BAC Information

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BAC

Clone NameB6Ng01-020B18
Chromosome1 (Build37)
Map Location 62,549,644 - 62,688,733
singlet/doubletdoublet
Overlap genePard3b
Upstream genenone
Downstream geneLOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik, 4930431J08Rik, LOC667644, LOC100042638, Adam23, Gm215
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-020B18.bB6Ng01-020B18.g
ACCDH853001DH853002
length1,1211,058
definitionDH853001|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B18, 5' end.DH853002|Mus musculus domesticus DNA, BAC clone: B6Ng01-020B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,687,595 - 62,688,733)(62,549,644 - 62,550,712)
sequence
gaattcactctccgtccccatatgccaaagtatgatttcacataatttat
ctttagaacatatgaacagatgacttggtaatcataaaagaacaggaaag
acgagagaaagcgagggtataaacaacaggttttgttttatgttccagta
gtaaatagctttgcagatggaacggaacactttctgaagagcagatcaag
agatgggctcaaagagtctgtgggaatggttcacttctcaatctgagctt
agtagccaaccccaacttttaaaagccaggctgtgggcgactgcatggct
atttaaggaaaggaggaagaaagagttgcacctggaagccacagttgcat
gtgagagtcctggcttattttagatctctatttttcctcctttctatcgg
aaaggtgactctgtagggatatcttatgaagaattttctgtctcactgta
gccttgtttccaccctaagttggcatgaactgaggcagcagaggaacact
attatggacttttctgaatggaacaccctcctgcctaattgcattaaact
tggactttctgttcacatggacccaggaagcactgggacgtctacccaat
ttaacgccagtttgaaagctgctcacagtggatctcagtgttcagtgctg
atgggaattctcagacacacattcctgtatcaaccactttccaattcctt
ccacgggcctgaaattctataacattgctcaaacactaaacagaaaacaa
acgaaaacaaatgcaggtgatttccagtgaggggaaaagtaatcactctt
tttaggtttggtctctctgtggaccagggaacagagaaatcagctctctg
atcttcctgaagttgcagaggatttccttcacaaggtaggtttagcttta
aaagaaaaaaaaatcaaggcagtggtcttatttaatttattctgttggta
gcagaaatgagctccacaaagcctccaagctcgcttctctacaatgctat
tgaatcatcagcttttgctccatgtggccctgtggttccacatagatgtt
ctgaagttgagaataatgagttcggttattttttctctctcagcttgttt
gctatgaaataatgaatgaag
gaattcatttgggagtactcaactgaggcaagggacagttctatttgtgt
catcactggatagcccgaatggccatggcccagccagacactgtttggag
acctttgaaaagggagaataatgtgagttaacatttcgctgcacattaat
tctttataaaaaataaagctgtagtttaattttaaatgctaatatgcata
tggttaattaagaagccaaaattggctataagcttggtgagcgctaggag
cgggggagcgagatcattacacttctgctcatggttagctatttgtgaac
cagctgataatgtgcagaattaagatttcgtaagtggcattttaaatgaa
tggttaatggctgaagattaattaaacagtcagagttactgaagaaaagc
tgttaaaaaattatgtttataggccagtcacttgcacactgaaacagaag
tcctgatagcgatagcctttgtgtgtaccaagaacattttaaagaagtgg
acttcatcaggagagaagcccagcttggcagagctgtggcagttgcctca
gggatagtcctttggaggaaaagctgctgtgtaggaaaatagactagaaa
gtgtttttatggaaggagtcttcactgaaacctccgtggcaggtaaccag
gcatattttatttcctacctgcatgctgcacatgctgagttagagtaggc
agaacccatgggatctataagaagactctatgatgctgggaacagacacg
gaattgccctgtattgttttcagcccaagctggtccttcttaagtctcca
gctcttggtgctgggaacatgggttttatgtgtctggctctaccctaggc
tgattcactggggatccattttctttgtattcagtgctatgctgtgctca
tagaagatgctgtaaaaatatttttttaaaattacttgccatagcttact
cataaatattggacaaatgaatatgagttacttaggggtggtgattagga
catcaaagctctttaaatatccctcatccttcagcaaacgaagtatctgg
tactgacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_62687595_62688733
seq2: B6Ng01-020B18.b_43_1163 (reverse)

seq1  CTTCAATCATTATTTCATAGCAAACAAAGCTGAGAGGAAAAAAATAAACC  50
      ||||| ||||||||||||||||||| ||||||||||  |||||||||  |
seq2  CTTCATTCATTATTTCATAGCAAAC-AAGCTGAGAGAGAAAAAATAA--C  47

seq1  CGAAACTCATTATTCTTCAACTTTCAGAACATCTATGTGGAACCCACAGG  100
      || |||||||||||| ||||| |||||||||||||||||||| |||||||
seq2  CG-AACTCATTATTC-TCAAC-TTCAGAACATCTATGTGGAA-CCACAGG  93

seq1  GCCACATGGAGCAAAAGGCTGATGAATTCAATAGCATTGTAGAGAAGCGG  150
      |||||||||||||||| ||||||| ||||||||||||||||||||||| |
seq2  GCCACATGGAGCAAAA-GCTGATG-ATTCAATAGCATTGTAGAGAAGC-G  140

seq1  AGCCTTGGAGGCTTTGTGGAGCCTCATTTCTGCTACCAACAGAATAAAAT  200
      || |||||||||||||||||| ||||||||||||||||||||||||||  
seq2  AG-CTTGGAGGCTTTGTGGAG-CTCATTTCTGCTACCAACAGAATAAA--  186

seq1  TAAAATAAGACCCACTGCCTTGATTTTTTTTTTCCTTTTAAAGCTAAACC  250
      | |||||||| |||||||||||||||||||||  ||||||||||||||||
seq2  TTAAATAAGA-CCACTGCCTTGATTTTTTTTT--CTTTTAAAGCTAAACC  233

seq1  TACCTTGTGAAGGAAATCCTCCTGCAACTTCAGGAAGATCAGAGAGCTGA  300
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TACCTTGTGAAGGAAATCCT-CTGCAACTTCAGGAAGATCAGAGAGCTGA  282

seq1  TTTCTCTGTTCCCTGGTCCACAGAGAGACCAAACCTAAAAAGAGTGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTTCCCTGGTCCACAGAGAGACCAAACCTAAAAAGAGTGATTA  332

seq1  CTTTTCCCCTCACTGGAAATCACCTGCATTTGTTTTCGTTTGTTTTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCTCACTGGAAATCACCTGCATTTGTTTTCGTTTGTTTTCTGT  382

seq1  TTAGTGTTTGAGCAATGTTATAGAATTTCAGGCCCGTGGAAGGAATTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTTGAGCAATGTTATAGAATTTCAGGCCCGTGGAAGGAATTGGA  432

seq1  AAGTGGTTGATACAGGAATGTGTGTCTGAGAATTCCCATCAGCACTGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTGATACAGGAATGTGTGTCTGAGAATTCCCATCAGCACTGAAC  482

seq1  ACTGAGATCCACTGTGAGCAGCTTTCAAACTGGCGTTAAATTGGGTAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATCCACTGTGAGCAGCTTTCAAACTGGCGTTAAATTGGGTAGAC  532

seq1  GTCCCAGTGCTTCCTGGGTCCATGTGAACAGAAAGTCCAAGTTTAATGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAGTGCTTCCTGGGTCCATGTGAACAGAAAGTCCAAGTTTAATGCA  582

seq1  ATTAGGCAGGAGGGTGTTCCATTCAGAAAAGTCCATAATAGTGTTCCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGCAGGAGGGTGTTCCATTCAGAAAAGTCCATAATAGTGTTCCTCT  632

seq1  GCTGCCTCAGTTCATGCCAACTTAGGGTGGAAACAAGGCTACAGTGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTCAGTTCATGCCAACTTAGGGTGGAAACAAGGCTACAGTGAGAC  682

seq1  AGAAAATTCTTCATAAGATATCCCTACAGAGTCACCTTTCCGATAGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTCTTCATAAGATATCCCTACAGAGTCACCTTTCCGATAGAAAG  732

seq1  GAGGAAAAATAGAGATCTAAAATAAGCCAGGACTCTCACATGCAACTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAATAGAGATCTAAAATAAGCCAGGACTCTCACATGCAACTGTG  782

seq1  GCTTCCAGGTGCAACTCTTTCTTCCTCCTTTCCTTAAATAGCCATGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAGGTGCAACTCTTTCTTCCTCCTTTCCTTAAATAGCCATGCAGT  832

seq1  CGCCCACAGCCTGGCTTTTAAAAGTTGGGGTTGGCTACTAAGCTCAGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCACAGCCTGGCTTTTAAAAGTTGGGGTTGGCTACTAAGCTCAGATT  882

seq1  GAGAAGTGAACCATTCCCACAGACTCTTTGAGCCCATCTCTTGATCTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGAACCATTCCCACAGACTCTTTGAGCCCATCTCTTGATCTGCT  932

seq1  CTTCAGAAAGTGTTCCGTTCCATCTGCAAAGCTATTTACTACTGGAACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAAGTGTTCCGTTCCATCTGCAAAGCTATTTACTACTGGAACAT  982

seq1  AAAACAAAACCTGTTGTTTATACCCTCGCTTTCTCTCGTCTTTCCTGTTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACCTGTTGTTTATACCCTCGCTTTCTCTCGTCTTTCCTGTTC  1032

seq1  TTTTATGATTACCAAGTCATCTGTTCATATGTTCTAAAGATAAATTATGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGATTACCAAGTCATCTGTTCATATGTTCTAAAGATAAATTATGT  1082

seq1  GAAATCATACTTTGGCATATGGGGACGGAGAGTGAATTC  1139
      |||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATACTTTGGCATATGGGGACGGAGAGTGAATTC  1121

seq1: chr1_62549644_62550712
seq2: B6Ng01-020B18.g_67_1124

seq1  GAATTCATTTGGGAGTACTCAACTGAGGCAAGGGACAGTTCTATTTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGGGAGTACTCAACTGAGGCAAGGGACAGTTCTATTTGTGT  50

seq1  CATCACTGGATAGCCCGAATGGCCATGGCCCAGCCAGACACTGTTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGGATAGCCCGAATGGCCATGGCCCAGCCAGACACTGTTTGGAG  100

seq1  ACCTTTGAAAAGGGAGAATAATGTGAGTTAACATTTCGCTGCACATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGAAAAGGGAGAATAATGTGAGTTAACATTTCGCTGCACATTAAT  150

seq1  TCTTTATAAAAAATAAAGCTGTAGTTTAATTTTAAATGCTAATATGCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAAAAAATAAAGCTGTAGTTTAATTTTAAATGCTAATATGCATA  200

seq1  TGGTTAATTAAGAAGCCAAAATTGGCTATAAGCTTGGTGAGCGCTAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATTAAGAAGCCAAAATTGGCTATAAGCTTGGTGAGCGCTAGGAG  250

seq1  CGGGGGAGCGAGATCATTACACTTCTGCTCATGGTTAGCTATTTGTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGAGCGAGATCATTACACTTCTGCTCATGGTTAGCTATTTGTGAAC  300

seq1  CAGCTGATAATGTGCAGAATTAAGATTTCGTAAGTGGCATTTTAAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGATAATGTGCAGAATTAAGATTTCGTAAGTGGCATTTTAAATGAA  350

seq1  TGGTTAATGGCTGAAGATTAATTAAACAGTCAGAGTTACTGAAGAAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAATGGCTGAAGATTAATTAAACAGTCAGAGTTACTGAAGAAAAGC  400

seq1  TGTTAAAAAATTATGTTTATAGGCCAGTCACTTGCACACTGAAACAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAAAATTATGTTTATAGGCCAGTCACTTGCACACTGAAACAGAAG  450

seq1  TCCTGATAGCGATAGCCTTTGTGTGTACCAAGAACATTTTAAAGAAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGATAGCGATAGCCTTTGTGTGTACCAAGAACATTTTAAAGAAGTGG  500

seq1  ACTTCATCAGGAGAGAAGCCCAGCTTGGCAGAGCTGTGGCAGTTGCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATCAGGAGAGAAGCCCAGCTTGGCAGAGCTGTGGCAGTTGCCTCA  550

seq1  GGGATAGTCCTTTGGAGGAAAAGCTGCTGTGTAGGAAAATAGACTAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGTCCTTTGGAGGAAAAGCTGCTGTGTAGGAAAATAGACTAGAAA  600

seq1  GTGTTTTTATGGAAGGAGTCTTCACTGAAACCTCCGTGGCAGGTAACCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTATGGAAGGAGTCTTCACTGAAACCTCCGTGGCAGGTAACCAG  650

seq1  GCATATTTTATTTCCTACCTGCATGCTGCACATGCTGAGTTAGAGTAGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTTATTTCCTACCTGCATGCTGCACATGCTGAGTTAGAGTAGGC  700

seq1  AGAACCCATGGGATCTATAAGAAGACTCTATGATGCTGGGAACAGACACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCATGGGATCTATAAGAAGACTCTATGATGCTGGGAACAGACACG  750

seq1  GAATTGCCCTGTATTGTTTTCAGCCCAAGCTGGTCCTTCTTAAGTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCCCTGTATTGTTTTCAGCCCAAGCTGGTCCTTCTTAAGTCTCCA  800

seq1  GCTCTTGGTGCTGGGAACATGGGTTTTATGTGTCTGGCTCTACCCTAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGTGCTGGGAACATGGGTTTTATGTGTCTGGCTCTACCCTAGGC  850

seq1  TGATTCACTGGGGATCCATTTTCCTTTGTATTCAGTGCTATGCTGTGCTC  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TGATTCACTGGGGATCCATTTT-CTTTGTATTCAGTGCTATGCTGTGCTC  899

seq1  ATAGAAGATGCTGTAAAAAATATTTTTTTAAAAATTACTTGCCATAGCTT  950
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  ATAGAAGATGCTGT-AAAAATATTTTTTT-AAAATTACTTGCCATAGCTT  947

seq1  AACTCAATAAATATTGGACAAATGAATAATGAGTTACTTAGGGGTTGGTG  1000
       |||| ||||||||||||||||||||| |||||||||||||||| |||||
seq2  -ACTC-ATAAATATTGGACAAATGAAT-ATGAGTTACTTAGGGG-TGGTG  993

seq1  ATTAGGACATCAAAGGCTCCTTTAAATACTCCTCCATCCATCCAGCAAAC  1050
      |||||||||||||| ||| ||||||||| |||  ||||| | ||||||||
seq2  ATTAGGACATCAAA-GCT-CTTTAAATA-TCCCTCATCC-TTCAGCAAAC  1039

seq1  GAAGTATCCTGTACTGACC  1069
      ||||||||  |||||||||
seq2  GAAGTATCTGGTACTGACC  1058