BAC Information

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BAC

Clone NameB6Ng01-024E22
Chromosome1 (Build37)
Map Location 71,190,773 - 71,329,287
singlet/doubletdoublet
Overlap geneLOC667900, Abca12
Upstream geneSpag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1
Downstream geneLOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024E22.bB6Ng01-024E22.g
ACCDH855981DH855982
length789456
definitionDH855981|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E22, 5' end.DH855982|Mus musculus domesticus DNA, BAC clone: B6Ng01-024E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,190,773 - 71,191,562)(71,328,831 - 71,329,287)
sequence
gaattcactccacaagtcatttagccaatgacctaataatttctcttttc
tctgtctaataggccagacaactaaatatgttgccctcttcatcctggaa
aattgtgtctttcagatcctatgcttatcattttccttttcttatacaag
ttagtattttccctgccaataaattttttgtagacaatgggaggcttcat
gggacactattataagttgaatatccctgcaacaaatctgcacttttttc
tacaaaggaattcttctcaagtagctgctgagaaaagaacatttatctct
aggtactatatattcccctgagaaactatttgtcattttaacaaatcgtt
tatcaacttgctttctttagtctgaatgaatggaaggaaaacacaagatt
tataattggctctcaagcttcattcatctcaggacccaacgcatcacact
agtacaagcaaacatctggatacaggaaatgtttctactacttcccactt
agctcaccctaccccacctcccagtctagaattttttttccttctctgta
gttctgcagagtggctaatctgaattgttattagctcattacaagcacct
ggggatataaagttgcttgttagaataggttcaaagtctcagctgggtcc
tcacttaccccatatccagaaccttcatctccatgcttattgctgtgccc
tacctcctatgtctttaaagctatactttggcatgccaatctctatctca
gctccttgtaagtacctgggggtggagaggagggaggaa
gaattcaactttaacgcttgtctttaaatgagcaatcccaatacacacaa
gaattcttcaacacacagaatattcattacagaagatcaaattctcattt
tccaaagggaagtggcagtgcaagtgaggtagacctggggaacacctctg
acaggggagggggacagggctctctgttcatcagaaatgcttctctggat
gcgactttctgtgatttcagaggcgagcttcacaggtgacgatttttcct
gcattcaagggctgtgcagggacggacacgtttatttagtctcgagcccc
ctgtcattaggttcatatatgtgggagcaaaatcatccaaaataaagttg
tgttttttagaaatcatccttcgctgggaaaggtgaggtctatcctctat
cttccccatctctgattcactctaggtggagggcagggggtggagatttg
ctgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71190773_71191562
seq2: B6Ng01-024E22.b_37_826

seq1  GGAATTCACTCCACAAGTCATTTAGCCAATGACCTAATAATTTCTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCACTCCACAAGTCATTTAGCCAATGACCTAATAATTTCTCTTTT  50

seq1  CTCTGTCTAATAGGCCAGACAACTAAATATGTTGCCCTCTTCATCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTAATAGGCCAGACAACTAAATATGTTGCCCTCTTCATCCTGGA  100

seq1  AAATTGTGTCTTTCAGATCCTATGCTTATCATTTTCCTTTTCTTATACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGTCTTTCAGATCCTATGCTTATCATTTTCCTTTTCTTATACAA  150

seq1  GTTAGTATTTTCCCTGCCAATAAATTTTTTGTAGACAATGGGAGGCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTATTTTCCCTGCCAATAAATTTTTTGTAGACAATGGGAGGCTTCA  200

seq1  TGGGACACTATTATAAGTTGAATATCCCTGCAACAAATCTGCACTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACACTATTATAAGTTGAATATCCCTGCAACAAATCTGCACTTTTTT  250

seq1  CTACAAAGGAATTCTTCTCAAGTAGCTGCTGAGAAAAGAACATTTATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAAAGGAATTCTTCTCAAGTAGCTGCTGAGAAAAGAACATTTATCTC  300

seq1  TAGGTACTATATATTCCCCTGAGAAACTATTTGTCATTTTAACAAATCAT  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAGGTACTATATATTCCCCTGAGAAACTATTTGTCATTTTAACAAATCGT  350

seq1  TTATCAACTTGCTTTCTTTAGTCTGAATGAATGGAAGGAAAACACAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTTGCTTTCTTTAGTCTGAATGAATGGAAGGAAAACACAAGAT  400

seq1  TTATAAGTGGCTCTCAAGCTTCATTCATCTCAGGACCCAACGCATCACAC  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTGGCTCTCAAGCTTCATTCATCTCAGGACCCAACGCATCACAC  450

seq1  TAGTACAAGCAAACATCTGGATACAGGAAATGTTTCTACTACTTCCCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACAAGCAAACATCTGGATACAGGAAATGTTTCTACTACTTCCCACT  500

seq1  TAGCTCACCCTACCCCACCTCCCAGTCTAGAATTTTTTTTCCTTCTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCACCCTACCCCACCTCCCAGTCTAGAATTTTTTTTCCTTCTCTGT  550

seq1  AGTTCTGCAGAGTGGCTAATCTGAATTGTTATTAGCTCATTACAAGCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGCAGAGTGGCTAATCTGAATTGTTATTAGCTCATTACAAGCACC  600

seq1  TGGGGATATAAAGTTGCTTGTTAGAATAGGTTCAAAGTCTCAGCTGGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATATAAAGTTGCTTGTTAGAATAGGTTCAAAGTCTCAGCTGGGTC  650

seq1  CTCACTTACCCCAAAGCCAGAACCTTCATCTCCATGCTTATTGCTGTGCC  700
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  CTCACTTACCCCATATCCAGAACCTTCATCTCCATGCTTATTGCTGTGCC  700

seq1  CTACCTCCTATGTCTTTAAAGCTATACTTTGGCATGCCAATCTCTATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCTATGTCTTTAAAGCTATACTTTGGCATGCCAATCTCTATCTC  750

seq1  AGGCTCCTTGTAAGTACCTGGGGGTGGAG-GGAGGGAGGAA  790
      | ||||||||||||||||||||||||||| |||||||||||
seq2  A-GCTCCTTGTAAGTACCTGGGGGTGGAGAGGAGGGAGGAA  790

seq1: chr1_71328831_71329287
seq2: B6Ng01-024E22.g_66_521 (reverse)

seq1  CCCCAAACAAATCTCCACCCCCTGCCCTCCACCTAGAGTGAATCAGAGAT  50
       ||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  -CCCCAGCAAATCTCCACCCCCTGCCCTCCACCTAGAGTGAATCAGAGAT  49

seq1  GGGGAAGATAGAGGATAGACCTCACCTTTCCCAGCGAAGGATGATTTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGATAGAGGATAGACCTCACCTTTCCCAGCGAAGGATGATTTCTA  99

seq1  AAAAACACAACTTTATTTTGGATGATTTTGCTCCCACATATATGAACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACAACTTTATTTTGGATGATTTTGCTCCCACATATATGAACCTA  149

seq1  ATGACAGGGGGCTCCTGACTAAATAAACGTGTCCGTCCCTGCACAGCCCT  200
      ||||||||||||||  ||||||||||||||||||||||||||||||||||
seq2  ATGACAGGGGGCTCGAGACTAAATAAACGTGTCCGTCCCTGCACAGCCCT  199

seq1  TGAATGCAGGAAAAATCGTCACCTGTGAAGCTCGCCTCTGAAATCACAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCAGGAAAAATCGTCACCTGTGAAGCTCGCCTCTGAAATCACAGA  249

seq1  AAGTCGCATCCAGAGAAGCATTTCTGATGAACAGAGAGCCCTGTCCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGCATCCAGAGAAGCATTTCTGATGAACAGAGAGCCCTGTCCCCCT  299

seq1  CCCCTGTCAGAGGTGTTCCCCAGGTCTACCTCACTTGCACTGCCACTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTCAGAGGTGTTCCCCAGGTCTACCTCACTTGCACTGCCACTTCC  349

seq1  CTTTGGAAAATGAGAATTTGATCTTCTGTAATGAATATTCTGTGTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAAATGAGAATTTGATCTTCTGTAATGAATATTCTGTGTGTTGA  399

seq1  AGAATTCTTGTGTGTATTGGGATTGCTCATTTAAAGACAAGCGTTAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTTGTGTGTATTGGGATTGCTCATTTAAAGACAAGCGTTAAAGT  449

seq1  TGAATTC  457
      |||||||
seq2  TGAATTC  456