BAC Information

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BAC

Clone NameB6Ng01-003F21
Chromosome1 (Build37)
Map Location 114,355,946 - 114,356,736
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666578, Dsel, LOC547247, EG626897, LOC666615
Downstream geneLOC666635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003F21.bB6Ng01-003F21.g
ACCDH841104DH841105
length7991,013
definitionDH841104|Mus musculus domesticus DNA, BAC clone: B6Ng01-003F21, 5' end.DH841105|Mus musculus domesticus DNA, BAC clone: B6Ng01-003F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggtgtgtgtgtgtgtgtgtgtaatgaatgttgtttctttgg
attatttttattgctgttgttttggggaattgtttttttttttttttact
ggtttaaaaaggtttgacaaactttgtttctgtggaatccctgatgagaa
ctcaaaagttgaaaaaaaatatgtcacagaaggtaaaattagaatcctta
gagatctgcatgttacccaaatagttaatgaggtgacagggtctgtctga
tgcagctattttagaactcttgaatcaaataaaactttaaaatatccggg
atagcacttggccaagacagtgttctatatatgatttagagacatggcgc
agcacttagccaccaataggtggcctgaatgaactgtgtacatgtggctc
agatatacattcagataaatcaccactacatactacctaacacaacattg
gccaatatgaatgcacagttcaagaattgagttattgctcagtctcagga
ggctgggtgtttcaggtgttctgtataagctggaattatttgcaatcttt
taagaagttgttatttttaattggtgtacacaaaaattgggataagagag
tggcaaactcttgaaagacaaatagttcttgaaatatttagtgacttgca
tgtatttggaaacatctgctgatcgccatagttcacccatactccagaac
tgaagtaatgaacgaagctttgccctcatattttattttgcatggtcttc
tttttgatgacaaacttttgcccttgatatttggtctacagtaaaaaat
gaattcaaggcccatacataaacatgataaaagcaatctacagcaaacct
gtagccaacatcaaagtaaacggagagaaggtggaagcaatcccactaaa
atcagggactagaagaggctgcccaatttctccctacttttcaacatagt
acttgaagtattagccagagcaattcgacaacaaaagaagatcaagggga
tacaatttggaaaagaggaagtcaaaatatcactttttgcagatgacatg
ttagtatatataagtgaccctaaaaattccaccagagaactcctaaacct
gataaaaacctttggtgaagtagctggatataaaataaactcaaacaagt
caatggcctttctctacataaagaataaacaggctgagaaagaaattagg
gaaacaacacccttctcaatagtcacaaataatataaaatatctcggcgt
gactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtctc
tgaagaaagaaattaaaggagatctcagaagatggaaagatctcccatgc
tcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaagc
aatctacagattcaatgcaatccctatctaaaattccaactcagttcttc
aacgaattagaaggagcaatttgcaaatttatctggaataacaaaaacct
tggatagcaaaaactcttctcaaggataaaagaacctctggtgggaatca
ccatgcctgacctaaagctttactacagggcaattgtgataaaaatgcat
ggtactggtatagagacagacaagtgtaccaatggaatagaatttaagac
ccagaaatgaacccatctacctatggtcatctgatcttcgacaaggatgc
tatactttccgtgaaaaaaccagtattttcacattggtgctgcaccaact
ggttgtttcatgtagaagatgtgatctatccatacttatctccttggtct
tgaggccaatcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_114355946_114356736
seq2: B6Ng01-003F21.b_47_845 (reverse)

seq1  AATTTTTACTGTAGACC-AATATCAA-GGCAGAAGTTTGTCATC-AAAAG  47
      | ||||||||||||||| |||||||| |||| |||||||||||| |||||
seq2  ATTTTTTACTGTAGACCAAATATCAAGGGCAAAAGTTTGTCATCAAAAAG  50

seq1  AAGACCATGCAAA--TAAATATGAGGGC-AAGCTTCGTTCATTACTTCAG  94
      |||||||||||||   |||||||||||| |||||||||||||||||||||
seq2  AAGACCATGCAAAATAAAATATGAGGGCAAAGCTTCGTTCATTACTTCAG  100

seq1  -TCTGGAGTATGGGTGAACTATGGCGATCAGCAGATGTTTCCAAATACAT  143
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGTATGGGTGAACTATGGCGATCAGCAGATGTTTCCAAATACAT  150

seq1  GCAAGTCACT-AATATTTCAAGAACTATTTGTCTTTCAAGAGTTTGCCAC  192
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTCACTAAATATTTCAAGAACTATTTGTCTTTCAAGAGTTTGCCAC  200

seq1  TCTCTTATCCCAATTTTTGTGTACACCAATTAAAAATAACAACTTCTTAA  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATCCCAATTTTTGTGTACACCAATTAAAAATAACAACTTCTTAA  250

seq1  AAGATTGCAAATAATTCCAGCTTATACAGAACACCTGAAACACCCAGCCT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCAAATAATTCCAGCTTATACAGAACACCTGAAACACCCAGCCT  300

seq1  CCTGAGACTGAGCAATAACTCAATTCTTGAACTGTGCATTCATATTGGCC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGACTGAGCAATAACTCAATTCTTGAACTGTGCATTCATATTGGCC  350

seq1  AATGTTGTGTTAGGTAGTATGTAGTGGTGATTTATCTGAATGTATATCTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGTGTTAGGTAGTATGTAGTGGTGATTTATCTGAATGTATATCTG  400

seq1  AGCCACATGTACACAGTTCATTCAGGCCACCTATTGGTGGCTAAGTGCTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACATGTACACAGTTCATTCAGGCCACCTATTGGTGGCTAAGTGCTG  450

seq1  CGCCATGTCTCTAAATCATATATAGAACACTGTCTTGGCCAAGTGCTATC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATGTCTCTAAATCATATATAGAACACTGTCTTGGCCAAGTGCTATC  500

seq1  CCGGATATTTTAAAGTTTTATTTGATTCAAGAGTTCTAAAATAGCTGCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGATATTTTAAAGTTTTATTTGATTCAAGAGTTCTAAAATAGCTGCAT  550

seq1  CAGACAGACCCTGTCACCTCATTAACTATTTGGGTAACATGCAGATCTCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACCCTGTCACCTCATTAACTATTTGGGTAACATGCAGATCTCT  600

seq1  AAGGATTCTAATTTTACCTTCTGTGACATATTTTTTTTCAACTTTTGAGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTCTAATTTTACCTTCTGTGACATATTTTTTTTCAACTTTTGAGT  650

seq1  TCTCATCAGGGATTCCACAGAAACAAAGTTTGTCAAACCTTCTTAAACCA  692
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCTCATCAGGGATTCCACAGAAACAAAGTTTGTCAAACCTTTTTAAACCA  700

seq1  GTAAAAAAAAAAAAAAACAATTCCCCAAAACAACAGCAATAAAAATAATC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAAAAAAAAAAAACAATTCCCCAAAACAACAGCAATAAAAATAATC  750

seq1  CAAAGAAACAACATTCATTACACACACACACACACACACCAAAGAATTC  791
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAACAACATTCATTACACACACACACACACACACCAAAGAATTC  799