BAC Information

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BAC

Clone NameB6Ng01-022E20
Chromosome1 (Build37)
Map Location 176,094,847 - 176,095,892
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1406, Olfr218, Olfr1405-ps1, Olfr1404, Fcer1a, Olfr1403, Darc, Cadm3, Aim2, EG240921, BC094916, LOC623121, AI447904, E430029J22Rik, LOC665972, AI607873, Ifi204, EG666028, LOC100040462, Mnda, Ifi203, Ifi202b, Ifi205, Olfr433, Olfr432, GA_x5J8B7W3B3M-30314-31216, Olfr430, Olfr429, Olfr426, Olfr1528-ps1, Olfr244, Olfr424, Olfr423-ps1, Olfr421, Olfr422-ps1, Olfr420
Downstream geneSpna1, Olfr419, 1810030J14Rik, Olfr417, GA_x5J8B7W3B3M-312879-313274, GA_x5J8B7W3B3M-318013-318414, Olfr415, Olfr414, Olfr220, Fmn2, Grem2, Rgs7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022E20.bB6Ng01-022E20.g
ACCDH854561DH854562
length9391,029
definitionDH854561|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E20, 5' end.DH854562|Mus musculus domesticus DNA, BAC clone: B6Ng01-022E20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatacttgcctagttgtaaacactttggtagttgccgtgcttgg
tgttctctgaggttagtgaattatgtagtttacaaggaaccttgggaaat
tccattttatttcttcaaatttccattttgatttttcttctcctactggt
cttccaattatacatatgttacaccttttgaaattggcccacagttctca
aatgtacatctttctttctctctctttttgcttttgggtttttttctttt
tgcatctccttgtagaaatgttagtctatttcatgattcatgctaactgc
tgctttttctagtcacatacagtctattcaatgagaccaataagcattca
gttttccacctctgctacctatcctaaaaccagtaacctggaaactataa
tatatacacagaggacctgatgcagacttgtgcagtcctggtgaatgctg
ccccaatctctgtgaatactgccctagtctctgagttcatatgaaatttg
catatgccgatttagagggcttcctttccttggtttcctccatttcccct
ggctctaacactctttccacctcctctcctgtagggttctgttcaggata
ctttagtggtctgggtattttatgcttccatgtaaattgtaagttttttg
tcttttagtttctatttcactgaagaatgtcatgggatctcaatcaatct
ataaattactattgatagaacgtcattttcacaatattaaatataccact
gcttgagaattgggggattttccatattctaacatcttcctcggtttctt
tcattggagatttaagctttcattgtatgaatctctacttggatatattt
attcctaaatgttttatttaattttttgagtcatttgggatgggattctt
tccatgtttctttcttattgtgttggatactagtatata
gaattcctaccattaatgttagcattctcactgttatgtaacagtatgta
actgctaataaaatacacgtaagaatggttgtgccctctaaattctccta
aggatgtcctagagaagcagttgcactagcctggcatgtgtggggctcac
aaccaaacagtattaattacttttctattgctgtgacaaaatgctatgac
taaaacaactgctagatgagagagtttgtggtttatagttccaaagggtt
agagtccatgatgaagaagcagaggcagtagttgccagccatggcagctg
gagcagtaagcagggaattcacatcttaaaccacacacgtgaagcagaga
aagagaaagcaaaatggcacgagtctttaaattctcaaagcctgcttcca
atgacatactttctccagtgagaccacttctcctaaacttcccatatagc
agtaccaactagggatcaaagactagggaagacattttatttaaagcatc
acaaacaccaaaaaaggaaaccaaatcttggcactagatattttatttgt
tggcctgtggtatctagcagggcctttgtcaccaaacccccataatggat
tacctttatttaaagtacatgtgtacctatgtattttatgaagcttctat
agtaatgtttccatataactcagacaactcagtgttgtttttcctcctta
tccttcttgtaccttgccatttcctaccccaatttaaccttcctgctctc
taatccctattaactctttatgccacagcattctttctctcctaacttga
aaagtcctcattccgatggcgctgtattagttcccgactccagcagggat
gaaacatggatgtctttttgttttaatggctatttatttattacatttca
atgtatcccctatcccataccccctccccctgcttcttgaagtgtgcttc
ccacccactcctcattcctgtctacccacttgcattcctcactataatgg
ggcatcgagctctcaaatgaccaggcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_176094847_176095892
seq2: B6Ng01-022E20.g_67_1095

seq1  GAATTCCTACCATTAATGTTAGCATTCTCACTGTTATGTAACAGTATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACCATTAATGTTAGCATTCTCACTGTTATGTAACAGTATGTA  50

seq1  ACTGCTAATAAAATACACGTAAGAATGGTTGTGCCCTCTAAATTCTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAATAAAATACACGTAAGAATGGTTGTGCCCTCTAAATTCTCCTA  100

seq1  AGGATGTCCTAGAGAAGCAGTTGCACTAGCCTGGCATGTGTGGGGCTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTCCTAGAGAAGCAGTTGCACTAGCCTGGCATGTGTGGGGCTCAC  150

seq1  AACCAAACAGTATTAATTACTTTTCTATTGCTGTGACAAAATGCTATGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACAGTATTAATTACTTTTCTATTGCTGTGACAAAATGCTATGAC  200

seq1  TAAAACAACTGCTAGATGAGAGAGTTTGTGGTTTATAGTTCCAAAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACTGCTAGATGAGAGAGTTTGTGGTTTATAGTTCCAAAGGGTT  250

seq1  AGAGTCCATGATGAAGAAGCAGAGGCAGTAGTTGCCAGCCATGGCAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCATGATGAAGAAGCAGAGGCAGTAGTTGCCAGCCATGGCAGCTG  300

seq1  GAGCAGTAAGCAGGGAATTCACATCTTAAACCACACACGTGAAGCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAAGCAGGGAATTCACATCTTAAACCACACACGTGAAGCAGAGA  350

seq1  AAGAGAAAGCAAAATGGCACGAGTCTTTAAATTCTCAAAGCCTGCTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAGCAAAATGGCACGAGTCTTTAAATTCTCAAAGCCTGCTTCCA  400

seq1  ATGACATACTTTCTCCAGTGAGACCACTTCTCCTAAACTTCCCATATAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATACTTTCTCCAGTGAGACCACTTCTCCTAAACTTCCCATATAGC  450

seq1  AGTACCAACTAGGGATCAAAGACTAGGGAAGACATTTTATTTAAAGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAACTAGGGATCAAAGACTAGGGAAGACATTTTATTTAAAGCATC  500

seq1  ACAAACACCAAAAAAGGAAACCAAATCTTGGCACTAGATATTTTATTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACCAAAAAAGGAAACCAAATCTTGGCACTAGATATTTTATTTGT  550

seq1  TGGCCTGTGGTATCTAGCAGGGCCTTTGTCACCAAACCCCCATAATGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTGTGGTATCTAGCAGGGCCTTTGTCACCAAACCCCCATAATGGAT  600

seq1  TACCTTTATTTAAAGTACATGTGTACCTATGTATTTTATGAAGCTTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTATTTAAAGTACATGTGTACCTATGTATTTTATGAAGCTTCTAT  650

seq1  AGTAATGTTTCCATATAACTCAGACAACTCAGTGTTGTTTTTCCTCCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTTTCCATATAACTCAGACAACTCAGTGTTGTTTTTCCTCCTTA  700

seq1  TCCTTCTTGTACCTTGCCATTTCCTACCCCAATTTAACCTTCCTGCTTCT  750
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCCTTCTTGTACCTTGCCATTTCCTACCCCAATTTAACCTTCCTGC-TCT  749

seq1  CTAATCCCTATTAACTCTTTATGCCACAGCATTCTTTCTCTCCTAACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCCTATTAACTCTTTATGCCACAGCATTCTTTCTCTCCTAACTTG  799

seq1  AAAAGTCCTCATTCCGATGGCGCTGTATTAGTTTCCCGACTCCAGCAGGG  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAAGTCCTCATTCCGATGGCGCTGTATTAG-TTCCCGACTCCAGCAGGG  848

seq1  ATGAAACATGGATGTCTTTTTGTTTTTAATTGGCTATTTTATTTATTTAC  900
      ||||||||||||||||||||||||||  | |||||| |||||||| ||||
seq2  ATGAAACATGGATGTCTTTTTGTTTT--AATGGCTA-TTTATTTA-TTAC  894

seq1  ATTTCAAATGTTATCCCCTATCCCATACCCCCTCCCCCTGCTTCTATGAG  950
      ||||| |||| ||||||||||||||||||||||||||||||||||   ||
seq2  ATTTC-AATG-TATCCCCTATCCCATACCCCCTCCCCCTGCTTCTTGAAG  942

seq1  GGTGCTTCCCACCCACTCACTCATTCCTGTCTACCCAACCTGGCATTCCT  1000
       ||||||||||||||||| ||||||||||||||||||  || ||||||||
seq2  TGTGCTTCCCACCCACTC-CTCATTCCTGTCTACCCA--CTTGCATTCCT  989

seq1  CCACTATAATGGGGCATCGAGCCTTCTTCACATGACCAAGGGCTTC  1046
       |||||||||||||||||||||  || ||| |||||||  ||||||
seq2  -CACTATAATGGGGCATCGAGC--TC-TCAAATGACCA--GGCTTC  1029