VariantTable
SequenceCutter
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BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Ddx41 (ENSMUSG00000021494)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Ddx41
note
: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]
name
Ddx41 (ENSMUSG00000021494)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000021956
name
Ddx41 (ENSMUSG00000021494)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26549.1
Uniprot/SWISSPROT:
Q91VN6
RefSeq_peptide:
NP_598820
RefSeq_mRNA:
NM_134059.2
UCSC:uc007qro.2
Fantom:
F830109M10
EMBL:
AK156957
EMBL:
BC011308
GO:
GO:0003677
GO:
GO:0004004
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005634
GO:
GO:0005783
GO:
GO:0006397
GO:
GO:0008270
GO:
GO:0008380
GO:
GO:0010501
GO:
GO:0016020
GO:
GO:0016020
GO:
GO:0035458
GO:
GO:0044822
GO:
GO:0044822
GO:
GO:0045944
GO:
GO:0051607
GO:
GO:0071013
GO:
GO:0071013
MGI_trans_name:
Ddx41-201
goslim_goa:
GO:0002376
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0003723
goslim_goa:
GO:0004386
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005737
goslim_goa:
GO:0005783
goslim_goa:
GO:0006397
goslim_goa:
GO:0006950
goslim_goa:
GO:0008150
goslim_goa:
GO:0016887
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH11308.1
protein_id:
BAE33914.1
Reactome:
R-MMU-168249
Reactome:
R-MMU-168256
Reactome:
R-MMU-1834941
Reactome:
R-MMU-1834949
Reactome:
R-MMU-3134975
Reactome:
R-MMU-3270619
UniParc:
UPI00001E8341
definition
note
: transcript_id=ENSMUST00000021956
protein_id
: ENSMUSP00000021956
translation
: MEDSEPERKRARADEATAGGSRSEDEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGATEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQVSNIGRKDYLAHSSMDF
name
type
misc_feature
link
xref
definition
note
: contig AC126408.6 35333..238967(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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show
Gene, mRNA, CDS :
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show
MSM BAC end pairs :
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show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.