BAC Information

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BAC

Clone NameB6Ng01-023B06
Chromosome1 (Build37)
Map Location 148,629,544 - 148,630,714
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023B06.bB6Ng01-023B06.g
ACCDH855102DH855103
length1,0971,167
definitionDH855102|Mus musculus domesticus DNA, BAC clone: B6Ng01-023B06, 5' end.DH855103|Mus musculus domesticus DNA, BAC clone: B6Ng01-023B06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccatgatctgttcaaggactttctaggacgttgtaacac
tggtgaaggcttagctatgtcagaattcaatcttaaaaggcacttataat
aagataatactaaaagagagcacgtggatccatacaccagactaacgcgg
gaatggaatatgagtatatgggttaacaagaacgccagactccaggaggt
gagtttccatgaaactcttggtctcgtgagtggcttccaggcctctcggc
ttgtcaagctgactggaccggagtgcatggcaaacactcaaattgatttc
tgagtggttgacaagtttgcaaccttattagcaatgccagagtgtttccc
ttttacacattcttgccagcatgtgctgaacctttagttactgatcttgg
tcattcttataagtataagatagaatctcagtgtcatttggatttgcata
tccctgttgactaaagattttgaatatttcatgaagagcttcttggccat
tagatattccactgattagaattttctaattctggaccctattgcttaat
tggtttatttagtttcttgacagctcatttctttttattattatttatta
ttgttttcttcataacttatttttttcttttatttactttttttacacta
cagattttattccccgcccccatcctcccaacaaatgttccacatctcat
atcttcttcatacccctctgtctccatgaggaagtccctctccctctaag
ccctcacccaaccagacctgtaaactacttggggcctccagtctcttgag
ggttaggtgcatcttctctgactgaacccagacccagcagtcctgtgctt
tatatgtgttgggggcctcatatcactgaggtatgctgactggttggtgg
tccagtgtttgtgagactctggggtcaggttaactgagattgttggtctc
ctacagggtcacctctccttagcttcctccacttttctctattcactaca
gggtcagcagattcggtcgttggtgggtgcaatatctgcattgatcttta
gctgctggtgggtctttcggagggcagtctgaaagggctcttttttg
gaattccctgatttaggataaacagcttcagtatggatttttgataagaa
accagatgctcatatgcaagtagtagtagctaaagtctaaaggccatgag
atttgtctgttctggtagaaatgaaaagcaaggaacagatggctagcata
aataattcaaaggagctttccaggcacttgagggaaaaacagcatgtcga
actatgtttacaaggttacttgcaacttttgggaagcaaacgtttctatt
tccttcatctagaagtttagacacaaaacctatagtcctttaagtcccga
tgcctacacaataccacacatataatgtaagattcatgtctgtaattcat
cggcaaaattacaaaaatctacatccagggcaaagaacaaactgtggctg
aggataaatgggttttcatttattcctgaaaaggttatggaaacacccac
aaaataattggaatccatttcttcctacatttattgtttgctattatgtc
tctacacagcttatctcagttgttgcagggagaatatgactctgaaatta
gtcccttagtgaaaaaatatataatactagcacaatatatttgctaattc
tcctgagtccttaaattttataacaaagtttttatattattctctcttag
gcaatatgacactgcattttttcatgacaaatatttttaaactaatgctt
ttctctgtttttggttttgagttttcctctatatatacaaattcctttga
ggactgacactgtatcttactgagaaaacttgccttggactaaattctgg
aaatgtagggcaaactattatctctatatagaaagataggtgggtaaaca
ttagtttagatatatacacatgtctgtattccctgactatacatccttat
tatacaagtatccttacccatagctaactgattttcactttgtactttgg
ccccatttttgtaaaaacacacttagtgatttctgagcaatatcatcttc
actgtattttttctcaagacatctcgttcatttcactactcctgatttta
aaataccttctctttcaatttcattctattattctttgtaactaatttgc
agcccacctttatcaataacatgtccaatccctctggtgtcaccaagttc
atcaaatgaatcttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148629544_148630714
seq2: B6Ng01-023B06.g_69_1235 (reverse)

seq1  GCCAAGATTCATTTGATTTGATACTTGTAGACA-CAGAGGATTTTTGACA  49
      ||||||||||||||||  ||| |||||  |||| ||||||   || ||||
seq2  GCCAAGATTCATTTGA--TGA-ACTTGGTGACACCAGAGG-GATTGGACA  46

seq1  TGTTATTGATAAGTGT-GGCTGCAAATTAGTTTACAAAGAATTAATAGAA  98
      ||||||||||||  || ||||||||||||| |||||||||| ||||||||
seq2  TGTTATTGATAAAGGTGGGCTGCAAATTAG-TTACAAAGAA-TAATAGAA  94

seq1  TGAAATTG-AAGAGAA-GTATTTTAAAATACAGGAGTAGTGAAATGAAAC  146
      |||||||| ||||||| |||||||||||| |||||||||||||||| |||
seq2  TGAAATTGAAAGAGAAGGTATTTTAAAAT-CAGGAGTAGTGAAATG-AAC  142

seq1  GAGATGTCTTGAG-AAAAATACAGTGAAGATGATATTGCTCAGAAATCAC  195
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTTGAGAAAAAATACAGTGAAGATGATATTGCTCAGAAATCAC  192

seq1  TAAGTGTGTTTTTACAAAAATGGGGCCCAAAGTACAAAGTGAAAATCAGT  245
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAGTGTGTTTTTACAAAAATGGGG-CCAAAGTACAAAGTGAAAATCAGT  241

seq1  TAGCTATGGGTAAGGATACTTGTATAATAAGGATGTATAGTCAGGGAATA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGGGTAAGGATACTTGTATAATAAGGATGTATAGTCAGGGAATA  291

seq1  CAGACATGTGTATATATCTAAACTAATGTTTACCCACCTATCTTTCTATA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGTGTATATATCTAAACTAATGTTTACCCACCTATCTTTCTATA  341

seq1  TAGGGATAATAGTTTGCCCTACATTTCCAGAATTTAGTCCAAGGCAAGTT  395
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATAATAGTTTGCCCTACATTTCCAGAATTTAGTCCAAGGCAAGTT  391

seq1  TTCTCAGTAAGATACAGTGTCAGTCCTCAAAGGAATTTGTATATATAGAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTAAGATACAGTGTCAGTCCTCAAAGGAATTTGTATATATAGAG  441

seq1  GAAAACTCAAAACCAAAAACAGAGAAAAGCATTAGTTTAAAAATATTTGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTCAAAACCAAAAACAGAGAAAAGCATTAGTTTAAAAATATTTGT  491

seq1  CATGAAAAAATGCAGTGTCATATTGCCTAAGAGAGAATAATATAAAAACT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAAAATGCAGTGTCATATTGCCTAAGAGAGAATAATATAAAAACT  541

seq1  TTGTTATAAAATTTAAGGACTCAGGAGAATTAGCAAATATATTGTGCTAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATAAAATTTAAGGACTCAGGAGAATTAGCAAATATATTGTGCTAG  591

seq1  TATTATATATTTTTTCACTAAGGGACTAATTTCAGAGTCATATTCTCCCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATATTTTTTCACTAAGGGACTAATTTCAGAGTCATATTCTCCCT  641

seq1  GCAACAACTGAGATAAGCTGTGTAGAGACATAATAGCAAACAATAAATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAACTGAGATAAGCTGTGTAGAGACATAATAGCAAACAATAAATGT  691

seq1  AGGAAGAAATGGATTCCAATTATTTTGTGGGTGTTTCCATAACCTTTTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAATGGATTCCAATTATTTTGTGGGTGTTTCCATAACCTTTTCA  741

seq1  GGAATAAATGAAAACCCATTTATCCTCAGCCACAGTTTGTTCTTTGCCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAATGAAAACCCATTTATCCTCAGCCACAGTTTGTTCTTTGCCCT  791

seq1  GGATGTAGATTTTTGTAATTTTGCCGATGAATTACAGACATGAATCTTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTAGATTTTTGTAATTTTGCCGATGAATTACAGACATGAATCTTAC  841

seq1  ATTATATGTGTGGTATTGTGTAGGCATCGGGACTTAAAGGACTATAGGTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATGTGTGGTATTGTGTAGGCATCGGGACTTAAAGGACTATAGGTT  891

seq1  TTGTGTCTAAACTTCTAGATGAAGGAAATAGAAACGTTTGCTTCCCAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTAAACTTCTAGATGAAGGAAATAGAAACGTTTGCTTCCCAAAA  941

seq1  GTTGCAAGTAACCTTGTAAACATAGTTCGACATGCTGTTTTTCCCTCAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAAGTAACCTTGTAAACATAGTTCGACATGCTGTTTTTCCCTCAAG  991

seq1  TGCCTGGAAAGCTCCTTTGAATTATTTATGCTAGCCATCTGTTCCTTGCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGAAAGCTCCTTTGAATTATTTATGCTAGCCATCTGTTCCTTGCT  1041

seq1  TTTCATTTCTACCAGAACAGACAAATCTCATGGCCTTTAGACTTTAGCTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTTCTACCAGAACAGACAAATCTCATGGCCTTTAGACTTTAGCTA  1091

seq1  CTACTACTTGCATATGAGCATCTGGTTTCTTATCAAAAATCCATACTGAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACTTGCATATGAGCATCTGGTTTCTTATCAAAAATCCATACTGAA  1141

seq1  GCTGTTTATCCTAAATCAGGGAATTC  1171
      ||||||||||||||||||||||||||
seq2  GCTGTTTATCCTAAATCAGGGAATTC  1167