BAC Information

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BAC

Clone NameB6Ng01-024P01
Chromosome1 (Build37)
Map Location 82,759,822 - 82,760,665
singlet/doubletsinglet
Overlap geneTm4sf20
Upstream geneEG665145, Irs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik
Downstream geneLOC100039491, Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524, EG665236, LOC665246, Slc19a3, LOC665196, LOC621495, A030005K14Rik, 5530401N06Rik, EG665272, Ccl20, LOC100039575, 4930563E19Rik, EG621614, 4930544G21Rik, EG622958
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024P01.bB6Ng01-024P01.g
ACCDH856428DH856429
length800847
definitionDH856428|Mus musculus domesticus DNA, BAC clone: B6Ng01-024P01, 5' end.DH856429|Mus musculus domesticus DNA, BAC clone: B6Ng01-024P01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgtactcattttttaatagggttatttggttc
tggagtctaacttcttgagctctttgtatatattgggtattagccctcta
tcagatttaggattggtaaagcttgtttcccattctattggttgactttt
tgtcttattgacagtgtcctttgtcttacagaagcttataaacaaactca
aagaaaaaattcacatagtcatctcattagattctgaaaaagcatttgac
aaaatccaacatttgttcatgataaaagtctctgaaaggtcacgaattta
aagcccgtacctaaaccttttaaaagcaatctacaacaaaccagtagcca
acatcaaactaaatggagagaaacttgaaagaaccccactaaaatcctgg
aatatacagggctgcccactctctacctacctattcaatatagtacttaa
aatcctagacagagcaattagacaacaaaaggagagcatagggatactaa
ttggaaaagaatcagtccaattatcactatttgcagacaaaatgatagca
tattttagtgaccccaaagattccaccagagaacgcctacacctaatata
ccacttcagtgaagtagctggatataaaattaactgaaacaagttctggc
ctttctctactcgaagcctaaacaggctgagaatgaacttttagaagcaa
ccctcttcacaagggcaacatatccttgaaaatatcttgtgtgtgactct
tactcacggagtgaaagatcgggctgattagaactttttagtctctgcag

gaattcccccaacgggcaataaatggaaggtggcgatgattgagttttta
tctgatgagaagagataatactcatctttcctgaaacttccattccaggc
catcccagcaacaacaatgtccttggcagcaagaaaaagagcgtgctgca
acaataagactggggtgagtaccgtgcagcgggcttggaagtggagggac
tgcctcagcagctcctgctgggcctcaggcttgggtgacactgtcggggt
tggttaaacagtcatgtaaagagtgacaagagagcttctcttctctctag
aagtttagctttggagctagcctttgatcctttcctcaacctttggttca
tctaaagtataggaagttttgtttttgttttgtttttgtttttggtttgt
tttttttgagacagggtttttctgtgtagccctggctgtgttggagctca
ctctgtagaccaagctggccttgatcttagagatctgctttcccctgcct
cccaagtgatgggattaaaggcatatgccaccatgcctggcagatcttgt
tattgaccaaaacgctgatggtttaaaacaaaacagaacaaaacaaaact
aaacaaaacaaatcactagagtaggatattgagtatttttcgtaacccaa
cagactcctctgattttccagtccttacacaatgtaagtcaagaacttga
caccgagggtctaattcctctaaggccgggatagaccactgacaagcacc
ctatccttataatacatggggactgaactcagcataaaagttttaatcaa
tgggtttccaattcagatgggaacacacaggttccctcaggagattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_82759822_82760665
seq2: B6Ng01-024P01.g_70_916 (reverse)

seq1  AAATCTCCTGAGATAACCTGTGTGTTCCCATCTGATTGGGAA--CCATTG  48
      ||||||||||||  ||||||||||||||||||||| | ||||  ||||||
seq2  AAATCTCCTGAGGGAACCTGTGTGTTCCCATCTGAATTGGAAACCCATTG  50

seq1  ATTTAAAACCTTTATGCTGAACTCAGT-CCCATGTATTGATGATGGTTGG  97
      | ||||||| ||||||||||  ||||| |||||||||| || | | | ||
seq2  A-TTAAAACTTTTATGCTGAGTTCAGTCCCCATGTATT-ATAAGGATAGG  98

seq1  GTGCTTGTCAGTGGTCTATCCCGGCCTTAGA-GAATTAGACCCTCGGTGT  146
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGCTTGTCAGTGGTCTATCCCGGCCTTAGAGGAATTAGACCCTCGGTGT  148

seq1  CAAGTTCTTGACTTACATTGTGTAAGGACTGGAAAATCAGAGGCGTCTGC  196
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  CAAGTTCTTGACTTACATTGTGTAAGGACTGGAAAATCAGAGGAGTCTGT  198

seq1  TGGGTTTAG-AAAATACTCAATATCCTACTCTAGTGATTTGTTTTGTTTT  245
      ||||||  | ||||||||||||||||||||||||||||||||||||||| 
seq2  TGGGTTACGAAAAATACTCAATATCCTACTCTAGTGATTTGTTTTGTTTA  248

seq1  GTTTTGTTTTGTTTTGTTTTGTTTTAAACCATCAGCGTTTTGGTCAATAA  295
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTCTGTTTTGTTTTAAACCATCAGCGTTTTGGTCAATAA  298

seq1  CAAGATCTGCCAGGCATGGTGGCATATGCCTTTAATCCCATCACTTGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCTGCCAGGCATGGTGGCATATGCCTTTAATCCCATCACTTGGGA  348

seq1  GGCAGGGGAAAGCAGATCTCTAAGATCAAGGCCAGCCTGGTCTACAGAGT  395
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGCAGGGGAAAGCAGATCTCTAAGATCAAGGCCAGCTTGGTCTACAGAGT  398

seq1  GAGCTCCAACACAGCCAGGGCTACACAGAAAAACCCTGTCTCAAAAAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCAACACAGCCAGGGCTACACAGAAAAACCCTGTCTCAAAAAAAA  448

seq1  CAAACCAAAAACAAAAACAAAACAAAAACAAAACTTCCTATACTTTAGAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCAAAAACAAAAACAAAACAAAAACAAAACTTCCTATACTTTAGAT  498

seq1  GAACCAAAGGTTGAGGAAAGGATCAAAGGCTAGCTCCAAAGCTAAACTTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAAGGTTGAGGAAAGGATCAAAGGCTAGCTCCAAAGCTAAACTTC  548

seq1  TAGAGAGAAGAGAAGCTCTCTTGTCACTCTTTACATGACTGTTTAACCAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAAGAGAAGCTCTCTTGTCACTCTTTACATGACTGTTTAACCAA  598

seq1  CCCCGACAGTGTCACCCAAGCCTGAGGCCCAGCAGGAGCTGCTGAGGCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGACAGTGTCACCCAAGCCTGAGGCCCAGCAGGAGCTGCTGAGGCAG  648

seq1  TCCCTCCACTTCCAAGCCCGCTGCACGGTACTCACCCCAGTCTTATTGTT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCACTTCCAAGCCCGCTGCACGGTACTCACCCCAGTCTTATTGTT  698

seq1  GCAGCACGCTCTTTTTCTTGCTGCCAAGGACATTGTTGTTGCTGGGATGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCACGCTCTTTTTCTTGCTGCCAAGGACATTGTTGTTGCTGGGATGG  748

seq1  CCTGGAATGGAAGTTTCAGGAAAGATGAGTATTATCTCTTCTCATCAGAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATGGAAGTTTCAGGAAAGATGAGTATTATCTCTTCTCATCAGAT  798

seq1  AAAAACTCAATCATCGCCACCTTCCATTTATTGCCCGTTGGGGGAATTC  844
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTCAATCATCGCCACCTTCCATTTATTGCCCGTTGGGGGAATTC  847