BAC Information

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BAC

Clone NameB6Ng01-018I05
Chromosome14 (Build37)1 (Build37)
Map Location 59,460,608 - 59,461,59984,869,970 - 84,870,121
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneZdhhc20, Efha1, LOC668160, Fgf9, LOC100043554
Downstream geneEG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46, Atp8a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018I05.bB6Ng01-018I05.g
ACCDH851896DH851897
length990687
definitionDH851896|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I05, 5' end.DH851897|Mus musculus domesticus DNA, BAC clone: B6Ng01-018I05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(59,460,608 - 59,461,599)(84,869,970 - 84,870,121)
sequence
gaattcctgggctcttcctttttcctttcttgttctcatggtactgatgg
actccagcaagagttgagaggcagtctcagaacaatcttatttggattta
gtatttaactctcaaactttcagctgatctttactgctaatgttcatgtg
atttatctgaaacaaacaaacaaacaaactggaaaaagaaaatttaccag
ctctgagatggtttgtcttgtgataactgaatacacacagggtctccagt
tcactgtttctcagctaaaggtattaaacattctgctcagcatatgagaa
tgaagatggatggaatccaatggctgccctaaggctctgttagaatgtgg
acgcacctagataagtaccacgatgtgtgacaatcaggaccctgccagga
tcacatggcagtaggcacagtaaagctcaccttatgaaaaagagggtggc
tggccagggaagtctctggaagaagtgagatctaagccctggtattaatc
cctctggagctgccatgataatatcagaagttgggtggctgatcaaggta
ctgatgtatttcctcacagttctgggaaatgctggaaagttcaagataaa
tgtactagaaaagttgaagtctgctgagaacacacttcctggttcataga
ttaatgcctgttctgtgtctcacatggtaaaaggcagtgggtcccttggg
tctcttttatgaggacactaatcctgctcataacagttctgtctttgatg
aagtaatttatacccaaaggccttcccaccacctgggagtgagacttttg
tcatacaaaagtgcagagacttattttaggccacagctgcccataaggat
ttctgtcctttctgcagtcactgccaggttgtcagccaccctttgtgttt
gaactgttgatcgaacattgttctgaacccttgagccttgttgtctgtct
ctgctttcactctacaaaactccgtttattcctttctaaa
gaattcacatcttgatccaaaagttacagatccaagagtgagagagagag
agagagagagagagagagagagagagagagagagagagagagagagagag
agagagagagattttaattaggactggcacaaatctttttaaacatcaaa
gcctacccccagtaacacacctcctcccacaaggccacacctcctaatcc
ttcccaaactgttccacaaactgaggatcagtcattcaaaaacatggggg
aacaatctcattttaaatcaccattgtattctcgcttgaaaggggaggag
ttccaataaccgaggagccatgaacaattgatcgtttccaggaagaggct
gttctttaagaacatggctcttaagctgggcatggtggcatatgctttta
atcccagcacttgggaggcagagacagtcggatttctgagttcgaggcca
gcatggtctacagagtgagttccaggacagccaggactacatagagaaac
cctgtctcgaaaaacaaagcaaaacaaaacaacaacaacaacaacaacaa
caacaacaacaacatcagaacatggctcttggtaggttgaccaagcttca
gtggatggtcccacatccacgagtacatgggcagtgcaaattgaagtcta
tgtatcatttaaaaaaaaagagacatgaagttgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_59460608_59461599
seq2: B6Ng01-018I05.b_46_1034

seq1  GAATTCCTGGGCTCTTCCTTTTTCCTTTCTTGTTCTCATGGTACTGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGCTCTTCCTTTTTCCTTTCTTGTTCTCATGGTACTGATGG  50

seq1  ACTCCAGCAAGAGTTGAGAGGCAGTCTCAGAACAATCTTATTTGGATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCAAGAGTTGAGAGGCAGTCTCAGAACAATCTTATTTGGATTTA  100

seq1  GTATTTAACTCTCAAACTTTCAGCTGATCTTTACTGCTAATGTTCATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAACTCTCAAACTTTCAGCTGATCTTTACTGCTAATGTTCATGTG  150

seq1  ATTTATCTGAAACAAACAAACAAACAAACTGGAAAAAGAAAATTTACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTGAAACAAACAAACAAACAAACTGGAAAAAGAAAATTTACCAG  200

seq1  CTCTGAGATGGTTTGTCTTGTGATAACTGAATACACACAGGGTCTCCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGATGGTTTGTCTTGTGATAACTGAATACACACAGGGTCTCCAGT  250

seq1  TCACTGTTTCTCAGCTAAAGGTATTAAACATTCTGCTCAGCATATGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTTTCTCAGCTAAAGGTATTAAACATTCTGCTCAGCATATGAGAA  300

seq1  TGAAGATGGATGGAATCCAATGGCTGCCCTAAGGCTCTGTTAGAATGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGGATGGAATCCAATGGCTGCCCTAAGGCTCTGTTAGAATGTGG  350

seq1  ACGCACCTAGATAAGTACCACGATGTGTGACAATCAGGACCCTGCCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACCTAGATAAGTACCACGATGTGTGACAATCAGGACCCTGCCAGGA  400

seq1  TCACATGGCAGTAGGCACAGTAAAGCTCACCTTATGAAAAAGAGGGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGCAGTAGGCACAGTAAAGCTCACCTTATGAAAAAGAGGGTGGC  450

seq1  TGGCCAGGGAAGTCTCTGGAAGAAGTGAGATCTAAGCCCTGGTATTAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGGGAAGTCTCTGGAAGAAGTGAGATCTAAGCCCTGGTATTAATC  500

seq1  CCTCTGGAGCTGCCATGATAATATCAGAAGTTGGGTGGCTGATCAAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGAGCTGCCATGATAATATCAGAAGTTGGGTGGCTGATCAAGGTA  550

seq1  CTGATGTATTTCCTCACAGTTCTGGGAAATGCTGGAAAGTTCAAGATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTATTTCCTCACAGTTCTGGGAAATGCTGGAAAGTTCAAGATAAA  600

seq1  TGTACTAGAAAAGTTGAAGTCTGCTGAGAACACACTTCCTGGTTCATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTAGAAAAGTTGAAGTCTGCTGAGAACACACTTCCTGGTTCATAGA  650

seq1  TTAATGCCTGTTCTGTGTCTCACATGGTAAAAGGCAGTGGGTCCCTTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCCTGTTCTGTGTCTCACATGGTAAAAGGCAGTGGGTCCCTTGGG  700

seq1  TCTCTTTTATGAGGACACTAATCCTGCTCATAACAGTTCTGTC-TTGATG  749
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTCTTTTATGAGGACACTAATCCTGCTCATAACAGTTCTGTCTTTGATG  750

seq1  AAGTAA-TTATACCCAAAGGCC-TCCCACCACCTGGGAGTGAGAC-TTTG  796
      |||||| ||||||||||||||| |||||||||||||||||||||| ||||
seq2  AAGTAATTTATACCCAAAGGCCTTCCCACCACCTGGGAGTGAGACTTTTG  800

seq1  TCATACAAAAGTGCAGAGGACTCA-TTTAGGCCACAGCTGCCCATAAGGA  845
      ||||||||||||||||| |||| | |||||||||||||||||||||||||
seq2  TCATACAAAAGTGCAGA-GACTTATTTTAGGCCACAGCTGCCCATAAGGA  849

seq1  TTTCTGTCCTTTCTGCAGTCACTGCCAGGCTAGTCAGGCCACACCTTTGT  895
      ||||||||||||||||||||||||||||| | |||| ||||| |||||||
seq2  TTTCTGTCCTTTCTGCAGTCACTGCCAGG-TTGTCA-GCCAC-CCTTTGT  896

seq1  GTTCTGAACTGTTGATCGCAACA-TGCTCTGAACCCTTGAGCCCTGCTTG  944
      ||| |||||||||||||| |||| || |||||||||||||||| || |||
seq2  GTT-TGAACTGTTGATCG-AACATTGTTCTGAACCCTTGAGCCTTG-TTG  943

seq1  TTCTGTCTCTGCTTATCACTCTACAAATCTCCCTTTACTTCCTTCTAA  992
       ||||||||||||| |||||||||||| |||| |||| | | ||||||
seq2  -TCTGTCTCTGCTT-TCACTCTACAAAACTCCGTTTATTCCTTTCTAA  989

seq1: chr1_84869970_84870121
seq2: B6Ng01-018I05.g_445_596 (reverse)

seq1  TTTTGTTTTTTTTCGAGACAGGAGACAGGGTTTCTCTGTGTAGCCCTGGC  50
      |||||||||  || |      |||||||||||||||| ||||| ||||||
seq2  TTTTGTTTTGCTTTGTTTTTCGAGACAGGGTTTCTCTATGTAGTCCTGGC  50

seq1  TGTCCTGGAACTCACTCTGCAGACCAGGCTGGCCTCAAACTCAGAAATCC  100
      ||||||||||||||||||| |||||| ||||||||| |||||||||||||
seq2  TGTCCTGGAACTCACTCTGTAGACCATGCTGGCCTCGAACTCAGAAATCC  100

seq1  GCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCATGCACCACCACGC  150
      | ||| ||||||||||||||||||||||||||| ||||   |||||| ||
seq2  GACTGTCTCTGCCTCCCAAGTGCTGGGATTAAAAGCATATGCCACCATGC  150

seq1  CC  152
      ||
seq2  CC  152