MGI_trans_name:
Tpmt-007
Vega_translation:
214417
Vega_translation:
OTTMUSP00000029827
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0008168
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000029827
OTTT:
OTTMUST00000060982
UniParc:
UPI00015AA078
definition
note
: transcript_id=ENSMUST00000124948
protein_id
: ENSMUSP00000115361
translation
: MSFHLGTGDTNLRDKNCLQPVDGTMSLDMKEHPDAEVQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLKGQSGLRVFFPLCGKAV
name
type
misc_feature
link
xref
definition
note
: contig AC096628.14 49055..133273(1)
name
Tpmt (ENSMUSG00000021376)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000060978
Vega_transcript:
OTTMUST00000060978
MGI_trans_name:
Tpmt-003
OTTT:
OTTMUST00000060978
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000133100
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.