BAC Information

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BAC

Clone NameB6Ng01-019E09
Chromosome1 (Build37)
Map Location 67,680,613 - 67,817,443
singlet/doubletdoublet
Overlap genenone
Upstream geneRpe, 1110028C15Rik, Acadl, Myl1, LOC100043192, Lancl1, Cps1, Kif22-ps
Downstream geneErbb4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019E09.bB6Ng01-019E09.g
ACCDH852416DH852417
length971960
definitionDH852416|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E09, 5' end.DH852417|Mus musculus domesticus DNA, BAC clone: B6Ng01-019E09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,816,466 - 67,817,443)(67,680,613 - 67,681,577)
sequence
gaattcctcccgcctctgtcgcccaagtaccacgatttcaggtgtatatc
cccattcatctgaatctttaaacccacttctgttttgtgacctcatcaaa
acagtatttctcttaggaaagctagtcctactaatggagaataattccta
catttagtcatttctgatcttaataatgttctggcagttgcagaatgaca
tagacaaatgtaggcaatgcttttgtctcataaggatttatatcttttta
tggattgggtatcatttatgggtgagattgtagtctagttttatcaagcc
ctgtgttccatttctaaccttaaccctaacacaatatataccttatacag
aaattgtaagggcatcatttcaataaatggctaagggtgtacagtataat
tctactaaagttgacattggtgaagaaggaatggcaaatgaatgtgtact
acaaagaacaaaagtagtaatatcctgaccctagttatgaagaattttaa
aatattagaaatgtggcatttttattaaaatttaaaatatgcacactcga
caccaaataaatcaacagtgggtttcttttctcattttcatagcctgaag
gccagtgttcccaactgtacacaattttgctttgatagggcaataaaata
gaaatgcaaattacatgaaactctccaattagccagtcagatgcagatat
gggctactgtggctataataattccactgtgaattaaagccccaaataag
gggaatttcagaactatttcacagggttgtgaggaaaggccatgattccc
ccaacccgcctttttttttttggttgagtgcacactgaccagccttctga
gaagtaatttgatgctgagggttgttttgccttcagagaaggattagaga
tatggcaggtgctggttatgttgacgacatctgcatggatacattgcttt
tgtgctatctgctcctctcat
gaattctctgtttagctcttagatcccattttttgattgagttgtttggc
tttttggaggttagcttatagatcattttacatttacaggtctgagggat
aaggagactcaggctgttgtgttgaattattttgttataaataaaatatt
atttaagaaatctaatgacctgctgaaagtgattcattgtggcaggaatg
aacgtttaaataaaaactaatgcttatgaaagtattttttttttttagaa
aacttggagaaattacatatgacaaagcagagaagagaaggcactgtgta
aaactataaattctgggcctatgagcagaaatgtatcatccaatttaagc
tatcttgatatggcactgaaaagcattttgagaaagatatcttatgtgaa
tttttgaattgattactgacaatctcaaacaaatttgatatgggaagaat
acataaaacttgtacatgatataatttccgttttaatttagaaatatcac
attaagatgtgaataaaaaacatctttaatggtgcatgaggaatatgtgt
taatattaacacacacataacatgtgtactacctgtgtgtcttctagtat
aataagtctaaggacatgaatattaataaaattcaaagcaagataagcta
gctaaagttacctcttttagctgtgcactttagtgcacttaaaatgtatg
gccatctttaataaaaatctcttcgatgcacataaaataaaacatgtcca
cgtgaattatttgagggaagaaaataaaacaaagacaaagatgtaaaaag
agccagatacgaggtgagtattcactgtacaaggaccaagacactgcctg
gtgataattacactggctttaaatttaacaatcccattatgctggtacaa
atgtgttaacttcttcctctttccctttaagtaccttgcctttggcaaaa
gaattgaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_67816466_67817443
seq2: B6Ng01-019E09.b_45_1015 (reverse)

seq1  ATGAGA-GAGCAGATAAGCACAAAAGCAATGTATACATTGCAGATGTCTG  49
      |||||| |||||||| |||||||||||||||||| || |||||||||| |
seq2  ATGAGAGGAGCAGAT-AGCACAAAAGCAATGTATCCA-TGCAGATGTC-G  47

seq1  TCAACATAACCAGCACCTGCCATATCTCTAGATCCTTCCTCCTGATGGCA  99
      |||||||||||||||||||||||||||||| |||||||   |||| ||||
seq2  TCAACATAACCAGCACCTGCCATATCTCTA-ATCCTTC--TCTGAAGGCA  94

seq1  AAACAACCCTCAGCATCCAAATTACTTCTCAGAAGGCTGGTCAGTGTGCA  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAACAACCCTCAGCAT-CAAATTACTTCTCAGAAGGCTGGTCAGTGTGCA  143

seq1  CTCAACCAAAAAAAAAAAAAGGCGGGTTGGGGGAATCATGGCCTTTCCTC  199
      |||||||  |||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACC--AAAAAAAAAAAGGCGGGTTGGGGGAATCATGGCCTTTCCTC  191

seq1  ACAACCCTGTGAAATAGTTCTGAAATTCCCCTTATTTGGGGCTTTAATTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTGTGAAATAGTTCTGAAATTCCCCTTATTTGGGGCTTTAATTC  241

seq1  ACAGTGGAATTATTATAGCCACAGTAGCCCATATCTGCATCTGACTGGCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGAATTATTATAGCCACAGTAGCCCATATCTGCATCTGACTGGCT  291

seq1  AATTGGAGAGTTTCATGTAATTTGCATTTCTATTTTATTGCCCTATCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAGAGTTTCATGTAATTTGCATTTCTATTTTATTGCCCTATCAAA  341

seq1  GC-AAATTGTGTACAGTTGGGAACACTGGCCTTCAGGCTATGAAAATGAG  398
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATTGTGTACAGTTGGGAACACTGGCCTTCAGGCTATGAAAATGAG  391

seq1  AAAAGAAACCCACTGTTGATTTATTTGGTGTCGAGTGTGCATATTTTAAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACCCACTGTTGATTTATTTGGTGTCGAGTGTGCATATTTTAAA  441

seq1  TTTTAATAAAAATGCCACATTTCTAATATTTTAAAATTCTTCATAACTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAAAAATGCCACATTTCTAATATTTTAAAATTCTTCATAACTAG  491

seq1  GGTCAGGATATTACTACTTTTGTTCTTTGTAGTACACATTCATTTGCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGATATTACTACTTTTGTTCTTTGTAGTACACATTCATTTGCCAT  541

seq1  TCCTTCTTCACCAATGTCAACTTTAGTAGAATTATACTGTACACCCTTAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTCACCAATGTCAACTTTAGTAGAATTATACTGTACACCCTTAG  591

seq1  CCATTTATTGAAATGATGCCCTTACAATTTCTGTATAAGGTATATATTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTATTGAAATGATGCCCTTACAATTTCTGTATAAGGTATATATTGT  641

seq1  GTTAGGGTTAAGGTTAGAAATGGAACACAGGGCTTGATAAAACTAGACTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGTTAAGGTTAGAAATGGAACACAGGGCTTGATAAAACTAGACTA  691

seq1  CAATCTCACCCATAAATGATACCCAATCCATAAAAAGATATAAATCCTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCACCCATAAATGATACCCAATCCATAAAAAGATATAAATCCTTA  741

seq1  TGAGACAAAAGCATTGCCTACATTTGTCTATGTCATTCTGCAACTGCCAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAAAAGCATTGCCTACATTTGTCTATGTCATTCTGCAACTGCCAG  791

seq1  AACATTATTAAGATCAGAAATGACTAAATGTAGGAATTATTCTCCATTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTATTAAGATCAGAAATGACTAAATGTAGGAATTATTCTCCATTAG  841

seq1  TAGGACTAGCTTTCCTAAGAGAAATACTGTTTTGATGAGGTCACAAAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACTAGCTTTCCTAAGAGAAATACTGTTTTGATGAGGTCACAAAACA  891

seq1  GAAGTGGGTTTAAAGATTCAGATGAATGGGGATATACACCTGAAATCGTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGTTTAAAGATTCAGATGAATGGGGATATACACCTGAAATCGTG  941

seq1  GTACTTGGGCGACAGAGGCGGGAGGAATTC  978
      ||||||||||||||||||||||||||||||
seq2  GTACTTGGGCGACAGAGGCGGGAGGAATTC  971

seq1: chr1_67680613_67681577
seq2: B6Ng01-019E09.g_69_1028

seq1  GAATTCTCTGTTTAGCTCTTAGATCCCATTTTTTGATTGAGTTGTTTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTTAGATCCCATTTTTTGATTGAGTTGTTTGGC  50

seq1  TTTTTGGAGGTTAGCTTATAGATCATTTTACATTTACAGGTCTGAGGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAGGTTAGCTTATAGATCATTTTACATTTACAGGTCTGAGGGAT  100

seq1  AAGGAGACTCAGGCTGTTGTGTTGAATTATTTTGTTATAAATAAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGACTCAGGCTGTTGTGTTGAATTATTTTGTTATAAATAAAATATT  150

seq1  ATTTAAGAAATCTAATGACCTGCTGAAAGTGATTCATTGTGGCAGGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGAAATCTAATGACCTGCTGAAAGTGATTCATTGTGGCAGGAATG  200

seq1  AACGTTTAAATAAAAACTAATGCTTATGAAAGTATTTTTTTTTTTTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTTAAATAAAAACTAATGCTTATGAAAGTATTTTTTTTTTTTAGAA  250

seq1  AACTTGGAGAAATTACATATGACAAAGCAGAGAAGAGAAGGCACTGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGGAGAAATTACATATGACAAAGCAGAGAAGAGAAGGCACTGTGTA  300

seq1  AAACTATAAATTCTGGGCCTATGAGCAGAAATGTATCATCCAATTTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAAATTCTGGGCCTATGAGCAGAAATGTATCATCCAATTTAAGC  350

seq1  TATCTTGATATGGCACTGAAAAGCATTTTGAGAAAGATATCTTATGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGATATGGCACTGAAAAGCATTTTGAGAAAGATATCTTATGTGAA  400

seq1  TTTTTGAATTGATTACTGACAATCTCAAACAAATTTGATATGGGAAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAATTGATTACTGACAATCTCAAACAAATTTGATATGGGAAGAAT  450

seq1  ACATAAAACTTGTACATGATATAATTTCCGTTTTAATTTAGAAATATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAACTTGTACATGATATAATTTCCGTTTTAATTTAGAAATATCAC  500

seq1  ATTAAGATGTGAATAAAAAACATCTTTAATGGTGCATGAGGAATATGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATGTGAATAAAAAACATCTTTAATGGTGCATGAGGAATATGTGT  550

seq1  TAATATTAACACACACATAACATGTGTACTACCTGTGTGTCTTCTAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAACACACACATAACATGTGTACTACCTGTGTGTCTTCTAGTAT  600

seq1  AATAAGTCTAAGGACATGAATATTAATAAAATTCAAAGCAAGATAAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTCTAAGGACATGAATATTAATAAAATTCAAAGCAAGATAAGCTA  650

seq1  GCTAAAGTTACCTC-TTTAGCTGTGCACTTTAGTGCACTTAAAATGTATG  699
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCTAAAGTTACCTCTTTTAGCTGTGCACTTTAGTGCACTTAAAATGTATG  700

seq1  GCCATCTTTAAT-AAAATCTCTTCGATGCACATAAAATAAAACATGTCCA  748
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTTAATAAAAATCTCTTCGATGCACATAAAATAAAACATGTCCA  750

seq1  CGTGAATTATTTGAGGGAAGAAAATAAAACAAAGACAAAGATGTAAAAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAATTATTTGAGGGAAGAAAATAAAACAAAGACAAAGATGTAAAAAG  800

seq1  AGCCAGATACGAGGTGAGTATTCACTGTACAAGGACCAAGACACTGCCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGATACGAGGTGAGTATTCACTGTACAAGGACCAAGACACTGCCTG  850

seq1  GTGATAATTACACTGGCTTTAAATTTTAACAATCTCATTATGCTTGGTAC  898
      ||||||||||||||||||||||| |||||||||| |||||||| ||||||
seq2  GTGATAATTACACTGGCTTTAAA-TTTAACAATCCCATTATGC-TGGTAC  898

seq1  AAATGTGTTAACATTCTTCCTCTTTTCACTTTTAAGATCCTTGCCTTTTG  948
      |||||||||||| ||||||||||||   | ||||||  ||||||| ||||
seq2  AAATGTGTTAAC-TTCTTCCTCTTT--CCCTTTAAGTACCTTGCC-TTTG  944

seq1  TCAAAAGAATTTGAGGT  965
       |||||||| |||||||
seq2  GCAAAAGAA-TTGAGGT  960