BAC Information

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BAC

Clone NameB6Ng01-023A03
Chromosome1 (Build37)
Map Location 193,493,579 - 193,494,460
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666975, Rps6kc1, Angel2, Vash2, LOC100039445, LOC666987, 9630055N22Rik, 1700022P22Rik, Tatdn3, Nsl1, 9130211I03Rik, 4933417M04Rik, Atf3, Nenf, 2310028N02Rik, Ppp2r5a, LOC100039501, LOC667044, Dtl, Ints7
Downstream geneLpgat1, Nek2, 4930557M11Rik, Slc30a1, 3322402L07Rik, LOC100042611, Traf5, Traf5, LOC100042625, Rcor3, Kcnh1, Hhat
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023A03.bB6Ng01-023A03.g
ACCDH855051DH855052
length810882
definitionDH855051|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A03, 5' end.DH855052|Mus musculus domesticus DNA, BAC clone: B6Ng01-023A03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggctagccagaactacagtgaaactctgggaaatgggggaca
ctgaagatggcttagtggttaacagcacttgttgctcttacagaagactt
ggatatggtttccagtctctcaatccatccataactctagctccaaagag
tccaatgctgtcttctgacccccttgggcatttggcacacaggtggcaca
cttacatacatgtagaccaaacacccatacacataaataagtccttagtt
ctctttttcttttgaaagctctagttgaatacagagaactgtttgccagg
aagtctctttgaaaacaaatctaggaggggtcagcgattaagcacctgct
gctcttcccgggggtcctgagttcaagttccagcatctggtcagacggct
cacagttgcctggaaccctgagcgtgagtgtgtgggatagggtaagtcca
ctccctcttctggtctcaccatacacatagcactcactcacaagacacat
atactatatatacataaataataaacatttttaaatacataatacatata
aaagactttggggtgtaactcaaatgcctgagggcctaggttcaatcccc
aacattaggggaacaaagtcaaactcaaacttaaattgtattgtgaattc
tgagctactggatttactagcaacccaagcctcagttcttttgcatctga
atgcttcacctaagatattaaaaagttgaattctaggccaggtgtggtag
ctcacacccttattcccggcattttgggaggcagaggcaggagaatactt
tgagtcaagg
gaattctgatctggttttaatttacccatgtattgatgtattccaagtct
attttgataatctaatagttggtctttaattttatgcatcagttatttac
tagtgtgtgctcatgagtggtatgggacaggtgatggtgtctctatgcac
aagaagatgtagaaaccccatgcctccacatttgcactcaaaatggaatc
aaaagctactcacgaaatggagtctgccaggacaaggcacagcctgaaag
ctattgtttcatacaacaagaaataacctacagcaaggcctagcctggtc
cacacaaggttcccacctcttgtcatgggtccctctgtctagcactgtgc
tgtttccaggagatggagtgaaacggagagaaaggcaggtaatagagaac
cctacagccagccctgtcgaggctttctgtctcgtaggactgttgaaggt
tgggatcccctgatctgagaagatggctgggggcaagatgcttgtgagag
tgctctctcttccttttttctttttggtttttttttttcaagacagagtt
tctctgtgtagccttggctgtcctagaagtagttctgtagactaggctgg
cctcaagcttacagagatctgcctgcctctgcctcctgaatgctggaatt
aagggcttccactacctgaccccaactatattgtttttgttgttttgttt
agttgagacagggtttgtctgtatagccctggcagtcctggaactcactc
tgtagaccaggctggcctcaaactgcttgcttctgcctcctaagtgctgg
aattaaaggcatgtgtcaccactgcccagcaattatattgttaatgggtt
agtaggtttcggctggggggtaggggggacgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_193493579_193494460
seq2: B6Ng01-023A03.g_64_945

seq1  GAATTCTGATCTGGTTTTAATTTACCCATGTATTGATGTATTCCAAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATCTGGTTTTAATTTACCCATGTATTGATGTATTCCAAGTCT  50

seq1  ATTTTGATAATCTAATAGTTGGTCTTTAATTTTATGCATCAGTTATTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATAATCTAATAGTTGGTCTTTAATTTTATGCATCAGTTATTTAC  100

seq1  TAGTGTGTGCTCATGAGTGGTATGGGACAGGTGATGGTGTCTCTATGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTGTGCTCATGAGTGGTATGGGACAGGTGATGGTGTCTCTATGCAC  150

seq1  AAGAAGATGTAGAAACCCCATGCCTCCACATTTGCACTCAAAATGGAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATGTAGAAACCCCATGCCTCCACATTTGCACTCAAAATGGAATC  200

seq1  AAAAGCTACTCACGAAATGGAGTCTGCCAGGACAAGGCACAGCCTGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTACTCACGAAATGGAGTCTGCCAGGACAAGGCACAGCCTGAAAG  250

seq1  CTATTGTTTCATACAACAAGAAATAACCTACAGCAAGGCCTAGCCTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTTTCATACAACAAGAAATAACCTACAGCAAGGCCTAGCCTGGTC  300

seq1  CACACAAGGTTCCCACCTCTTGTCATGGGTCCCTCTGTCTAGCACTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGTTCCCACCTCTTGTCATGGGTCCCTCTGTCTAGCACTGTGC  350

seq1  TGTTTCCAGGAGATGGAGTGAAACGGAGAGAAAGGCAGGTAATAGAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGGAGATGGAGTGAAACGGAGAGAAAGGCAGGTAATAGAGAAC  400

seq1  CCTACAGCCAGCCCTGTCGAGGCTTTCTGTCTCGTAGGACTGTTGAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGCCAGCCCTGTCGAGGCTTTCTGTCTCGTAGGACTGTTGAAGGT  450

seq1  TGGGATCCCCTGATCTGAGAAGATGGCTGGGGGCAAGATGCTTGTGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCCCCTGATCTGAGAAGATGGCTGGGGGCAAGATGCTTGTGAGAG  500

seq1  TGCTCTCTCTTCCTTTTTTCTTTTTGGTTTTTTTTTTTCAAGACAGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTCTTCCTTTTTTCTTTTTGGTTTTTTTTTTTCAAGACAGAGTT  550

seq1  TCTCTGTGTAGCCTTGGCTGTCCTAGAAGTAGTTCTGTAGACTAGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTGTAGCCTTGGCTGTCCTAGAAGTAGTTCTGTAGACTAGGCTGG  600

seq1  CCTCAAGCTTACAGAGATCTGCCTGCCTCTGCCTCCTGAATGCTGGAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGCTTACAGAGATCTGCCTGCCTCTGCCTCCTGAATGCTGGAATT  650

seq1  AAGGGCTTCCACTACCTGACCCCAACTATATTGTTTTTGTTGTTTTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTCCACTACCTGACCCCAACTATATTGTTTTTGTTGTTTTGTTT  700

seq1  AGTTGAGACAGGGTTTGTCTGTATAGCCCTGGCAGTCCTGGAACTCACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAGACAGGGTTTGTCTGTATAGCCCTGGCAGTCCTGGAACTCACTC  750

seq1  TGTAGACCAGGCTGGCCTCAAACTGCTTGCTTCTGCCTCCTAAGTGCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCCTCAAACTGCTTGCTTCTGCCTCCTAAGTGCTGG  800

seq1  AATTAAAGGCATGTGTCACCACTGCCCAGCAATTATATTGTTAATGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGGCATGTGTCACCACTGCCCAGCAATTATATTGTTAATGGGTT  850

seq1  AGTAGGTTTCGGCTGGGGGGTAGGGGGGACGG  882
      ||||||||||||||||||||||||||||||||
seq2  AGTAGGTTTCGGCTGGGGGGTAGGGGGGACGG  882