BAC Information

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BAC

Clone NameB6Ng01-008C07
Chromosome1 (Build37)
Map Location 148,490,801 - 148,630,888
singlet/doubletdoublet
Overlap geneB830045N13Rik, LOC100043240
Upstream geneLOC383571
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008C07.bB6Ng01-008C07.g
ACCDH844500DH844501
length1,1671,126
definitionDH844500|Mus musculus domesticus DNA, BAC clone: B6Ng01-008C07, 5' end.DH844501|Mus musculus domesticus DNA, BAC clone: B6Ng01-008C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,629,704 - 148,630,888)(148,490,801 - 148,491,953)
sequence
gaattcttaaactccacagtcattttattttgttttgacagaataaatgt
gaagttctttattctgagtactgttgttaaaatgatatcattagataagc
cacttaagcacctgttttgaagaaagatactgtttaaacagattaattct
gccagagctccggagataataatggaattccctgatttaggataaacagc
ttcagtatggatttttgataagaaaccagatgctcatatgcaagtagtag
tagctaaagtctaaaggccatgagatttgtctgttctggtagaaatgaaa
agcaaggaacagatggctagcataaataattcaaaggagctttccaggca
cttgagggaaaaacagcatgtcgaactatgtttacaaggttacttgcaac
ttttgggaagcaaacgtttctatttccttcatctagaagtttagacacaa
aacctatagtcctttaagtcccgatgcctacacaataccacacatataat
gtaagattcatgtctgtaattcatcggcaaaattacaaaaatctacatcc
agggcaaagaacaaactgtggctgaggataaatgggttttcatttattcc
tgaaaaggttatggaaacacccacaaaataattggaatccatttcttcct
acatttattgtttgctattatgtctctacacagcttatctcagttgttgc
agggagaatatgactctgaaattagtcccttagtgaaaaaatatataata
ctagcacaatatatttgctaattctcctgagtccttaaattttataacaa
agtttttatattattctctcttaggcaatatgacactgcattttttcatg
acaaatatttttaaactaatgcttttctctgtttttggttttgagttttc
ctctatatatacaaattcctttgaggactgacactgtatcttactgagaa
acttgcctttgactaaattctggaaatgtagggcaaactattattcctat
atagaaagataggtggtaaacattagtttagatatatacaaatgtctgta
tccctgaactatacattcgataacagtatcttacccatagctacctgatt
tccattggacttggccaattttggaaccactttaggattttgagcaatat
catccttcactgatttt
gaattcaacttaacagagtttaggtggaacagtgcttatcatgtgtaaat
ctcatcttccaagcccaggaagacagaagtcatagacactgagagctgtg
ttcaaaacactgtgagtggacttacctggcatggcaagaaactgttgatg
gctagtctataaaacaccttatgatggcaactctgtttctcagggttaac
cacacagatgaactccctgatatgaattacagcacaagacagataaatca
tgtggacagactacataggaagttccaggaccagattaaattatgtgcct
tttttactataactaaatgatacagaaacatttaatattactcttacatt
ttcccttgttcctatattatataaactatgctgcaccttctctaccttgc
gacattttaaaattaataatatgcactaaatcatacatatttttattaag
aaacatattaaatgtaaaaaaaagttggcatctatacacatattgaataa
ttttactctcggtcaacagcctaggcacacttagttcaggaaatctaatc
acactataatcacaccaagttaggcttctgcattgttttcttaaagaatt
tatagttcatagttcatagttaggtgtcccttaaattaaacctctttcct
aaatcccataacattctgtgttctttataaaatgccatgacattaaattt
aattatgaaatgtcttttctaaggataaggaactacctatagcaaactgc
ctttactttctccctgtaaatgtaacaagatgaatactgagtagacattt
ccactgtctcaggaaatgcgtgtagcttattggccagtgcgtttactttt
acatgtttttaattgaatagaaatacatcacattcccttccctccctaga
tccattttcatctctcttccatgattcttccaatgtcttgcaccctctct
actgcattctctcatttctgtgctgtttgagatcaccaaactggtgtctg
gagcctcacatgtctcctattcccattttctagttctattatcttcagtt
tactttcataagatagtacttaatttgaattaataccttaaagaattaat
ttttgtttatccgatgcatttcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148629704_148630888
seq2: B6Ng01-008C07.b_45_1211 (reverse)

seq1  AAAATACAGTGAA-GATGATATTGCTCAGAAATCACTAAGTGTGTTTTTA  49
      ||||| ||||||| |||||||||||||| |||||   |||||     || 
seq2  AAAAT-CAGTGAAGGATGATATTGCTCA-AAATCCTAAAGTG----GTTC  44

seq1  CAAAAATGGGGCCCAAAGTACAAAGTGAAAATCAGTTAGCTATGGGTAAG  99
      ||||| |||    | |||| |||  || ||||||| ||||||||||||| 
seq2  CAAAATTGG----CCAAGTCCAA--TGGAAATCAGGTAGCTATGGGTAA-  87

seq1  GATACTTGTATAATAAGGATGTATAG-TCAGGGAATACAGACATGTGTAT  148
      ||||||  |||     | |||||||| |||||| |||||||||| |||||
seq2  GATACTGTTAT----CGAATGTATAGTTCAGGG-ATACAGACATTTGTAT  132

seq1  ATATCTAAACTAATGTTTACCCACCTATCTTTCTATATAGGGATAATAGT  198
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  ATATCTAAACTAATGTTTA-CCACCTATCTTTCTATATAGGAATAATAGT  181

seq1  TTGCCCTACATTTCCAGAATTTAGTCCAAGGCAAGTTTTCTCAGTAAGAT  248
      |||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  TTGCCCTACATTTCCAGAATTTAGTCAAAGGCAAG-TTTCTCAGTAAGAT  230

seq1  ACAGTGTCAGTCCTCAAAGGAATTTGTATATATAGAGGAAAACTCAAAAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTCAGTCCTCAAAGGAATTTGTATATATAGAGGAAAACTCAAAAC  280

seq1  CAAAAACAGAGAAAAGCATTAGTTTAAAAATATTTGTCATGAAAAAATGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAGAGAAAAGCATTAGTTTAAAAATATTTGTCATGAAAAAATGC  330

seq1  AGTGTCATATTGCCTAAGAGAGAATAATATAAAAACTTTGTTATAAAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATATTGCCTAAGAGAGAATAATATAAAAACTTTGTTATAAAATT  380

seq1  TAAGGACTCAGGAGAATTAGCAAATATATTGTGCTAGTATTATATATTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACTCAGGAGAATTAGCAAATATATTGTGCTAGTATTATATATTTT  430

seq1  TTCACTAAGGGACTAATTTCAGAGTCATATTCTCCCTGCAACAACTGAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTAAGGGACTAATTTCAGAGTCATATTCTCCCTGCAACAACTGAGA  480

seq1  TAAGCTGTGTAGAGACATAATAGCAAACAATAAATGTAGGAAGAAATGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGTGTAGAGACATAATAGCAAACAATAAATGTAGGAAGAAATGGA  530

seq1  TTCCAATTATTTTGTGGGTGTTTCCATAACCTTTTCAGGAATAAATGAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTATTTTGTGGGTGTTTCCATAACCTTTTCAGGAATAAATGAAA  580

seq1  ACCCATTTATCCTCAGCCACAGTTTGTTCTTTGCCCTGGATGTAGATTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTATCCTCAGCCACAGTTTGTTCTTTGCCCTGGATGTAGATTTT  630

seq1  TGTAATTTTGCCGATGAATTACAGACATGAATCTTACATTATATGTGTGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTGCCGATGAATTACAGACATGAATCTTACATTATATGTGTGG  680

seq1  TATTGTGTAGGCATCGGGACTTAAAGGACTATAGGTTTTGTGTCTAAACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTAGGCATCGGGACTTAAAGGACTATAGGTTTTGTGTCTAAACT  730

seq1  TCTAGATGAAGGAAATAGAAACGTTTGCTTCCCAAAAGTTGCAAGTAACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATGAAGGAAATAGAAACGTTTGCTTCCCAAAAGTTGCAAGTAACC  780

seq1  TTGTAAACATAGTTCGACATGCTGTTTTTCCCTCAAGTGCCTGGAAAGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAACATAGTTCGACATGCTGTTTTTCCCTCAAGTGCCTGGAAAGCT  830

seq1  CCTTTGAATTATTTATGCTAGCCATCTGTTCCTTGCTTTTCATTTCTACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGAATTATTTATGCTAGCCATCTGTTCCTTGCTTTTCATTTCTACC  880

seq1  AGAACAGACAAATCTCATGGCCTTTAGACTTTAGCTACTACTACTTGCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGACAAATCTCATGGCCTTTAGACTTTAGCTACTACTACTTGCAT  930

seq1  ATGAGCATCTGGTTTCTTATCAAAAATCCATACTGAAGCTGTTTATCCTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATCTGGTTTCTTATCAAAAATCCATACTGAAGCTGTTTATCCTA  980

seq1  AATCAGGGAATTCCATTATTATCTCCGGAGCTCTGGCAGAATTAATCTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGAATTCCATTATTATCTCCGGAGCTCTGGCAGAATTAATCTGT  1030

seq1  TTAAACAGTATCTTTCTTCAAAACAGGTGCTTAAGTGGCTTATCTAATGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAGTATCTTTCTTCAAAACAGGTGCTTAAGTGGCTTATCTAATGA  1080

seq1  TATCATTTTAACAACAGTACTCAGAATAAAGAACTTCACATTTATTCTGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTAACAACAGTACTCAGAATAAAGAACTTCACATTTATTCTGT  1130

seq1  CAAAACAAAATAAAATGACTGTGGAGTTTAAGAATTC  1185
      |||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAATAAAATGACTGTGGAGTTTAAGAATTC  1167

seq1: chr1_148490801_148491953
seq2: B6Ng01-008C07.g_69_1194

seq1  GAATTCAACTTAACAGAGTTTAGGTGGAACAGTGCTTATCATGTGTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTAACAGAGTTTAGGTGGAACAGTGCTTATCATGTGTAAAT  50

seq1  CTCATCTTCCAAGCCCAGGAAGACAGAAGTCATAGACACTGAGAGCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTTCCAAGCCCAGGAAGACAGAAGTCATAGACACTGAGAGCTGTG  100

seq1  TTCAAAACACTGTGAGTGGACTTACCTGGCATGGCAAGAAACTGTTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACACTGTGAGTGGACTTACCTGGCATGGCAAGAAACTGTTGATG  150

seq1  GCTAGTCTATAAAACACCTTATGATGGCAACTCTGTTTCTCAGGGTTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTCTATAAAACACCTTATGATGGCAACTCTGTTTCTCAGGGTTAAC  200

seq1  CACACAGATGAACTCCCTGATATGAATTACAGCACAAGACAGATAAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGATGAACTCCCTGATATGAATTACAGCACAAGACAGATAAATCA  250

seq1  TGTGGACAGACTACATAGGAAGTTCCAGGACCAGATTAAATTATGTGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACAGACTACATAGGAAGTTCCAGGACCAGATTAAATTATGTGCCT  300

seq1  TTTTTACTATAACTAAATGATACAGAAACATTTAATATTACTCTTACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTATAACTAAATGATACAGAAACATTTAATATTACTCTTACATT  350

seq1  TTCCCTTGTTCCTATATTATATAAACTATGCTGCACCTTCTCTACCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTGTTCCTATATTATATAAACTATGCTGCACCTTCTCTACCTTGC  400

seq1  GACATTTTAAAATTAATAATATGCACTAAATCATACATATTTTTATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTAAAATTAATAATATGCACTAAATCATACATATTTTTATTAAG  450

seq1  AAACATATTAAATGTAAAAAAAAGTTGGCATCTATACACATATTGAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTAAATGTAAAAAAAAGTTGGCATCTATACACATATTGAATAA  500

seq1  TTTTACTCTCGGTCAACAGCCTAGGCACACTTAGTTCAGGAAATCTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTCTCGGTCAACAGCCTAGGCACACTTAGTTCAGGAAATCTAATC  550

seq1  ACACTATAATCACACCAAGTTAGGCTTCTGCATTGTTTTCTTAAAGAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATAATCACACCAAGTTAGGCTTCTGCATTGTTTTCTTAAAGAATT  600

seq1  TATAGTTCATAGTTCATAGTTAGGTGTCCCTTAAATTAAACCTCTTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTCATAGTTCATAGTTAGGTGTCCCTTAAATTAAACCTCTTTCCT  650

seq1  AAATCCCATAACATTCTGTGTTCTTTATAAAATGCCATGACATTAAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCATAACATTCTGTGTTCTTTATAAAATGCCATGACATTAAATTT  700

seq1  AATTATGAAATGTCTTTTCTAAGGATAAGGAACTACCTATAGCAAACTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGAAATGTCTTTTCTAAGGATAAGGAACTACCTATAGCAAACTGC  750

seq1  CTTTACTTTCTCCCTGTAAATGTAACAAGATGAATACTGAGTAGACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTTTCTCCCTGTAAATGTAACAAGATGAATACTGAGTAGACATTT  800

seq1  CCACTGTCTCAGGAAATGCGTGTAGCTTATTGGCCAGTGCGTTTACTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCTCAGGAAATGCGTGTAGCTTATTGGCCAGTGCGTTTACTTTT  850

seq1  ACATGTTTTTAATTGAAATAGAAATACATCACATTCCCTTCCCTCCCTAG  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACATGTTTTTAATTG-AATAGAAATACATCACATTCCCTTCCCTCCCTAG  899

seq1  ATCCATTTTCATCTCTCCTTCCATGAATTCTTCCAATGTCTTGCACCCTC  950
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  ATCCATTTTCATCTCT-CTTCCATG-ATTCTTCCAATGTCTTGCACCCTC  947

seq1  TCTAACTGCATTCTCTCATTTCTTGTGCTGTTTTGAGATTCACCAAACTG  1000
      ||| |||||||||||||||||| ||||||| ||||||| |||||||||||
seq2  TCT-ACTGCATTCTCTCATTTC-TGTGCTG-TTTGAGA-TCACCAAACTG  993

seq1  GTGTCTGGAGCCTCACATGTCTCCTATTCCCCATTTTCTCAGATTCTATT  1050
      |||||||||||||||||||||||||||| |||||||||| || |||||||
seq2  GTGTCTGGAGCCTCACATGTCTCCTATT-CCCATTTTCT-AG-TTCTATT  1040

seq1  ATCTTCATTTTTACTTTCATAAGATAGTACTTTTAATATTTTTAAAATTT  1100
      |||||||  ||||||||||||||||||||||     || ||| ||   ||
seq2  ATCTTCA-GTTTACTTTCATAAGATAGTACT-----TAATTTGAA---TT  1081

seq1  ATATACCTTTAAAGAATTTAATATTTTTGTTTATCACAGATTGCATTTTC  1150
      | ||||| ||||||||||    |||||||||||||  |   ||||||| |
seq2  A-ATACC-TTAAAGAATT---AATTTTTGTTTATCCGA---TGCATTTCC  1123

seq1  TCT  1153
      |||
seq2  TCT  1126