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name
Rb1cc1 (ENSMUSG00000025907)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Rb1cc1
note
: RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
name
Rb1cc1 (ENSMUSG00000025907)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027040
name
Rb1cc1 (ENSMUSG00000025907)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000161327
name
Rb1cc1 (ENSMUSG00000025907)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000162257
name
Rb1cc1 (ENSMUSG00000025907)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000159530
name
Rb1cc1 (ENSMUSG00000025907)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35507.1
Uniprot/SWISSPROT:
Q9ESK9
RefSeq_peptide:
NP_033956
RefSeq_mRNA:
NM_009826.4
RefSeq_mRNA_predicted:
XM_006495443.2
RefSeq_peptide_predicted:
XP_006495506.1
RefSeq_peptide_predicted:
XP_011236640.1
RefSeq_peptide_predicted:
XP_011236641.1
RefSeq_peptide_predicted:
XP_011236642.1
RefSeq_peptide_predicted:
XP_011236643.1
RefSeq_peptide_predicted:
XP_011236644.1
Vega_transcript:
OTTMUST00000084091
Vega_transcript:
Rb1cc1-001
UCSC:uc007afr.2
Fantom:
A530065P16
Fantom:
K530048M04
EMBL:
AB050017
EMBL:
AB070619
EMBL:
AC102781
EMBL:
AC139064
EMBL:
AJ242720
EMBL:
AK041038
EMBL:
AK159066
EMBL:
X82318
GO:
GO:0000045
GO:
GO:0000407
GO:
GO:0001889
GO:
GO:0001934
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005829
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0007049
GO:
GO:0007254
GO:
GO:0007507
GO:
GO:0010506
GO:
GO:0019901
GO:
GO:0031965
GO:
GO:0031965
GO:
GO:0034045
GO:
GO:0043066
GO:
GO:0045793
GO:
GO:1990316
GO:
GO:1990316
GO:
GO:2001237
MGI_trans_name:
Rb1cc1-001
Vega_translation:
178635
Vega_translation:
OTTMUSP00000045266
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005635
goslim_goa:
GO:0005737
goslim_goa:
GO:0005829
goslim_goa:
GO:0006464
goslim_goa:
GO:0006914
goslim_goa:
GO:0006950
goslim_goa:
GO:0007049
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0009058
goslim_goa:
GO:0019899
goslim_goa:
GO:0022607
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
protein_id:
BAB16846.2
protein_id:
BAB85610.1
protein_id:
BAC30793.1
protein_id:
BAE34792.1
protein_id:
CAA57761.1
protein_id:
CAB92238.1
OTTP:
OTTMUSP00000045266
OTTT:
OTTMUST00000084091
Reactome:
R-MMU-1632852
Reactome:
R-MMU-2262752
UniParc:
UPI0000355FED
definition
note
: transcript_id=ENSMUST00000027040
protein_id
: ENSMUSP00000027040
translation
: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRAPAIPKATFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYDVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRPDSLNEHEGSEKAEMKRSTELVLSPDMPRTTNTSLVTSFHKSMEHVAPDPTGTERGKELRESCQSTVQQEEASVDAKDSDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTGITTTTSPKTPPPLTVQDTLCPAVCPLEELSPDSIDAHTFDFETISHPNTEQPVHQASIDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSTRGNEGFGDRAALHVQLEKCRAAAQDSHSSIQTIKDDLCHFRTFVQKEQCDLANYLKCTAVEIRNIIEKVKCSLEITLKEKHQQELQSLKIEYECKLDALVKDSEENVNKILKLKENLVSLEEALQNKDNEFTSIKHEKDAIVCVQQEKDQKLLEMEKIMHTQHCEIKELKQSREMALEDLKKLHDEKIESLRAEFQCLEQNHLKELEDTLHIRHTQEFEKVMTDHNMSLEKLKKENQQRIDQMLESHASTIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRTQQKEMLKSLLEQETENLRTEISKLNQKIHDNNESYQVGLSELRALMTIEKDQCISELISRHEEESNILKAELDNVTSLHRQAYEIEKKLKEQIVELQTRLNSELSALEKQKDEKITQQEEKYEALIQNLEKDKERLVKNHEQDKEHLIQELNFEKNKAVQTALDEFKVERELVEKELLEKVKHLENQIAKTPAFESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKQLEEEVSKLRTSSFLSSAPVAAAPELYGACAPELPGEPERSVMETADEGRLDSAMETSMMSVQENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSLSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
name
Rb1cc1 (ENSMUSG00000025907)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000084200
Vega_transcript:
Rb1cc1-003
Uniprot/SPTREMBL:
F7CC56
UCSC:uc011whx.1
GO:
GO:0001889
GO:
GO:0001934
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0007254
GO:
GO:0007507
GO:
GO:0031965
GO:
GO:0043066
GO:
GO:0045793
GO:
GO:1990316
GO:
GO:2001237
MGI_trans_name:
Rb1cc1-003
Vega_translation:
178638
Vega_translation:
OTTMUSP00000045349
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005635
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0006950
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000045349
OTTT:
OTTMUST00000084200
UniParc:
UPI0001889EB7
definition
codon_start
: 2
note
: transcript_id=ENSMUST00000161327
protein_id
: ENSMUSP00000125348
translation
: XAPAIPKATFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYDVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSDYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRPDSLNEHEGSEKAEMKRSTELVLSPDMPRTTNTSLVTSFHKSMEHVAPDPTDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFMLECHQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKLFRKSFLRNRLFKGLDSWPSSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSTSQASPQSAASPRIESTTGITTTTSPKTPPPLTVQDTLCPAVCPLEELSPDSIDAHTFDFETISHPNTEQPVHQASIDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTSTRGNEGFGDRAALHVQLEKCRAAAQDSHSSIQTIKDDLCHFRTFVQKEQCDLANYLKCTAVEIRNIIEKVKCSLEITLKEKHQQELQSLKIEYECKLDALVKDSEENVNKILKLKENLVSLEEALQNKDNEFTSIKHEKDAIVCVQQEKDQKLLEMEKIMHTQHCEIKELKQSREMALEDLKKLHDEKIESLRAEFQCLEQNHLKELEDTLHIRHTQEFEKVMTDHNMSLEKLKKENQQRIDQMLESHASTIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRTQQKEMLKSLLEQETENLRTEISKLNQKIHDNNESYQVGLSELRALMTIEKDQCISELISRHEEESNILKAELDNVTSLHRQAYEIEKKLKEQIVELQTRLNSELSALEKQKDEKITQQEEKYEALIQNLEKDKERLVKNHEQDKEHLIQELNFEKNKAVQTALDEFKVERELVEKELLEKVKHLENQIAKTPAFESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKQLEEEVSKLRTSSFLSSAPVAAAPELYGACAPELPGEPERSVMETADEGRLDSAMETSMMSVQENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSLSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
name
Rb1cc1 (ENSMUSG00000025907)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000084202
Vega_transcript:
Rb1cc1-005
Uniprot/SPTREMBL:
F6TLJ4
UCSC:uc007aft.2
EMBL:
AC102781
EMBL:
AC139064
GO:
GO:0001889
GO:
GO:0001934
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0007254
GO:
GO:0007507
GO:
GO:0031965
GO:
GO:0043066
GO:
GO:0045793
GO:
GO:1990316
GO:
GO:2001237
MGI_trans_name:
Rb1cc1-005
Vega_translation:
178640
Vega_translation:
OTTMUSP00000045350
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005635
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0006950
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
goslim_goa:
GO:0048856
OTTP:
OTTMUSP00000045350
OTTT:
OTTMUST00000084202
UniParc:
UPI0001889EB8
definition
note
: transcript_id=ENSMUST00000159530
protein_id
: ENSMUSP00000124220
translation
: RDKDLIESLSEDRARLLEEKKQLEEEVSKLRTSSFLSSAPVAAAPELYGACAPELPGEPERSVMETADEGRLDSAMETSMMSVQENMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSLSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
name
type
misc_feature
link
xref
definition
note
: contig AC139064.13 1..180078(-1)
name
Rb1cc1 (ENSMUSG00000025907)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000084204
Vega_transcript:
OTTMUST00000084204
UCSC:uc007afu.2
MGI_trans_name:
Rb1cc1-007
OTTT:
OTTMUST00000084204
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000159656
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.