BAC Information

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BAC

Clone NameB6Ng01-016I19
Chromosome1 (Build37)
Map Location 96,848,264 - 96,849,349
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666009, EG619597, Neu4, Pdcd1, LOC666012, LOC666025, LOC100040685
Downstream geneLOC383603, Tmem157, LOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I19.bB6Ng01-016I19.g
ACCDH850482DH850483
length1,2091,091
definitionDH850482|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I19, 5' end.DH850483|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacatttttcattcaccagagaaggtggccccaagtcacatctt
tcatgtgtggacagtgtcgagtagtagcggatataaaccaggaaatttta
atttatttgaagccagacgaatgattttacttgtatctttaattcttaga
attatgagcattagagagtttaaatatcctattgcctttttccaaaaaaa
caaagaactgaaggggtttatctgaactcatgttctcagaggatatataa
cccatgattccacaggtaagtgattgtttcctttgaaactaaagcaaagc
agaacagagaggggcgacctatgatagggcagtgctacttaccccagagc
cagtgagagtgaaggaagagttatatagacttacacaaataaaagagaga
ggcagagacaatgagagatagagagcaagcgatacagagagaaaggacaa
ctgattacacaatagacctttcaaaggcatagccctagtcagtttctctg
accaggaccaaacattagtaatgcattcggtatgaaaagcgatgaatggg
gtagtctctggattgtccatcctttcatcttagctacaaactttgtctct
gtaactcctttcatgggtattttgttccctattctaaggaggaatgaagt
atccacccattggtcttccctcttcttgattttcttgtgttttgcaaatt
gtatcttgggtgttctatgtttctgggttaatatccacttatcaatgagt
gcatatctaatgccttcttttgtgattgggttacctcactgatgatatcc
tccatatacatccatttgtccaagaatttcataaatccattgtttttaag
agctgtgtagtactccattgtgtaaatgtatcacattttctgtatccatt
cttctgttgagtgacatctgggttctttccagctgctggctattataaat
aagctgctatgacatagtgagcatgtgtcttatatcatttggaacttctt
ctgggtatgaagaagctagaagaaagcactcagaagctgaacggtctgca
accctattagttgaacagcaaatgactaacaggtatcctcgagctcgtat
ctctagctgctagtacagaagatggcctaatggcatcactgggagagaag
ccttgcttgcaactttaatgcccagttcaggattcaggtcaagacaggat
gattgtgta
gaattctatgcagaacacttttatgaatagaatacacctgcatctgaaaa
cagaaagaaatcatttctctgtatcatcttaaaacattttaggatagtgt
taggtaaatgttcctttgattagcaattttagagagagtttataaccatg
ggaaaatagtcacccctaaaatgctaaagagcctttttcttttttcttgt
tttctttcttctgtgtttcattcaaacttaggagagtaaaattaaaacaa
tgaaaattgttttattttcatataatttatataagcttaagtttgctcaa
ttctgcatttacaatgtagatctggatcctctctgagccctgaagaaaag
gggaggaatggttttaggagtctgaggaaatggagaataccaagagaaaa
tgattcattaaatcaaccaagcagtttttacatgggtcagagattaaaat
ggcaatcacagggctttcctgcatggtcctctgcacatatgttgtagcca
atagcttggtgtttttgtggaatctctaaaaatcaaaaccaatagttttc
ttgctcttttgcctgctctcagagaactcttttgttcctgttggattgct
ttgcacagcctccatatgaggggttttgtcatgtcttgttatgtcttgtt
tggtcctgtttggttattgtcgtttggaggtctgctcttttctgaatagg
gaagaaaggactggatctggaccgaggagaggaaagatgtagagagaatc
tagaaagagtggaaggaggggacactgtgctcaggatgtattgtatgaaa
gaaaatctattttcaataaaaataatttaaaaatcagtcatatttatata
tttctaagagatgacagtattatctttaaacaatttttctcaaagcaatt
ccacatttcacctagaggactgtatctgaatgtttaagtcctcatataag
caacagagctttttttatgctagaagaaaaatgattaaagtttagattgg
aatatcctccactcatcactacgtaaacactagctcacctccaaaacaat
aaattcaattggttttttatttgtgatgtgaaaatgtatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_96848264_96849349
seq2: B6Ng01-016I19.g_68_1158

seq1  GAATTCTATGCAGAACACTTTTATGAATAGAATACACCTGCATCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGCAGAACACTTTTATGAATAGAATACACCTGCATCTGAAAA  50

seq1  CAGAAAGAAATCATTTCTCTGTATCATCTTAAAACATTTTAGGATAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGAAATCATTTCTCTGTATCATCTTAAAACATTTTAGGATAGTGT  100

seq1  TAGGTAAATGTTCCTTTGATTAGCAATTTTAGAGAGAGTTTATAACCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAATGTTCCTTTGATTAGCAATTTTAGAGAGAGTTTATAACCATG  150

seq1  GGAAAATAGTCACCCCTAAAATGCTAAAGAGCCTTTTTCTTTTTTCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATAGTCACCCCTAAAATGCTAAAGAGCCTTTTTCTTTTTTCTTGT  200

seq1  TTTCTTTCTTCTGTGTTTCATTCAAACTTAGGAGAGTAAAATTAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTCTGTGTTTCATTCAAACTTAGGAGAGTAAAATTAAAACAA  250

seq1  TGAAAATTGTTTTATTTTCATATAATTTATATAAGCTTAAGTTTGCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTGTTTTATTTTCATATAATTTATATAAGCTTAAGTTTGCTCAA  300

seq1  TTCTGCATTTACAATGTAGATCTGGATCCTCTCTGAGCCCTGAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTTACAATGTAGATCTGGATCCTCTCTGAGCCCTGAAGAAAAG  350

seq1  GGGAGGAATGGTTTTAGGAGTCTGAGGAAATGGAGAATACCAAGAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAATGGTTTTAGGAGTCTGAGGAAATGGAGAATACCAAGAGAAAA  400

seq1  TGATTCATTAAATCAACCAAGCAGTTTTTACATGGGTCAGAGATTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCATTAAATCAACCAAGCAGTTTTTACATGGGTCAGAGATTAAAAT  450

seq1  GGCAATCACAGGGCTTTCCTGCATGGTCCTCTGCACATATGTTGTAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCACAGGGCTTTCCTGCATGGTCCTCTGCACATATGTTGTAGCCA  500

seq1  ATAGCTTGGTGTTTTTGTGGAATCTCTAAAAATCAAAACCAATAGTTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTTGGTGTTTTTGTGGAATCTCTAAAAATCAAAACCAATAGTTTTC  550

seq1  TTGCTCTTTTGCCTGCTCTCAGAGAACTCTTTTGTTCCTGTTGGATTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTTGCCTGCTCTCAGAGAACTCTTTTGTTCCTGTTGGATTGCT  600

seq1  TTGCACAGCCTCCATATGAGGGGTTTTGTCATGTCTTGTTATGTCTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACAGCCTCCATATGAGGGGTTTTGTCATGTCTTGTTATGTCTTGTT  650

seq1  TGGTCCTGTTTGGTTATTGTCGTTTGGAGGTCTGCTCTTTTCTGAATAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTGTTTGGTTATTGTCGTTTGGAGGTCTGCTCTTTTCTGAATAGG  700

seq1  GAAGAAAGGACTGGATCTGGACCGAGGAGAGGAAAGATGTAGAGAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGACTGGATCTGGACCGAGGAGAGGAAAGATGTAGAGAGAATC  750

seq1  TAGAAAGAGTGGAAGGAGGGGACACTGTGCTCAGGATGTATTGTATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAGTGGAAGGAGGGGACACTGTGCTCAGGATGTATTGTATGAAA  800

seq1  GAAAATCTATTTTCAATAAAAATAATTTAAAAATCAGTCATA-TTATATA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GAAAATCTATTTTCAATAAAAATAATTTAAAAATCAGTCATATTTATATA  850

seq1  TTTCTAAGAGATGACAGTATTATCTTTAAACAA-TTTTCTCCAAGCCAAT  898
      ||||||||||||||||||||||||||||||||| ||||||| |||| | |
seq2  TTTCTAAGAGATGACAGTATTATCTTTAAACAATTTTTCTCAAAGCAATT  900

seq1  CCACATTTCACCTAGA-GACTGTATCTGAATGTCTAAGTCCTCATAATAA  947
      |||||||||||||||| |||||||||||||||| ||||||||||| ||||
seq2  CCACATTTCACCTAGAGGACTGTATCTGAATGTTTAAGTCCTCAT-ATAA  949

seq1  GCAACAGAGC-TTCTTTATGCTAGAAG-AGAATGATTAAAGTTGTAGATT  995
      |||||||||| || ||||||||||||| | ||||||||||||| ||||||
seq2  GCAACAGAGCTTTTTTTATGCTAGAAGAAAAATGATTAAAGTT-TAGATT  998

seq1  GGAATAT-CTCCACTCATCACTACGTAAACACTAGCTCACTCTCAAAACA  1044
      ||||||| ||||||||||||||||||||||||||||||||   |||||||
seq2  GGAATATCCTCCACTCATCACTACGTAAACACTAGCTCACCTCCAAAACA  1048

seq1  AT-AATTCAAAT-GTGTTTTATTTGTGAGTGTGAAAATGTATGG  1086
      || ||||||| | || |||||||||||| |||||||||||||||
seq2  ATAAATTCAATTGGTTTTTTATTTGTGA-TGTGAAAATGTATGG  1091