BAC Information

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BAC

Clone NameB6Ng01-011N14
Chromosome1 (Build37)
Map Location 176,817,475 - 176,959,812
singlet/doubletdoublet
Overlap geneGrem2
Upstream geneMnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420, Spna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2
Downstream geneRgs7, Fh1, Kmo, Opn3, Chml, Wdr64, Exo1, Gm104, Pld5, B020018G12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011N14.bB6Ng01-011N14.g
ACCDH847118DH847119
length990221
definitionDH847118|Mus musculus domesticus DNA, BAC clone: B6Ng01-011N14, 5' end.DH847119|Mus musculus domesticus DNA, BAC clone: B6Ng01-011N14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(176,958,826 - 176,959,812)(176,817,475 - 176,817,695)
sequence
gaattccagccagctccagggaatctggaaatcagtgaacacacccattc
tctctctctttctctttctctctctctctctctctctctctctcacacac
acacacacacacacacacacaccagagataattaaagcaaataataaact
aatctttaaaaacagaagtatatataagaaccccctccaacacacacaca
cacacacacacacacacacacacacacacacacacacacacacatacacg
cacacacacattttggaaatgaaactcattccctatttctgtgcttttta
aaaaaatctatacatttttcagagcacgtggccagattttgatcaatatc
tacaggtttattctttcccctctatatatgggtttcatgtttttaaaact
ttcttctcctaaatatatgttatatgtcatcaccaaatgttgctgtgtct
ctaatttgctcagcaaccgtctttgctgggaacgatgtctttagcagact
ctgtgtctttctccccctcaagctcaggtgtggaacagcagctcattctc
ccctgacttaattgaattggcaccagtttccccagagaccacattaacag
cacgcatcactttctggtacccgggtcctggtcatcaatcataggtttca
atgtctgcagacaggcggagccaaaacccctgttcaaaggtgcagagcgc
caactccacacagcaggcctcagctctccaggacgggctgtgtgctgttt
agacgctgtggaatcttgtcctccagccatggtggagccaacaccccttc
cccctcaaggtctgagaacctgtgcttccagcagtgtgcagccctccttg
cagagtcagccttgcgggaaggcttccgcttggaaagagacaggcctgga
gcctgcctgctgagcttgggaattgatgggactgcacccaaagccaagat
gagttttttacagattcatggggagctgggtggggttggg
tatcactcactactggactatttgccacagatagattcagggaaagggaa
tcattgccttcagtaacatacccactaacatccctatcccagtacagtag
acagttccaatccagtggtaacacaaatggctctgttacactaaatgagt
tacataattaggctgaaaatggactagttggaaaggggagtgggggagac
ttgagaaggatggagtgaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176958826_176959812
seq2: B6Ng01-011N14.b_46_1035 (reverse)

seq1  CCCACCCCCACCCCGCCCCCCATGAATCTGTAAAAGACTCATCTTGGCTT  50
      |||| |||||||| || |||||||||||||||||| ||||||||||||||
seq2  CCCAACCCCACCCAGCTCCCCATGAATCTGTAAAAAACTCATCTTGGCTT  50

seq1  TGGGCTGCAGTCCCATCAA-TCCCAAGCTCAGCAGGCAGGCTCCAGGCCT  99
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGG-TGCAGTCCCATCAATTCCCAAGCTCAGCAGGCAGGCTCCAGGCCT  99

seq1  GTCTCCTTCCAAGCGGAAGCCTTTCCCGCAAGGCTGACTCTGC-AGGAGG  148
      ||||| ||||||||||||||| ||||||||||||||||||||| ||||||
seq2  GTCTCTTTCCAAGCGGAAGCC-TTCCCGCAAGGCTGACTCTGCAAGGAGG  148

seq1  GCTGCACACTGCTGGAAGCACAGGTTCTCAGACCTTGAGGGGGAA-GGGT  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTGCACACTGCTGGAAGCACAGGTTCTCAGACCTTGAGGGGGAAGGGGT  198

seq1  GTTGGCTCCACCATGGCTGGAGGACAAGATTCCACAGCGTCTAAACAGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTCCACCATGGCTGGAGGACAAGATTCCACAGCGTCTAAACAGCA  248

seq1  CACAGCCCGTCCTGGAGAGCTGAGGCCTGCTGTGTGGAGTTGGCGCTCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCGTCCTGGAGAGCTGAGGCCTGCTGTGTGGAGTTGGCGCTCTG  298

seq1  CACCTTTGAACAGGGGTTTTGGCTCCGCCTGTCTGCAGACATTGAAACCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGAACAGGGGTTTTGGCTCCGCCTGTCTGCAGACATTGAAACCT  348

seq1  ATGATTGATGACCAGGACCCGGGTACCAGAAAGTGATGCGTGCTGTTAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGATGACCAGGACCCGGGTACCAGAAAGTGATGCGTGCTGTTAAT  398

seq1  GTGGTCTCTGGGGAAACTGGTGCCAATTCAATTAAGTCAGGGGAGAATGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTCTGGGGAAACTGGTGCCAATTCAATTAAGTCAGGGGAGAATGA  448

seq1  GCTGCTGTTCCACACCTGAGCTTGAGGGGGAGAAAGACACAGAGTCTGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGTTCCACACCTGAGCTTGAGGGGGAGAAAGACACAGAGTCTGCT  498

seq1  AAAGACATCGTTCCCAGCAAAGACGGTTGCTGAGCAAATTAGAGACACAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATCGTTCCCAGCAAAGACGGTTGCTGAGCAAATTAGAGACACAG  548

seq1  CAACATTTGGTGATGACATATAACATATATTTAGGAGAAGAAAGTTTTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTGGTGATGACATATAACATATATTTAGGAGAAGAAAGTTTTAA  598

seq1  AAACATGAAACCCATATATAGAGGGGAAAGAATAAACCTGTAGATATTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAAACCCATATATAGAGGGGAAAGAATAAACCTGTAGATATTGA  648

seq1  TCAAAATCTGGCCACGTGCTCTGAAAAATGTATAGATTTTTTTAAAAAGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCTGGCCACGTGCTCTGAAAAATGTATAGATTTTTTTAAAAAGC  698

seq1  ACAGAAATAGGGAATGAGTTTCATTTCCAAAATGTGTGTGTGCGTGTA--  745
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  ACAGAAATAGGGAATGAGTTTCATTTCCAAAATGTGTGTGTGCGTGTATG  748

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  798

seq1  TGTTGGAGGGGGTTCTTATATATACTTCTGTTTTTAAAGATTAGTTTATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAGGGGGTTCTTATATATACTTCTGTTTTTAAAGATTAGTTTATT  848

seq1  ATTTGCTTTAATTATCTCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTAATTATCTCTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA  898

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAATGGGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAAAGAGAGAGAGAATGGGT  948

seq1  GTGTTCACTGATTTCCAGATTCCCTGGAGCTGGCTGGAATTC  987
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCACTGATTTCCAGATTCCCTGGAGCTGGCTGGAATTC  990

seq1: chr1_176817475_176817695
seq2: B6Ng01-011N14.g_74_294

seq1  TATCACTCACTACTGGACTATTTGCCACAGATAGATTCAGGGAAAGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTCACTACTGGACTATTTGCCACAGATAGATTCAGGGAAAGGGAA  50

seq1  TCATTGCCTTCAGTAACATACCCACTAACATCCCTATCCCAGTACAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGCCTTCAGTAACATACCCACTAACATCCCTATCCCAGTACAGTAG  100

seq1  ACAGTTCCAATCCAGTGGTAACACAAATGGCTCTGTTACACTAAATGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCCAATCCAGTGGTAACACAAATGGCTCTGTTACACTAAATGAGT  150

seq1  TACATAATTAGGCTGAAAATGGACTAGTTGGAAAGGGGAGTGGGGGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATTAGGCTGAAAATGGACTAGTTGGAAAGGGGAGTGGGGGAGAC  200

seq1  TTGAGAAGGATGGAGTGAAGG  221
      |||||||||||||||||||||
seq2  TTGAGAAGGATGGAGTGAAGG  221