BAC Information

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BAC

Clone NameB6Ng01-022O24
Chromosome2 (Build37)1 (Build37)
Map Location 142,776,401 - 142,776,939112,869,793 - 112,870,224
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022O24.bB6Ng01-022O24.g
ACCDH855003DH855004
length839394
definitionDH855003|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O24, 5' end.DH855004|Mus musculus domesticus DNA, BAC clone: B6Ng01-022O24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,401 - 142,776,939)(112,869,793 - 112,870,224)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattaatccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggttgtat
tttgtcttattgactgtgtcttttgccttgcagaagctttgcagtttcat
gaggtcccatttgtcaattctcgatcttatagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacatgataacaaccagttgtgccagcaccatttgttgaaaatg
ctgtctttcttccactggatgtttttagctcccttgttgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagttttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttgttt
tatccttgagaagagtttttgctatcctaggttttttgttatttcagata
aattttgcaaattgctccttctaattcgttgaagaattaagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccgtgagcatgggaga
acagaaattatggcaaacatataggatcaattcagtagaaggccccatca
ctgagagggctaacccataaccaagaagccatttgtaactgaaatctaat
gacaaagtaaaattcaatttttcttgatggaatttcactggcaatatcaa
ctacacttcaggtcaggcctcataccctggattaggtggtgtacacaaaa
ttaattccatagtatttttatttttatttttatggaatttggttacgtta
tttttatctctctgatctggctatttgatttgatttttcttaaaattcat
ttgtttctttgtttgtttgtttgttttagagagttaaagaacattctata
caattaaaaataaactctataataaaatttatttatttattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776401_142776939
seq2: B6Ng01-022O24.b_344_884 (reverse)

seq1  TCTCCCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCT  50
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATGCTCACGGATTGGCAGGATCAACATTGTAAAAATGGCTATCT  50

seq1  TGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACT  100

seq1  CAATTCTTCAACGAATTAGAAGGAGCAATTTGC-AAATTCATCTGGAATA  149
       |||||||||||||||||||||||||||||||| ||||| ||||| ||||
seq2  TAATTCTTCAACGAATTAGAAGGAGCAATTTGCAAAATTTATCTGAAATA  150

seq1  ACAAAAAACCTAGGATAGCAAAAAGTCTTCTCAAGGATAAAAGAACCTCT  199
      |||||||||||||||||||||||| ||||||||||||||||| |||||||
seq2  ACAAAAAACCTAGGATAGCAAAAACTCTTCTCAAGGATAAAACAACCTCT  200

seq1  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAATCACCATGCCTGACCTAAAGCTTTACTACAGAGCAATTGTGAT  250

seq1  -AAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAAT  298
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAAT  300

seq1  AGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTT  350

seq1  CGACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACA  398
      | ||||||||||||||| ||||||| ||||||||||||||||||||||||
seq2  CAACAAGGGAGCTAAAAACATCCAGTGGAAGAAAGACAGCATTTTCAACA  400

seq1  ATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGAT  448
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AATGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGAT  450

seq1  CCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACT  500

seq1  TCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAG  539
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAG  541

seq1: chr1_112869793_112870224
seq2: B6Ng01-022O24.g_69_468

seq1  GAATTCACAGAAATTATGGCAAACATATAGGATCAATTCAGTAGAAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAATTATGGCAAACATATAGGATCAATTCAGTAGAAGGCC  50

seq1  CCATCACTGAGAGGGCTAACCCATAACCAAGAAGCCATTTGTAACTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTGAGAGGGCTAACCCATAACCAAGAAGCCATTTGTAACTGAAA  100

seq1  TCTAATGACAAAGTAAAATTCAATTTTTCTTGATGGAATTTCACTGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATGACAAAGTAAAATTCAATTTTTCTTGATGGAATTTCACTGGCAA  150

seq1  TATCAACTACACTTCAGGTCAGGCCTCATACCCTGGATTAGGTGGTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTACACTTCAGGTCAGGCCTCATACCCTGGATTAGGTGGTGTAC  200

seq1  ACAAAATTAATTCCATAGTATTTTTATTTTTATTTTTATGGAATTTGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTAATTCCATAGTATTTTTATTTTTATTTTTATGGAATTTGGTT  250

seq1  ACGTTATTTTTATCTCTCTGATCTGGCTATTTGATTTGATTTTTCTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTATTTTTATCTCTCTGATCTGGCTATTTGATTTGATTTTTCTTAAA  300

seq1  ATTCATTTGTTTCTTTGTTTGTTTGTTTGTTTTAGAGAGTTAAAGAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGTTTCTTTGTTTGTTTGTTTGTTTTAGAGAGTTAAAGAACAT  350

seq1  TCAAGACAAGTAAAAATAAACTCTAAAATAAAATTTATTTATTTATTTAT  400
      || | |||| ||||||||||||||| |||||||||||||||||||||| |
seq2  TCTATACAATTAAAAATAAACTCTATAATAAAATTTATTTATTTATTTTT  400

seq1  TTATTTATTTATTTATTTATTTATTTATTTTT  432
                                      
seq2  --------------------------------  400