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name
Gm37988 (ENSMUSG00000104217)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gm37988
note
: predicted gene, 37988 [Source:MGI Symbol;Acc:MGI:5611216]
name
Tcea1 (ENSMUSG00000033813)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Tcea1
note
: transcription elongation factor A (SII) 1 [Source:MGI Symbol;Acc:MGI:1196624]
name
Gm6104 (ENSMUSG00000062588)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gm6104
note
: predicted gene 6104 [Source:MGI Symbol;Acc:MGI:3648587]
name
Gm37988 (ENSMUSG00000104217)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000155020
name
Tcea1 (ENSMUSG00000033813)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000081551
name
Tcea1 (ENSMUSG00000033813)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000165720
name
Tcea1 (ENSMUSG00000033813)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35505.1
Uniprot/SWISSPROT:
P10711
RefSeq_peptide:
NP_001153222.1
RefSeq_peptide:
NP_035671
RefSeq_mRNA:
NM_001159750.1
RefSeq_mRNA:
NM_011541.4
Vega_transcript:
OTTMUST00000111602
Vega_transcript:
Tcea1-001
Uniprot/SPTREMBL:
Q3UWX7
UCSC:uc007afi.2
Fantom:
7420449J21
EMBL:
AK136035
EMBL:
BC006022
EMBL:
BC061490
EMBL:
BC083127
EMBL:
D00925
EMBL:
M18209
EMBL:
M18210
GO:
GO:0003677
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005730
GO:
GO:0006351
GO:
GO:0008270
GO:
GO:0030218
GO:
GO:0032784
GO:
GO:0045893
GO:
GO:0045944
MGI_trans_name:
Tcea1-001
Vega_translation:
178617
Vega_translation:
OTTMUSP00000062523
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005730
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0042592
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAA40418.1
protein_id:
AAA40419.1
protein_id:
AAH06022.1
protein_id:
AAH61490.1
protein_id:
AAH83127.1
protein_id:
BAA00768.1
protein_id:
BAE22787.1
OTTP:
OTTMUSP00000062523
OTTT:
OTTMUST00000111602
Reactome:
R-MMU-110302
Reactome:
R-MMU-110304
Reactome:
R-MMU-112382
Reactome:
R-MMU-674695
Reactome:
R-MMU-73857
Reactome:
R-MMU-73885
Reactome:
R-MMU-73894
Reactome:
R-MMU-73937
Reactome:
R-MMU-74160
Reactome:
R-MMU-75955
UniParc:
UPI00000278FD
definition
note
: transcript_id=ENSMUST00000081551
protein_id
: ENSMUSP00000080266
translation
: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
name
Tcea1 (ENSMUSG00000033813)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS48212.1
RefSeq_peptide:
NP_001153223
RefSeq_mRNA:
NM_001159751.1
RefSeq_mRNA_predicted:
XM_011238366.1
RefSeq_peptide_predicted:
XP_011236668.1
Vega_transcript:
OTTMUST00000111603
Vega_transcript:
Tcea1-002
Uniprot/SPTREMBL:
E9PYD5
UCSC:uc011whu.1
EMBL:
AC102311
GO:
GO:0003677
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005730
GO:
GO:0005730
GO:
GO:0006351
GO:
GO:0008270
GO:
GO:0030218
GO:
GO:0032784
GO:
GO:0045893
GO:
GO:0045944
MGI_trans_name:
Tcea1-002
Vega_translation:
178618
Vega_translation:
OTTMUSP00000062524
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005730
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0030154
goslim_goa:
GO:0034641
goslim_goa:
GO:0042592
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000062524
OTTT:
OTTMUST00000111603
UniParc:
UPI0001A23060
definition
note
: transcript_id=ENSMUST00000165720
protein_id
: ENSMUSP00000129157
translation
: MCPSVCTTFHPFASTLDLSSQLHLNLFFQTQQAGALDLLKELKNIPMTLELLQSTRIGMSVNALRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKEPAISSQNSPEAREESSSSSNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
name
type
misc_feature
link
xref
definition
note
: contig AC102311.10 1..136304(-1)
name
Gm6104 (ENSMUSG00000062588)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000127359
Vega_transcript:
OTTMUST00000127359
Clone_based_vega_transcript:RP24-426M1.2-001
MGI_trans_name:
Gm6104-001
OTTT:
OTTMUST00000127359
definition
note
: processed_pseudogene
note
: transcript_id=ENSMUST00000078030
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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show
B6N BAC end pairs :
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show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.