BAC Information

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BAC

Clone NameB6Ng01-013O08
Chromosome1 (Build37)
Map Location 187,716,061 - 187,717,146
singlet/doubletsinglet
Overlap genenone
Upstream geneMark1, Iars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785
Downstream geneLyplal1, Tgfb2, Rrp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-013O08.bB6Ng01-013O08.g
ACCDH848595DH848596
length1,077944
definitionDH848595|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O08, 5' end.DH848596|Mus musculus domesticus DNA, BAC clone: B6Ng01-013O08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcgctcaattctttttgctccccaactccatacaaatccttta
tctcagtgtgtgaaatgtgcataagttgtgttttcttatctgtacttttg
tcggagttcatgggaagacagacagaccagtgtgtgtaaaaaacaagcaa
cttcagcttcttcctccacaacgttcacagtgtgagaattgcagagcctg
cctacaaactgctgactcctcccctctgtgctgtctacaataaacacatt
aaggttctgcattgttgtggtagctggtatggttccatcccagtgctcac
agacaggttgatgccagatgttcaggacatgtctctgtgtgactgtcctt
tctccatcccttgactgcctcaactcaggtcatagcaccgagcagcaaag
gcaactttcctttgaaggattcaacactgtttagtaggctaacacacagt
atctgacataatatttcttccctgcttgggactcacactttgtgaggccc
agtttccatccttcaggagtctgttatctagtgtgtgcatggaaaacaaa
gaagcatacatttgtttacagcacagtcttgggaaaagacaggaaaagac
cactgttgtgggatatcttgtatccgggtcactgttatccaagtgacctt
agattgacctggttcttcttcttgatcgatgctctcaagaattatataga
atgtactagagatgtcatgcttggagaagaggggggactggtcagaaaaa
tctgtgagaactttgtttctccatagaaatggtgtgtgcttctctgtgtt
ggttcagtgcgttatgctacatttggggtacacaatggaattatggcact
gttgttcatggcccccagctgtggagctgggagggtattcatggatgcta
ctccatctactgcaaaccacttccctgagcctcaggatacactcttatca
gtgatgctagctctattgtcccttgctgcttaaatgtaagtaatatgctc
acattgtgctactgatccaagcaggaaaggtgctcatgaaatgtggcaga
ccaataaaaaaaccaaaaaacaaaaaa
gaattctcacctgatgaatggctgagaaacacctgaaaagaatgttcagc
atccttaatcatcagggaagtgcaaatcaaaacaaccctgagattccatc
tcacaccagtcagaatggcttagatcaaaaattcaggtgacagcagatgc
tggggaggatgtggagaaagaggaacactcctccattgttggtgggattg
caagcttatacaaccagtctggaaatcagtctggcggttcctcagaaaat
cggacatggtattaccggaggatccagtaatacctctcctgggcatatat
ccagaagatgccccaaccgataagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacaaaaaatgtggtacatttacacaatggagtac
tactcagctattaaaaagaatgaatttatgaaattcctagggaaatggat
ggacctggagggcattatcctgagtgacataacccaatcacaaaagaact
caaatgatatgtactcactgataagtgcatattagcccagaaccttagaa
tacccaagatataagttacaattttcaaaacacatgaaactcaaggagaa
cgaagaccaaagtgtgtacactgtgccccttcttagaattggggacaaaa
cacccagggaaggagttacagagacaaagttgggagcttgagaagaaagg
acagaccatctataaactgccatttctgggggatccatccccataatcag
cctccaaagctgacaccatttgtattatactagcaagattttgttgacca
ggaccctgatatagcttgtctctggtgagattatggccagggctttacaa
acacattattggaggctctcagtcagctattcgattggattaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_187716061_187717146
seq2: B6Ng01-013O08.b_47_1123

seq1  GAATTCCTCGCTCAATTCTTTTTGCTCCCCAACTCCATACAAATCCTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCGCTCAATTCTTTTTGCTCCCCAACTCCATACAAATCCTTTA  50

seq1  TCTCAGTGTGTGAAATGTGCATAAGTTGTGTTTTCTTATCTGTACTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGTGTGAAATGTGCATAAGTTGTGTTTTCTTATCTGTACTTTTG  100

seq1  TCGGAGTTCATGGGAAGACAGACAGACCAGTGTGTGTAAAAAACAAGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGAGTTCATGGGAAGACAGACAGACCAGTGTGTGTAAAAAACAAGCAA  150

seq1  CTTCAGCTTCTTCCTCCACAACGTTCACAGTGTGAGAATTGCAGAGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTTCTTCCTCCACAACGTTCACAGTGTGAGAATTGCAGAGCCTG  200

seq1  CCTACAAACTGCTGACTCCTCCCCTCTGTGCTGTCTACAATAAACACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAAACTGCTGACTCCTCCCCTCTGTGCTGTCTACAATAAACACATT  250

seq1  AAGGTTCTGCATTGTTGTGGTAGCTGGTATGGTTCCATCCCAGTGCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTGCATTGTTGTGGTAGCTGGTATGGTTCCATCCCAGTGCTCAC  300

seq1  AGACAGGTTGATGCCAGATGTTCAGGACATGTCTCTGTGTGACTGTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGTTGATGCCAGATGTTCAGGACATGTCTCTGTGTGACTGTCCTT  350

seq1  TCTCCATCCCTTGACTGCCTCAACTCAGGTCATAGCACCGAGCAGCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATCCCTTGACTGCCTCAACTCAGGTCATAGCACCGAGCAGCAAAG  400

seq1  GCAACTTTCCTTTGAAGGATTCAACACTGTTTAGTAGGCTAACACACAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTTCCTTTGAAGGATTCAACACTGTTTAGTAGGCTAACACACAGT  450

seq1  ATCTGACATAATATTTCTTCCCTGCTTGGGACTCACACTTTGTGAGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACATAATATTTCTTCCCTGCTTGGGACTCACACTTTGTGAGGCCC  500

seq1  AGTTTCCATCCTTCAGGAGTCTGTTATCTAGTGTGTGCATGGAAAACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCATCCTTCAGGAGTCTGTTATCTAGTGTGTGCATGGAAAACAAA  550

seq1  GAAGCATACATTTGTTTACAGCACAGTCTTGGGAAAAGACAGGAAAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATACATTTGTTTACAGCACAGTCTTGGGAAAAGACAGGAAAAGAC  600

seq1  CACTGTTGTGGGATATCTTGTATCCGGGTCACTGTTATCCAAGTGACCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTGTGGGATATCTTGTATCCGGGTCACTGTTATCCAAGTGACCTT  650

seq1  AGATTGACCTGGTTCTTCTTCTTGATCGATGCTCTCAAGAATTATATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGACCTGGTTCTTCTTCTTGATCGATGCTCTCAAGAATTATATAGA  700

seq1  ATGTACTAGAGATGTCATGCTTGGAGAAGAGGGGGGACTGGTCAGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTAGAGATGTCATGCTTGGAGAAGAGGGGGGACTGGTCAGAAAAA  750

seq1  TCTGTGAGAACTTTGTTTCTCCATAGAAATGGTGTGTGCTTCTCTGTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGAACTTTGTTTCTCCATAGAAATGGTGTGTGCTTCTCTGTGTT  800

seq1  GGTTCAGTGCGTTATGCTACATTTGGGGTACACAATGGAATTAGGGCACT  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGTTCAGTGCGTTATGCTACATTTGGGGTACACAATGGAATTATGGCACT  850

seq1  GTTGTTCATGGCCCCCAGCTGTGGAGCTGGGAGGGTATTCATGGATGCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCATGGCCCCCAGCTGTGGAGCTGGGAGGGTATTCATGGATGCTA  900

seq1  CTCCATCTACTGCAAACCACTTCCCTGAGCCTCAGGATACACTCTTATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCTACTGCAAACCACTTCCCTGAGCCTCAGGATACACTCTTATCA  950

seq1  GTGATGCTAGCTTCTATTGTCCCTTGCTGCTTAGATGTAAGTAATATGCT  1000
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  GTGATGCTAGC-TCTATTGTCCCTTGCTGCTTAAATGTAAGTAATATGCT  999

seq1  CACATTGTTGCTATCTGATCCAAAGCAGGAAAAGTGCCACATGAGATGTG  1050
      ||||||| ||||| ||||||| |||||||||| ||| | ||||| |||||
seq2  CACATTG-TGCTA-CTGATCC-AAGCAGGAAAGGTG-CTCATGAAATGTG  1045

seq1  GCAGACCAAAAAAAAAAAAACCCAAAAAACAAAAAA  1086
      ||||||||| |||||||    |||||||||||||||
seq2  GCAGACCAATAAAAAAA----CCAAAAAACAAAAAA  1077