BAC Information

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BAC

Clone NameB6Ng01-006M01
Chromosome1 (Build37)
Map Location 145,101,057 - 145,102,105
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545369
Downstream geneCdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006M01.bB6Ng01-006M01.g
ACCDH843528DH843529
length1,0521,046
definitionDH843528|Mus musculus domesticus DNA, BAC clone: B6Ng01-006M01, 5' end.DH843529|Mus musculus domesticus DNA, BAC clone: B6Ng01-006M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcacttctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacatagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaatcagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagtcattt
ttacaatgttgatcctgccaatccatgagaatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttcctttgaagtcacgccagatattttatattaatttg
tgacagttgagaaggtggggtgtttccctaattcttctcaccctgcttaa
ttcttgttatagagaaaaggccacttgactggtttgagttaatcttaatt
ca
gaattctttcccgaattttatttttcagtgttgtgagcatggagatgcca
tgaagcttcagggagtggcagcgtcctcattttctaaatgaggggctcat
ataaagaagttcatagtggtctttttatagctgcctctgcctctaccatg
agtagggactgtgaagtagaaggggatatagtctttcaagttgagtgata
cttgcttgtggatttgtgaacattggtcaagagtctgccagtagaacaag
agtatgtggttatgaattctgattatgtcactactactctttgtgggaat
aacttgattttgttgatctttaactttctttcatagaaagggtagagatt
gaatcttactagactggtagaggataaggtgagtcagcatggacaaagac
tttgagtaaggcctgatatacagctgacctcagtgaattttttactgtta
ttaagtgtaagcattcagaaatcatgctaggtattaatatagaagactgt
gttggattcataagacatgaaagaaaattgaggctagaactctggtctac
cacacatgccttttttatggtctggaaaccaggaagttactggccagtgt
cacaattgagactcattgtccatgcagaacattgtgtttggaatatctac
cagcaagagggtaaagcactctgacttacgtattggcagattttatgaat
atgttgctgggtgggattttctttgcatctgggccctggaccctttattt
atataatatattatatatttacatgaatatatataatcatatgagataaa
atataattatataatattatacatatttataatatataaagataaacaca
ctactgtaaaaaagccaatgctgtgtttcccatattatacgtatgttctt
cacacacacacatatatgttcacaaattcatataatggtatacatatata
atatatgtttacaattcatatacatgtatacacacacacacatatgaata
aatgctgagtactatacacctgggtctaagtcttacattttcggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_145101057_145102105
seq2: B6Ng01-006M01.g_64_1109 (reverse)

seq1  AGCCGAAAATGTTAAGACCTAGAGCCAGGTGTATAGTACTCAGCATTTAT  50
      ||||||||||| |||||| |||| ||||||||||||||||||||||||||
seq2  AGCCGAAAATG-TAAGACTTAGACCCAGGTGTATAGTACTCAGCATTTAT  49

seq1  TCATATGTGTGTGTGTGTATACATGTATATGAATTTGTAAACATATTATT  100
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TCATATGTGTGTGTGTGTATACATGTATATGAA-TTGTAAACATA-TATT  97

seq1  ATATATGTATACATTTATATGAATTTGTGAACATATATGTGTGTGTGTGA  150
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  ATATATGTATACCATTATATGAATTTGTGAACATATATGTGTGTGTGTGA  147

seq1  AGAACATACGTATAATATGGGAAACACAGCATTGGCTTTTTTACAGTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACGTATAATATGGGAAACACAGCATTGGCTTTTTTACAGTAGT  197

seq1  GTGTTTATCTTTATATATTATAAATATGTATAATATTATATAATTATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATCTTTATATATTATAAATATGTATAATATTATATAATTATATT  247

seq1  TTATCTCATATGATTATATATATTCATGTAAATATATAATATATTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCATATGATTATATATATTCATGTAAATATATAATATATTATATA  297

seq1  AATAAAGGGTCCAGGGCCCAGATGCAAAGAAAATCCCACCCAGCAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGGTCCAGGGCCCAGATGCAAAGAAAATCCCACCCAGCAACATA  347

seq1  TTCATAAAATCTGCCAATACGTAAGTCAGAGTGCTTTACCCTCTTGCTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAATCTGCCAATACGTAAGTCAGAGTGCTTTACCCTCTTGCTGG  397

seq1  TAGATATTCCAAACACAATGTTCTGCATGGACAATGAGTCTCAATTGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTCCAAACACAATGTTCTGCATGGACAATGAGTCTCAATTGTGA  447

seq1  CACTGGCCAGTAACTTCCTGGTTTCCAGACCATAAAAAAGGCATGTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCAGTAACTTCCTGGTTTCCAGACCATAAAAAAGGCATGTGTGG  497

seq1  TAGACCAGAGTTCTAGCCTCAATTTTCTTTCATGTCTTATGAATCCAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGAGTTCTAGCCTCAATTTTCTTTCATGTCTTATGAATCCAACA  547

seq1  CAGTCTTCTATATTAATACCTAGCATGATTTCTGAATGCTTACACTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCTATATTAATACCTAGCATGATTTCTGAATGCTTACACTTAAT  597

seq1  AACAGTAAAAAATTCACTGAGGTCAGCTGTATATCAGGCCTTACTCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAAAAAATTCACTGAGGTCAGCTGTATATCAGGCCTTACTCAAAG  647

seq1  TCTTTGTCCATGCTGACTCACCTTATCCTCTACCAGTCTAGTAAGATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTCCATGCTGACTCACCTTATCCTCTACCAGTCTAGTAAGATTCA  697

seq1  ATCTCTACCCTTTCTATGAAAGAAAGTTAAAGATCAACAAAATCAAGTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTACCCTTTCTATGAAAGAAAGTTAAAGATCAACAAAATCAAGTTA  747

seq1  TTCCCACAAAGAGTAGTAGTGACATAATCAGAATTCATAACCACATACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAAAGAGTAGTAGTGACATAATCAGAATTCATAACCACATACTC  797

seq1  TTGTTCTACTGGCAGACTCTTGACCAATGTTCACAAATCCACAAGCAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTACTGGCAGACTCTTGACCAATGTTCACAAATCCACAAGCAAGT  847

seq1  ATCACTCAACTTGAAAGACTATATCCCCTTCTACTTCACAGTCCCTACTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTCAACTTGAAAGACTATATCCCCTTCTACTTCACAGTCCCTACTC  897

seq1  ATGGTAGAGGCAGAGGCAGCTATAAAAAGACCACTATGAACTTCTTTATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGAGGCAGAGGCAGCTATAAAAAGACCACTATGAACTTCTTTATA  947

seq1  TGAGCCCCTCATTTAGAAAATGAGGACGCTGCCACTCCCTGAAGCTTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCCCTCATTTAGAAAATGAGGACGCTGCCACTCCCTGAAGCTTCAT  997

seq1  GGCATCTCCATGCTCACAACACTGAAAAATAAAATTCGGGAAAGAATTC  1049
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTCCATGCTCACAACACTGAAAAATAAAATTCGGGAAAGAATTC  1046