BAC Information

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BAC

Clone NameB6Ng01-008L03
Chromosome1 (Build37)
Map Location 144,378,985 - 144,508,674
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC639376
Downstream geneLOC545369, Cdc73, B3galt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008L03.bB6Ng01-008L03.g
ACCDH844865DH844866
length767669
definitionDH844865|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L03, 5' end.DH844866|Mus musculus domesticus DNA, BAC clone: B6Ng01-008L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,378,985 - 144,379,751)(144,508,006 - 144,508,674)
sequence
gaattctcaataggcttcattcaagccacatccagacttctcaccaaatg
catattgtgttcaggacataggttcccaggagtgtattacatactttgac
atattaaatattatgtcaatgaacttgctcaatgaacctaatttttcaac
ccaactcatgtttctttctttagactcagcaaaataaaatagtgcaggat
tattgaaattttttcatatatgacatagtcactaatatattcactaacca
tgaatagactgaaatatctatatttaggaacaaatatgtatatacttatt
catatatgaatattataacaattagtaaagtataatgacttgaatttgaa
gaacaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaaggaatatcaagtatcacagggcttagagat
aggaaagggagggggaacatgtagttaaatcaggaacctggtatggctgt
tctgttcactgggaggttctgccagcaactgaccaatacagatagggata
cttggagaaaaccatcagaatgagcttgggaaccccagtgagggagcagg
cagaaggatttcaacccaataggaagaacaatgttgactggccagaccac
ccagtgctcccagtgactagaccaccgaccaaggcgtgtacagggagtga
tccatgcctccagatacatatgtagcagaggagggccttgtctaacatca
atagttccttggtcctg
gaattcactcttgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgcggcacatactggc
tcttcacactttttttcattctttatctcaccctttctttcttctcatct
tcccctttctcctaatatcattttatttatgttctttcacatttgggtat
aaaaatattatgcttaagttattattttttaattttttcttagccctgaa
tgagcccttaaacccttatatttttggaatcaccttatattattagaata
tcgattgcattctcttcttctgagtatttcttctgctatttgttatgaaa
tacacttatattatcattgctattttatcccagttagagacaagatacat
ttgtgatagtactaactgttcttttttttatgttaaaacatggttctctc
tctctctctctctctctctctctctctctctttctctctctctctctcca
tgtagtgacaccatggacaaatagaatccacagttcagtaaacatacaga
tgtggtagacagagaaatagcattaaaatactaaaaaaaaaaaaaaacaa
aacaaaaaactgaccaaactaaattccgtttttactgatactgatggaga
atttttttgttttaagtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_144378985_144379751
seq2: B6Ng01-008L03.b_49_815

seq1  GAATTCTCAATAGGCTTCATTCAAGCCACATCCAGACTTCTCACCAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAATAGGCTTCATTCAAGCCACATCCAGACTTCTCACCAAATG  50

seq1  CATATTGTGTTCAGGACATAGGTTCCCAGGAGTGTATTACATACTTTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTGTTCAGGACATAGGTTCCCAGGAGTGTATTACATACTTTGAC  100

seq1  ATATTAAATATTATGTCAATGAACTTGCTCAATGAACCTAATTTTTCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATATTATGTCAATGAACTTGCTCAATGAACCTAATTTTTCAAC  150

seq1  CCAACTCATGTTTCTTTCTTTAGACTCAGCAAAATAAAATAGTGCAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCATGTTTCTTTCTTTAGACTCAGCAAAATAAAATAGTGCAGGAT  200

seq1  TATTGAAATTTTTTCATATATGACATAGTCACTAATATATTCACTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAATTTTTTCATATATGACATAGTCACTAATATATTCACTAACCA  250

seq1  TGAATAGACTGAAATATCTATATTTAGGAACAAATATGTATATACTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGACTGAAATATCTATATTTAGGAACAAATATGTATATACTTATT  300

seq1  CATATATGAATATTATAACAATTAGTAAAGTATAATGACTTGAATTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGAATATTATAACAATTAGTAAAGTATAATGACTTGAATTTGAA  350

seq1  GAACAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG  400

seq1  AAGAAGAAGAAGAAGAAGAAGGAATATCAAGTATCACAGGGCTTAGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAGAAGAAGAAGAAGGAATATCAAGTATCACAGGGCTTAGAGAT  450

seq1  AGGAAAGGGAGGGGGAACATGTAGTTAAATCAGGAACCTGGTATGGCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGGAGGGGGAACATGTAGTTAAATCAGGAACCTGGTATGGCTGT  500

seq1  TCTGTTCACTGGGAGGTTCTGCCAGCAACTGACCAATACAGATAGGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCACTGGGAGGTTCTGCCAGCAACTGACCAATACAGATAGGGATA  550

seq1  CTTGGAGAAAACCATCAGAATGAGCTTGGGAACCCCAGTGAGGGAGCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGAAAACCATCAGAATGAGCTTGGGAACCCCAGTGAGGGAGCAGG  600

seq1  CAGAAGGATTTCAACCCAATAGGAAGAACAATGTTGACTGGCCAGACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGATTTCAACCCAATAGGAAGAACAATGTTGACTGGCCAGACCAC  650

seq1  CCAGTGCTCCCAGTGACTAGACCACCGACCAAGGCGTGTACAGGGAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGCTCCCAGTGACTAGACCACCGACCAAGGCGTGTACAGGGAGTGA  700

seq1  TCCATGCCTCCAGATACATATGTAGCAGAGGAGGGCCTTGTCTAACATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCCTCCAGATACATATGTAGCAGAGGAGGGCCTTGTCTAACATCA  750

seq1  ATAGTTCCTTGGTCCTG  767
      |||||||||||||||||
seq2  ATAGTTCCTTGGTCCTG  767

seq1: chr1_144508006_144508674
seq2: B6Ng01-008L03.g_67_735 (reverse)

seq1  CCACTTAAAACAAAGAGATTCTCCATCAGTATCAGTAAAAACGGATCTTA  50
      |||||||||||||| | ||||||||||||||||||||||||||||  |||
seq2  CCACTTAAAACAAAAAAATTCTCCATCAGTATCAGTAAAAACGGAATTTA  50

seq1  GTTTGTTTGTTTTTTTGTTTTGTTTTTTTTTTTTTTTAGTATTTTAATGC  100
      ||||| |   ||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCAGTTTTTTGTTTTGTTTTTTTTTTTTTTTAGTATTTTAATGC  100

seq1  TATTTCTCTGTCTACCACATCTGTATGTTTACTGAACTGTGGATTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCTGTCTACCACATCTGTATGTTTACTGAACTGTGGATTCTATT  150

seq1  TGTCCATGGTGTCACTACATGGAGAGAGAGAGAGAGAAAGAGAGAGAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGGTGTCACTACATGGAGAGAGAGAGAGAGAAAGAGAGAGAGAG  200

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAACCATGTTTTAACATAAAAAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAACCATGTTTTAACATAAAAAAAAGA  250

seq1  ACAGTTAGTACTATCACAAATGTATCTTGTCTCTAACTGGGATAAAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAGTACTATCACAAATGTATCTTGTCTCTAACTGGGATAAAATAG  300

seq1  CAATGATAATATAAGTGTATTTCATAACAAATAGCAGAAGAAATACTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATAATATAAGTGTATTTCATAACAAATAGCAGAAGAAATACTCAG  350

seq1  AAGAAGAGAATGCAATCGATATTCTAATAATATAAGGTGATTCCAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGAATGCAATCGATATTCTAATAATATAAGGTGATTCCAAAAAT  400

seq1  ATAAGGGTTTAAGGGCTCATTCAGGGCTAAGAAAAAATTAAAAAATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGGTTTAAGGGCTCATTCAGGGCTAAGAAAAAATTAAAAAATAATA  450

seq1  ACTTAAGCATAATATTTTTATACCCAAATGTGAAAGAACATAAATAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGCATAATATTTTTATACCCAAATGTGAAAGAACATAAATAAAAT  500

seq1  GATATTAGGAGAAAGGGGAAGATGAGAAGAAAGAAAGGGTGAGATAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTAGGAGAAAGGGGAAGATGAGAAGAAAGAAAGGGTGAGATAAAGA  550

seq1  ATGAAAAAAAGTGTGAAGAGCCAGTATGTGCCGCGAGCAATCGCCATTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAAAAGTGTGAAGAGCCAGTATGTGCCGCGAGCAATCGCCATTAT  600

seq1  AAGATGGCGCGGGCCTCCGCTGTGCCTAACTAGTAAACAAGCCTTGTACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGCGCGGGCCTCCGCTGTGCCTAACTAGTAAACAAGCCTTGTACG  650

seq1  CAGGTGCAAGAGTGAATTC  669
      |||||||||||||||||||
seq2  CAGGTGCAAGAGTGAATTC  669