BAC Information

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BAC

Clone NameB6Ng01-005M13
Chromosome1 (Build37)
Map Location 50,626,955 - 50,628,084
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666962, EG666970, LOC100041993
Downstream geneTmeff2, Sdpr, LOC383504, Obfc2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005M13.bB6Ng01-005M13.g
ACCDH842826DH842827
length1,112272
definitionDH842826|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M13, 5' end.DH842827|Mus musculus domesticus DNA, BAC clone: B6Ng01-005M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaggttaaataatcactcataaaagacattggacaaatgagat
ggtaaaaatctttttccctgacatttagatatcacaagcaaaattcagtt
tcagtaattgtaatccatttaatgccgcttttagaagattgatacttggt
ggtttgtcaactgacatttgcaagcagaccaaacttttatttcactttgt
ttagatataactaaaagaaataaaatttagttaagataaaaatacaggaa
gggaaaatggaaaagtaatttacctataattgacagaaataaatttctgt
agaatactttttctctagatagctaaatttcataacaaatctaaccagct
taacataatgaaaaatttattaaaaatccttgagcgtttaaaatattttg
ataatttacttgataatttttattataactgataaatataatgatatgga
aaataatattaaagcataaatactatttctaaatctaatgttaaatatct
gtgtgttttcatttagttttcataggaaatcttattaaaaatacttagaa
tctttgtcagttgggtttgagctattatgttgcttagggcaccacatatt
aagaatggccagttgtctcactttgtctgattacaaggaaaacaaaaaca
agaaaggatgtatctaagaatcaatattatactcatcaatattgtattca
taaacattatagaaaataggtaagagggagtgtaagcacactgcatgaga
aactcatttgtatcttgtgttatatttgttttcctacactacagctacat
tataactaaaacccctagtgatagatcattcttaaatgggtgatctctct
cttccccatatgcattttatatctcctttatttgataaaataaatcaatg
cagttaacatgagcattattttctctattcggacactttctctaaaaaca
tttccaaagatggccaaagttcagagatttaatttctgtgcttcaggtgt
ttcacaacctacatttctcagcatgtgaatttcctggcttaatggtagaa
aataaatactatgtatgaatttaaggatttgatttagaaaaatgggcttt
tgtatttgaata

aactaaacccagtgaatttaattcatctaattgagcagaagcatctccaa
tgctaagatctggcacaaggaaaagggaaagaacaaaatccttcaaatgt
gctggtgcccctctcaccaatttgcgtcttatagaactggtgaagggcat
atcttctggaccttcccattgtggacaattgggctttacacaatatatcc
actctagcattgcaagaaagagagtaggaggagagaggagaggagagagg
agagtaaagggagtaagagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_50626955_50628084
seq2: B6Ng01-005M13.b_47_1158

seq1  GAATTCAAAGGTTAAATAATCACTCATAAAAGACATTGGACAAATGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGTTAAATAATCACTCATAAAAGACATTGGACAAATGAGAT  50

seq1  GGTAAAAATCTTTTTCCCTGACATTTAGATATCACAAGCAAAATTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAATCTTTTTCCCTGACATTTAGATATCACAAGCAAAATTCAGTT  100

seq1  TCAGTAATTGTAATCCATTTAATGCCGCTTTTAGAAGATTGATACTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATTGTAATCCATTTAATGCCGCTTTTAGAAGATTGATACTTGGT  150

seq1  GGTTTGTCAACTGACATTTGCAAGCAGACCAAACTTTTATTTCACTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTCAACTGACATTTGCAAGCAGACCAAACTTTTATTTCACTTTGT  200

seq1  TTAGATATAACTAAAAGAAATAAAATTTAGTTAAGATAAAAATACAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATATAACTAAAAGAAATAAAATTTAGTTAAGATAAAAATACAGGAA  250

seq1  GGGAAAATGGAAAAGTAATTTACCTATAATTGACAGAAATAAATTTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAATGGAAAAGTAATTTACCTATAATTGACAGAAATAAATTTCTGT  300

seq1  AGAATACTTTTTCTCTAGATAGCTAAATTTCATAACAAATCTAACCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACTTTTTCTCTAGATAGCTAAATTTCATAACAAATCTAACCAGCT  350

seq1  TAACATAATGAAAAATTTATTAAAAATCCTTGAGCGTTTAAAATATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATAATGAAAAATTTATTAAAAATCCTTGAGCGTTTAAAATATTTTG  400

seq1  ATAATTTACTTGATAATTTTTATTATAACTGATAAATATAATGATATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTACTTGATAATTTTTATTATAACTGATAAATATAATGATATGGA  450

seq1  AAATAATATTAAAGCATAAATACTATTTCTAAATCTAATGTTAAATATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATATTAAAGCATAAATACTATTTCTAAATCTAATGTTAAATATCT  500

seq1  GTGTGTTTTCATTTAGTTTTCATAGGAAATCTTATTAAAAATACTTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTCATTTAGTTTTCATAGGAAATCTTATTAAAAATACTTAGAA  550

seq1  TCTTTGTCAGTTGGGTTTGAGCTATTATGTTGCTTAGGGCACCACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCAGTTGGGTTTGAGCTATTATGTTGCTTAGGGCACCACATATT  600

seq1  AAGAATGGCCAGTTGTCTCACTTTGTCTGATTACAAGGAAAACAAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGGCCAGTTGTCTCACTTTGTCTGATTACAAGGAAAACAAAAACA  650

seq1  AGAAAGGATGTATCTAAGAATCAATATTATACTCATCAATATTGTATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGATGTATCTAAGAATCAATATTATACTCATCAATATTGTATTCA  700

seq1  TAAACATTATAGAAAATAGGTAAGAGGGAGTGTAAGCACACTGCATGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTATAGAAAATAGGTAAGAGGGAGTGTAAGCACACTGCATGAGA  750

seq1  AACTCATTTGTATCTTGTGTTATATTTGTTTTCCTACACTACAGCTACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATTTGTATCTTGTGTTATATTTGTTTTCCTACACTACAGCTACAT  800

seq1  TATAACTAAAACCCCTAGTGATAGATCATTCTTAAATGGGTGATCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTAAAACCCCTAGTGATAGATCATTCTTAAATGGGTGATCTCTCT  850

seq1  CTTCCCCATATGCATTTTATATCTCCTTTATTTGATAAAATAAATCAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCATATGCATTTTATATCTCCTTTATTTGATAAAATAAATCAATG  900

seq1  CAGGTTAACATGAGCATTATTTTCTCTTATTCGGACACTTTCTCTAAAAA  950
      || ||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CA-GTTAACATGAGCATTATTTTCTC-TATTCGGACACTTTCTCTAAAAA  948

seq1  CATTTCCAAAGATGGCCAAAGTCCAGAGATTTAATTTCTGTTGCTTCAGA  1000
      |||||||||||||||||||||| ||||||||||||||||| |||||||| 
seq2  CATTTCCAAAGATGGCCAAAGTTCAGAGATTTAATTTCTG-TGCTTCAG-  996

seq1  GTGTTTCACAACCTACATTTCTCAGCATGTGAATTTCCCTGGTATAAATG  1050
      |||||||||||||||||||||||||||||||||||| |||||  | ||||
seq2  GTGTTTCACAACCTACATTTCTCAGCATGTGAATTT-CCTGG-CTTAATG  1044

seq1  GTTAGAAAATAAAATACTTATGTATTGAATTTAAAGTATGTAGAATTTTA  1100
      | |||||||| |||||| |||||| ||||||| ||| || | ||   || 
seq2  G-TAGAAAAT-AAATAC-TATGTA-TGAATTT-AAGGAT-TTGA---TTT  1085

seq1  AGAAAAGAAGGGGGTTTTTGTATTTGAATA  1130
      ||||   ||  ||| |||||||||||||||
seq2  AGAA---AAATGGGCTTTTGTATTTGAATA  1112


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