BAC Information

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BAC

Clone NameB6Ng01-017E21
Chromosome1 (Build37)
Map Location 62,058,182 - 62,209,547
singlet/doubletdoublet
Overlap genePard3b
Upstream geneLOC433313, LOC100042566
Downstream geneLOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017E21.bB6Ng01-017E21.g
ACCDH851028DH851029
length777756
definitionDH851028|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E21, 5' end.DH851029|Mus musculus domesticus DNA, BAC clone: B6Ng01-017E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,208,771 - 62,209,547)(62,058,182 - 62,058,937)
sequence
gaattcacaccactgtcctcgcacacaaacacacctaatgctcaggtgta
ttgggtcagattctcctcttgttatctcatcagatctgtgagtcactgtt
attatcatctccgtatagaatggagctagcatctgtttggttcatttgtc
ctatctcctcccatccatctgtgtctctgtgcctctccctctttcctaaa
tagttcaaactttgctatgtttctccttcaatccagaccctgccattatc
aaatatcctcatctacttaaaattctaatttcaaacaatgatatttctag
gatgcaaatttccctgactgaaaacctcagctaaaactgtaatttttctt
tcttccttcctacaaccgtctatctattaaggaatgtctgttatagcttc
acatttaggcagaggcaacgcacccggctgctcggctccctcaggacatc
ttctcacgactctgtgcctgattcatctctctataggcaaaggactgaac
tcatatgctagctgtgttattgcttcataataatgcatgtggacatggct
tatttgtaatgcatttacagacagctatataaaactctgtgtcttcttaa
tttgctttattcccaggaaaagacttttgtaaatgaatacaatttgattg
gagaaatcttcccagaatattttatacattctaataaaagatacaggtta
tttgtttctgaaattcacaaataattttaaaaagttttatggtggccatt
aaattcagtggggggtgtgtgtggtgg
gaattccaggacagccaaaaagctacatagtgagatgttgtttcaaaaaa
taaaataaaattactgttaaatttattatatatagccgaaccaaataacc
ttactttgtcttgattttctgaaaagcttctgtagtgtctctttaaaagc
aaaccaaatggaaattaatgacctatggtctttataattttcctgcatat
tttggaatcaaagctaacaaagcagtctgcatagatggtgaagggctggt
tggtggctgctcctcttctagagccaggcttgtggcttcagcaaccttgc
agccccatcgctcatttgcataatggatgcctttttatccattatgcaaa
tggtatgagaggaaaattaggcaataagggaagacgaaaggagaaaattg
ctcttgcttgttttaatattctatttataagcaagtgctgtgggcttcga
aagacagactcggggtatccctgccttgggaaacttgtttccacctttct
cttctgggctttttctggaaagaaagcttgttttcggttttcatttcaca
gcttcttttgttggaccatctgataaagatagtggtgttgaatccaagaa
gaaaaaccaactcaccttctcttcttttcaaagtagattctttttctatt
tctaaaagatttattgtatttttattcattcattcattcattcattcatt
catttatttgtgtgtgtgtgtttgtgtgttatattagaggctagagtagg
atggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62208771_62209547
seq2: B6Ng01-017E21.b_44_820 (reverse)

seq1  CCACCACACACACCCCCCACTGAATTTAATGGCCACCATAAAACTTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACACACACCCCCCACTGAATTTAATGGCCACCATAAAACTTTTTA  50

seq1  AAATTATTTGTGAATTTCAGAAACAAATAACCTGTATCTTTTATTAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTGTGAATTTCAGAAACAAATAACCTGTATCTTTTATTAGAAT  100

seq1  GTATAAAATATTCTGGGAAGATTTCTCCAATCAAATTGTATTCATTTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAATATTCTGGGAAGATTTCTCCAATCAAATTGTATTCATTTACA  150

seq1  AAAGTCTTTTCCTGGGAATAAAGCAAATTAAGAAGACACAGAGTTTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTTTCCTGGGAATAAAGCAAATTAAGAAGACACAGAGTTTTATA  200

seq1  TAGCTGTCTGTAAATGCATTACAAATAAGCCATGTCCACATGCATTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCTGTAAATGCATTACAAATAAGCCATGTCCACATGCATTATTA  250

seq1  TGAAGCAATAACACAGCTAGCATATGAGTTCAGTCCTTTGCCTATAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAATAACACAGCTAGCATATGAGTTCAGTCCTTTGCCTATAGAGA  300

seq1  GATGAATCAGGCACAGAGTCGTGAGAAGATGTCCTGAGGGAGCCGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATCAGGCACAGAGTCGTGAGAAGATGTCCTGAGGGAGCCGAGCAG  350

seq1  CCGGGTGCGTTGCCTCTGCCTAAATGTGAAGCTATAACAGACATTCCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTGCGTTGCCTCTGCCTAAATGTGAAGCTATAACAGACATTCCTTA  400

seq1  ATAGATAGACGGTTGTAGGAAGGAAGAAAGAAAAATTACAGTTTTAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGACGGTTGTAGGAAGGAAGAAAGAAAAATTACAGTTTTAGCTG  450

seq1  AGGTTTTCAGTCAGGGAAATTTGCATCCTAGAAATATCATTGTTTGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCAGTCAGGGAAATTTGCATCCTAGAAATATCATTGTTTGAAAT  500

seq1  TAGAATTTTAAGTAGATGAGGATATTTGATAATGGCAGGGTCTGGATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTTAAGTAGATGAGGATATTTGATAATGGCAGGGTCTGGATTGA  550

seq1  AGGAGAAACATAGCAAAGTTTGAACTATTTAGGAAAGAGGGAGAGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAACATAGCAAAGTTTGAACTATTTAGGAAAGAGGGAGAGGCACA  600

seq1  GAGACACAGATGGATGGGAGGAGATAGGACAAATGAACCAAACAGATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACAGATGGATGGGAGGAGATAGGACAAATGAACCAAACAGATGCT  650

seq1  AGCTCCATTCTATACGGAGATGATAATAACAGTGACTCACAGATCTGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCATTCTATACGGAGATGATAATAACAGTGACTCACAGATCTGATG  700

seq1  AGATAACAAGAGGAGAATCTGACCCAATACACCTGAGCATTAGGTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACAAGAGGAGAATCTGACCCAATACACCTGAGCATTAGGTGTGTT  750

seq1  TGTGTGCGAGGACAGTGGTGTGAATTC  777
      |||||||||||||||||||||||||||
seq2  TGTGTGCGAGGACAGTGGTGTGAATTC  777

seq1: chr1_62058182_62058937
seq2: B6Ng01-017E21.g_67_822

seq1  GAATTCCAGGACAGCCAAAAAGCTACATAGTGAGATGTTGTTTCAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAAAAAGCTACATAGTGAGATGTTGTTTCAAAAAA  50

seq1  TAAAATAAAATTACTGTTAAATTTATTATATATAGCCGAACCAAATAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAATTACTGTTAAATTTATTATATATAGCCGAACCAAATAACC  100

seq1  TTACTTTGTCTTGATTTTCTGAAAAGCTTCTGTAGTGTCTCTTTAAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGTCTTGATTTTCTGAAAAGCTTCTGTAGTGTCTCTTTAAAAGC  150

seq1  AAACCAAATGGAAATTAATGACCTATGGTCTTTATAATTTTCCTGCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAATGGAAATTAATGACCTATGGTCTTTATAATTTTCCTGCATAT  200

seq1  TTTGGAATCAAAGCTAACAAAGCAGTCTGCATAGATGGTGAAGGGCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATCAAAGCTAACAAAGCAGTCTGCATAGATGGTGAAGGGCTGGT  250

seq1  TGGTGGCTGCTCCTCTTCTAGAGCCAGGCTTGTGGCTTCAGCAACCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGCTGCTCCTCTTCTAGAGCCAGGCTTGTGGCTTCAGCAACCTTGC  300

seq1  AGCCCCATCGCTCATTTGCATAATGGATGCCTTTTTATCCATTATGCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCATCGCTCATTTGCATAATGGATGCCTTTTTATCCATTATGCAAA  350

seq1  TGGTATGAGAGGAAAATTAGGCAATAAGGGAAGACGAAAGGAGAAAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGAGAGGAAAATTAGGCAATAAGGGAAGACGAAAGGAGAAAATTG  400

seq1  CTCTTGCTTGTTTTAATATTCTATTTATAAGCAAGTGCTGTGGGCTTCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGCTTGTTTTAATATTCTATTTATAAGCAAGTGCTGTGGGCTTCGA  450

seq1  AAGACAGACTCGGGGTATCCCTGCCTTGGGAAACTTGTTTCCACCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGACTCGGGGTATCCCTGCCTTGGGAAACTTGTTTCCACCTTTCT  500

seq1  CTTCTGGGCTTTTTCTGGAAAGAAAGCTTGTTTTCGGTTTTCATTTCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCTTTTTCTGGAAAGAAAGCTTGTTTTCGGTTTTCATTTCACA  550

seq1  GCTTCTTTTGTTGGACCATCTGATAAAGATAGTGGTGTTGAATCCAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTTTGTTGGACCATCTGATAAAGATAGTGGTGTTGAATCCAAGAA  600

seq1  GAAAAACCAACTCACCTTCTCTTCTTTTCAAAGTAGATTCTTTTTCTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACCAACTCACCTTCTCTTCTTTTCAAAGTAGATTCTTTTTCTATT  650

seq1  TCTAAAAGATTTATTGTATTTTTATTCATTCATTCATTCATTCATTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAGATTTATTGTATTTTTATTCATTCATTCATTCATTCATTCATT  700

seq1  CATTTATTTGTGTGTGTGTGTTTGTGTGTTATATTAGAGGCTAGAGTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTGTGTGTGTGTGTTTGTGTGTTATATTAGAGGCTAGAGTAGG  750

seq1  ATGGTG  756
      ||||||
seq2  ATGGTG  756