VariantTable
SequenceCutter
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BAC clone ordering.
cursor point :
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On read coverage region : Click to browse alignment view.
name
Phf2 (ENSMUSG00000038025)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Phf2
note
: PHD finger protein 2 [Source:MGI Symbol;Acc:MGI:1338034]
name
Phf2 (ENSMUSG00000038025)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000035540
name
Phf2 (ENSMUSG00000038025)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26496.1
Uniprot/SWISSPROT:
Q9WTU0
RefSeq_peptide:
NP_035208
RefSeq_mRNA:
NM_011078.3
UCSC:uc007qin.2
EMBL:
AC109249
EMBL:
AF043726
EMBL:
AK172995
EMBL:
BC051633
GO:
GO:0000777
GO:
GO:0003713
GO:
GO:0003713
GO:
GO:0005506
GO:
GO:0005506
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005730
GO:
GO:0005730
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0006482
GO:
GO:0006482
GO:
GO:0008270
GO:
GO:0032454
GO:
GO:0032454
GO:
GO:0033169
GO:
GO:0035064
GO:
GO:0035064
GO:
GO:0051213
GO:
GO:0055114
GO:
GO:0061188
GO:
GO:0061188
MGI_trans_name:
Phf2-201
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005694
goslim_goa:
GO:0005730
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016491
goslim_goa:
GO:0034641
goslim_goa:
GO:0042393
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0051276
protein_id:
AAD21792.1
protein_id:
AAH51633.1
protein_id:
BAD32273.1
Reactome:
R-MMU-3214842
Reactome:
R-MMU-3247509
Reactome:
R-MMU-4839726
UniParc:
UPI0000191082
definition
note
: transcript_id=ENSMUST00000035540
protein_id
: ENSMUSP00000047308
translation
: MATVPVYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGKSTLKKKRTWHKHGPGPTPDVKPVQNGSQLFIKELRSRTFPSAEDVVSRVPGSQLTVGYMEEHGFTEPILVPKKDGLGLAVPAPTFYVSDVENYVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKPKVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGEKIFYLIRPASANISLYERWRSASNHSEMFFADQVDRCYKCTVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGKHLLEAFKGSHKSGKQLPPHLVQGAKILNGAFRSWTKKQALAEHEDELPEHFRPSQLIKDLAKEIRLSENASKTVRPEVNAAASSDEVCDGDREKEEPPSPVETTPPRSLLEKVSKKKTSKTVKMPKPSKIPKPPKSPKPPKTLKLKDGSKKKGKKCKESASPTIPNLDLLEAHTKEALTKMEPPKKGKTPKSVLSVPNKDTVHTQNDMERLEIREQTKSKSEAKWKYKNSKPDSLLKMEEEQRLEKSPLAGNKDKFSFSFSNRKLLGSKALRPPSSPGVFGALQSFKEDKAKPVRDEYEYVSDDGELKIDEFPIRRKKSAPKRDLSFLLDKKEALLMPTSKPKLDSAVYKSDDSSDEGSLHIDTDTKPGRNAKVKKESGSSAAGILDLLQASEEVGALEYNPNSQPPASPSTQEAIQGMLSMANLQASDSCLQTTWGTGQAKGGSLAAHGARKIGGGNKGTGKRLLKRTAKNSVDLEDYEEQDHLDACFKDSDYVYPSLESDEDNPVFKSRSKKRKGSDDAPYSPTARVGPSVPRQDRPVREGTRVASIETGLAAAAAKLSQQEEQKNRKKKNTKRKPAPNTASPSISTSASASTGTTSASTTPASTTPASTTPASTTPASTSTASSQASQEGSSPEPPPESHSSSLADHEYTAAGTFSGSQAGRASQPMAPGVFLTQRRPSASSPNNTAAKGKRTKKGMATAKQRLGKILKIHRNGKLLL
name
type
misc_feature
link
xref
definition
note
: contig AC109249.17 56530..203574(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.