BAC Information

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BAC

Clone NameB6Ng01-019G15
Chromosome1 (Build37)
Map Location 149,152,826 - 149,300,969
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019G15.bB6Ng01-019G15.g
ACCDH852504DH852505
length5921,084
definitionDH852504|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G15, 5' end.DH852505|Mus musculus domesticus DNA, BAC clone: B6Ng01-019G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,300,374 - 149,300,969)(149,152,826 - 149,153,923)
sequence
cactgatgttcccacccgacaaactttgtaagcagagaagaagcttcaat
ggactccttgtgggtcatctaatttatattaggtttccatgtaaggtttt
gaaaatgacaatgtagtgatagtagacagaggagataaccacacttgaaa
accactttcaatagaagaacaataatggattacagtagtaatagttttgt
ctactgtttcataaagcattacaccggacatgtggaaaagggaggagggg
aagggtgataaggggaaagaaccgttgttattctgaagtgtatgaggaac
actagagaattataccacacataccatgcatgaggaagctgacttataat
atctggtttatagttctgctatgattatcatgtttatgttagatctgtcc
tttattagttgggtccagattacatccattttcttcattatgtttttgga
tatttctcttcatttatttcactaatgggaattttattttcatcaaatac
aagaatatcattaaagaggttctaagggtcttcagatatttatgaattac
aaacatacatataagccagaaggaagggcacatgccatcaat
gaattcaactggggtcctcttcaagagcagcacatgctgataattgctgc
cttatatctatctctataattctgagagtatgctattttgaatacaacaa
atgcttcttccttaaaattctttttgattatttttaattgacttaaacaa
tctaccacttgtaaaaaaaagaaatgggtaaacgaaacattttggaacac
tgagatgatacaccttaaactacagcttaaaagcattttgtttgttgatg
tttgatgtttgctttaatgtatttaatgtataatataatatatattttta
ctactattcttgagaaaatttcttaggagcctagcagcctagaaaaaata
tagattaatataagttaataataaaaataattataagataatttcaatat
aaattaatatattgaataaatatatttacccaatttatttgaaaaataga
tatttcttatcagaaataatcaagtaaaagcttcctgtgtccagttgcat
cagttatgaaattacataatattttttaaatctgcttaacaaatggaagt
aaaatataaaactctggatttcttaatctccttctaagagaaaactgtag
ctttctgatttacatcgctggagaattagagattcgcttcccttttgttt
tcttaattgctttaatctgaagagataatagactttgtcttgtatctgga
agagtctcaacagagccaagaatagaccccattactaacctccagggcac
taaaaagaatgaatggagggctagtctcaaagcatttgcacttgtgaata
aaatctttggggcccccacactaagaaacctattgggtagcctaagactg
gtttgctccagtagtttctatgtcatactaaaggtctggtattaaaaccc
taggccttaaagatttccttctgatcagagggatagcatcctccatccat
aaattgtagtgaaaatgatttctatacctttaaccatggggtgcccacct
acttttagtgaaaaacatatttctctttaaatttccccgaatgaaactga
ggaaatacaggatgaggaatgctattacttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_149300374_149300969
seq2: B6Ng01-019G15.b_46_643 (reverse)

seq1  ATTGATGGCATGTGCCCTTCCTTCTGGCTT-TATGTATGTTTGTAATTCA  49
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTGATGGCATGTGCCCTTCCTTCTGGCTTATATGTATGTTTGTAATTCA  50

seq1  TATATATCTGAAGACCCTTAGAACCTCTTTAATGATATTCTTGTATTTGA  99
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATCTGAAGACCCTTAGAACCTCTTTAATGATATTCTTGTATTTGA  100

seq1  TGAAAATAAAATTCCCATTAGTGAAATAAATG-AGAGAAATATCCAAAAA  148
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGAAAATAAAATTCCCATTAGTGAAATAAATGAAGAGAAATATCCAAAAA  150

seq1  CATAATGAAGAAAATGGATGTAATCTGGACCCAGCTACTTAAGGACAGAT  198
      ||||||||||||||||||||||||||||||||| ||| | ||||||||||
seq2  CATAATGAAGAAAATGGATGTAATCTGGACCCAACTAATAAAGGACAGAT  200

seq1  CTAACATAAACATGATAATCATAGCAGAACTATAAACCAGATATTATAAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAAACATGATAATCATAGCAGAACTATAAACCAGATATTATAAG  250

seq1  TCAGCTTCCTCATGCATGGTATGTGTGGTATAATTCTCTAGTGTTCCTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCTCATGCATGGTATGTGTGGTATAATTCTCTAGTGTTCCTCA  300

seq1  TACACTTCAGAATAACAACGGTTCTTTCCCCTTATCACCCTTCCCCTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTCAGAATAACAACGGTTCTTTCCCCTTATCACCCTTCCCCTCCT  350

seq1  CCCTTTTCCACATGTCCGGTGTAATGCTTTATGAAACAGTAGACAAAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTCCACATGTCCGGTGTAATGCTTTATGAAACAGTAGACAAAACT  400

seq1  ATTACTACTGTAATCCATTATTGTTCTTCTATTGAAAGTGGTTTTCAAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTACTGTAATCCATTATTGTTCTTCTATTGAAAGTGGTTTTCAAGT  450

seq1  GTGGTTATCTCCTCTGTCTACTATCACTACATTGTCATTTTCAAAACCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTATCTCCTCTGTCTACTATCACTACATTGTCATTTTCAAAACCTT  500

seq1  ACATGGAAACCTAATATAAATTAGATGACCCACAAGGAGTCCATTGAAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAAACCTAATATAAATTAGATGACCCACAAGGAGTCCATTGAAGC  550

seq1  TTCTTCTCTGCTTACAAAGTTTGTCGGGTGGGAACATCAGTGGAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTGCTTACAAAGTTTGTCGGGTGGGAACATCAGTGGAATTC  598

seq1: chr1_149152826_149153923
seq2: B6Ng01-019G15.g_68_1151

seq1  GAATTCAACTGGGGTCCTCTTCAAGAGCAGCACATGCTGATAATTGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGGGTCCTCTTCAAGAGCAGCACATGCTGATAATTGCTGC  50

seq1  CTTATATCTATCTCTATAATTCTGAGAGTATGCTATTTTGAATACAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATCTATCTCTATAATTCTGAGAGTATGCTATTTTGAATACAACAA  100

seq1  ATGCTTCTTCCTTAAAATTCTTTTTGATTATTTTTAATTGACTTAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCTTCCTTAAAATTCTTTTTGATTATTTTTAATTGACTTAAACAA  150

seq1  TCTACCACTTGTAAAAAAAAGAAATGGGTAAACGAAACATTTTGGAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCACTTGTAAAAAAAAGAAATGGGTAAACGAAACATTTTGGAACAC  200

seq1  TGAGATGATACACCTTAAACTACAGCTTAAAAGCATTTTGTTTGTTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGATACACCTTAAACTACAGCTTAAAAGCATTTTGTTTGTTGATG  250

seq1  TTTGATGTTTGCTTTAATGTATTTAATGTATAATATAATATATATTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGTTTGCTTTAATGTATTTAATGTATAATATAATATATATTTTTA  300

seq1  CTACTATTCTTGAGAAAATTTCTTAGGAGCCTAGCAGCCTAGAAAAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTCTTGAGAAAATTTCTTAGGAGCCTAGCAGCCTAGAAAAAATA  350

seq1  TAGATTAATATAAGTTAATAATAAAAATAATTATAAGATAATTTCAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAATATAAGTTAATAATAAAAATAATTATAAGATAATTTCAATAT  400

seq1  AAATTAATATATTGAATAAATATATTTACCCAATTTATTTGAAAAATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATATATTGAATAAATATATTTACCCAATTTATTTGAAAAATAGA  450

seq1  TATTTCTTATCAGAAATAATCAAGTAAAAGCTTCCTGTGTCCAGTTGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTATCAGAAATAATCAAGTAAAAGCTTCCTGTGTCCAGTTGCAT  500

seq1  CAGTTATGAAATTACATAATATTTTTTAAATCTGCTTAACAAATGGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATGAAATTACATAATATTTTTTAAATCTGCTTAACAAATGGAAGT  550

seq1  AAAATATAAAACTCTGGATTTCTTAATCTCCTTCTAAGAGAAAACTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAAACTCTGGATTTCTTAATCTCCTTCTAAGAGAAAACTGTAG  600

seq1  CTTTCTGATTTACATCGCTGGAGAATTAGAGATTCGCTTCCCTTTTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGATTTACATCGCTGGAGAATTAGAGATTCGCTTCCCTTTTGTTT  650

seq1  TCTTAATTGCTTTAATCTGAAGAGATAATAGACTTTGTCTTGTATCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTGCTTTAATCTGAAGAGATAATAGACTTTGTCTTGTATCTGGA  700

seq1  AGAGTCTCAACAGAGCCAAGAATAGACCCCATTACTAACCTCCAGGGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTCAACAGAGCCAAGAATAGACCCCATTACTAACCTCCAGGGCAC  750

seq1  TAAAAAGAATGAATGGAGGGCTAGTCTCAAAGCATTTGCACTTGTGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAATGAATGGAGGGCTAGTCTCAAAGCATTTGCACTTGTGAATA  800

seq1  AAATCTTTGGGGCCCCCACACTAAGAAACCTATTGGGTAGCCTAAGACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGGGGCCCCCACACTAAGAAACCTATTGGGTAGCCTAAGACTG  850

seq1  GTTTGCTCCAGTAGTTTCTATGTACATACTAAAGGTCTGGTATTAAAACC  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTTGCTCCAGTAGTTTCTATGT-CATACTAAAGGTCTGGTATTAAAACC  899

seq1  CTAGGCCCTTAAAGATTTCCTCCTGATCAGTAGGGATAGCATCCTCATTC  950
      ||||| ||||||||||||||| |||||||| |||||||||||||||  ||
seq2  CTAGG-CCTTAAAGATTTCCTTCTGATCAG-AGGGATAGCATCCTCCATC  947

seq1  CATAATATGTAGTGAAAATGATTTCTATAACCTTAAACTATGGGGTGCCC  1000
      |||||  ||||||||||||||||||||| ||||| ||| |||||||||||
seq2  CATAAATTGTAGTGAAAATGATTTCTAT-ACCTTTAACCATGGGGTGCCC  996

seq1  AACTACTTTAGTA-TGAAAAACAATAATTCTCATTTAAAATTTCCCCCAG  1049
      | |||||||  || |||||||| ||| |||||  || ||||||||||   
seq2  ACCTACTTT--TAGTGAAAAAC-ATATTTCTC--TTTAAATTTCCCC---  1038

seq1  AAATGAAACTGAGGAAAATACCAGGATGAGGAATTGCTATTACTTTTGA  1098
       ||||||||||||| ||||| |||||||||||| |||||||||||||||
seq2  GAATGAAACTGAGG-AAATA-CAGGATGAGGAA-TGCTATTACTTTTGA  1084