BAC Information

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BAC

Clone NameB6Ng01-028P14
Chromosome1 (Build37)
Map Location 70,872,586 - 71,040,796
singlet/doubletdoublet
Overlap geneA830006F12Rik, EG667884, EG666083, LOC100042804, LOC100042809
Upstream geneSpag16, LOC100043210
Downstream geneBard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P14.bB6Ng01-028P14.g
ACCDH859305DH859306
length1,1911,116
definitionDH859305|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P14, 5' end.DH859306|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,039,587 - 71,040,796)(70,872,586 - 70,873,450)
sequence
gaattcagcagtccatatagctgtatatcccctgataagactatatatct
atccacgtacgtacataaagatggtcatgagggtctatttcacaaatgtc
aacagaggtgactagaggtcagggagggggaatacatgagaaaggatcat
gacatgaaaacaagtgtataagctaatgggggcagtctcataaacttatt
tctgcacaattgagatataggatatgaaaaagaaaaaagagggggcagat
gtgtgagggagcagggcttctggaggtggctgagtggccatctggaccca
gtgacctgcagaacaagccacccattcatgttccctgtgctggttcacac
atgtgtgccatcactagttgcatagagaagtctatccctctggaattgtt
ttgataacaacagtcgggatgatgacagcactcagatttcatagaaacag
actaggaaatactggaaggtggaaaataatccaatgtgcccttttattaa
agcctcccttcaaattacacgaaatcttttgactacattaagagaaaact
gtcgtcgagttgcatttctccttatagcaataggcagaaggctctgtgct
ttaaacattgttgttttaggatgaatgttaaatgaatcgtgggcaggaag
tcagggaagttgctctgcttatgtgttgcgaataatcttccttcgctgtg
tttacacctgtcagaccagaaaccaacaagacactggagtgtgaagtcac
acctcgtctatattttctcctaataactctgctgtcaccttgaatttgga
tgttggctggcctaagggcctcgcatctcttctgatgaaaggccactggc
aatgtttaggggatgtgtgcctgatagattcctaagtgagaaataggcat
ggagactcaatcgtgttcagatttaaaaataataaaattagccgggtggt
agtggtacacacctttagttccagcacttggaagcagagggtggaggatt
tctgtgagttcaaggctatcctgataaacaaagcaaattttatggcagct
gagtaaaataagttaaataaataaaaccaataaagtatctgttacctcaa
gcaaatattaaccagtatgtcaaactctgtctctcctttttaatgaacac
aattgggatctactcccgagatcattctaaaatatattcta
gaattccacatttaattatgttctgtaccttgaccagtttggactcccca
tgttaatctactgcttcactaatgagcgttgagcaatgcattaatctatg
ggtatagtaatgagttggtctaatactctgtccatatagcagtaggttct
ccccgaccacctataacctatctagccacagagtctcagcactgataatg
gtaccatgtatgtattatggagtgggccttaagtccattcagaaagtagc
tggttattctcatgatgtttgtgccactattacactagtagggtttctgt
tataagccagttgttagaacttgcaggatccacagctgggtaagattggt
gattccttttcccctcaaatactgtacatagcacctctcagtgctacaga
agctcaccagtaaggcacgatgcttctaggtcagtacctacttgatatct
tcatttttatgacttaaatccattgtctctagcaattaggtcttaccatc
agtttctggaaggtaaacaagagcatgacgcagtggctaaaatgttttag
agtctatggtatctcactgtccaaaaactctaaagatgtaacttgttcct
ggtctttggctatttgttaacctattgtgtctagtagggacattgtcagt
ccattataaggtacctacattcatatatatatacatatatatgtgtttgt
atacacatatatacatatatacatgtatatgtatgaacaaatacatatat
atttgtgtgaacataagcacatgtgcattaacctccaataattgagttta
ggttatcaatgatctctatgtgatcaaccacattgatcaaatcttctcat
cattttacttgacatgacaaataaaacctttctttaaattaacttcttca
tttgtatttcaatattcagaccagggtttccttttctacatatggtacac
caattccagatgttctgagagttaaaaaagaactataatggcagtgtgac
aaatggttatgaagaaatttgaagcagggtaggaagatggcaaatatagt
agaaattgtcaggccactagcttccaccacctactgtgaatggtctagga
cctttaagaatcatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71039587_71040796
seq2: B6Ng01-028P14.b_49_1239 (reverse)

seq1  TAGATTATATTTTAGAATGATTTCCTCAGAGAAGTATGATCCCAAATTGT  50
      |||| |||||||||||||||| ||      | |||| |||||| ||||||
seq2  TAGAATATATTTTAGAATGATCTC-----GGGAGTA-GATCCC-AATTGT  43

seq1  TGTCATTAAAAAGAGAAGAACCAGAAGTTTGACATACTGGTT-ATATGTT  99
        |||||||||  || |||  ||| ||||||||||||||||| |||| ||
seq2  GTTCATTAAAA--AGGAGAGACAG-AGTTTGACATACTGGTTAATAT-TT  89

seq1  GCTTTGGGGGTAACAGGATACTTTATTGGTTTTATTTTATTTTACTTTAT  149
      ||||  | ||||||| |||||||||||||||||| ||||||| || ||||
seq2  GCTT--GAGGTAACA-GATACTTTATTGGTTTTA-TTTATTTAAC-TTAT  134

seq1  TTTATTTCAGCTGCCATAGAATTTGCTTTGTATATCAGGATAGCCTTGAA  199
      ||||  |||||||||||| |||||||||||| ||||||||||||||||||
seq2  TTTA-CTCAGCTGCCATAAAATTTGCTTTGTTTATCAGGATAGCCTTGAA  183

seq1  CTCACAGAAATCCTCCACCCTCTGCTTCCCAAGTGCTGGAACTAAAGGTG  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCACAGAAATCCTCCACCCTCTGCTT-CCAAGTGCTGGAACTAAAGGTG  232

seq1  TGTACCACTACCACCCGGCTAATTTTATTATTTTTTAAATCTTGAACACG  299
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TGTACCACTACCACCCGGCTAATTTTATTA-TTTTTAAATC-TGAACACG  280

seq1  ATTGAGTCTCCATGCCTATTTCTCACTTAGGAATCTATCAGGCACACATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTCTCCATGCCTATTTCTCACTTAGGAATCTATCAGGCACACATC  330

seq1  CCCTAAACATTGCCAGTGGCCTTTCATCAGAAGAGATGCGAGGCCCTTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAACATTGCCAGTGGCCTTTCATCAGAAGAGATGCGAGGCCCTTAG  380

seq1  GCCAGCCAACATCCAAATTCAAGGTGACAGCAGAGTTATTAGGAGAAAAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCAACATCCAAATTCAAGGTGACAGCAGAGTTATTAGGAGAAAAT  430

seq1  ATAGACGAGGTGTGACTTCACACTCCAGTGTCTTGTTGGTTTCTGGTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACGAGGTGTGACTTCACACTCCAGTGTCTTGTTGGTTTCTGGTCTG  480

seq1  ACAGGTGTAAACACAGCGAAGGAAGATTATTCGCAACACATAAGCAGAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTGTAAACACAGCGAAGGAAGATTATTCGCAACACATAAGCAGAGC  530

seq1  AACTTCCCTGACTTCCTGCCCACGATTCATTTAACATTCATCCTAAAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCCTGACTTCCTGCCCACGATTCATTTAACATTCATCCTAAAACA  580

seq1  ACAATGTTTAAAGCACAGAGCCTTCTGCCTATTGCTATAAGGAGAAATGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTTTAAAGCACAGAGCCTTCTGCCTATTGCTATAAGGAGAAATGC  630

seq1  AACTCGACGACAGTTTTCTCTTAATGTAGTCAAAAGATTTCGTGTAATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGACGACAGTTTTCTCTTAATGTAGTCAAAAGATTTCGTGTAATTT  680

seq1  GAAGGGAGGCTTTAATAAAAGGGCACATTGGATTATTTTCCACCTTCCAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGCTTTAATAAAAGGGCACATTGGATTATTTTCCACCTTCCAG  730

seq1  TATTTCCTAGTCTGTTTCTATGAAATCTGAGTGCTGTCATCATCCCGACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTAGTCTGTTTCTATGAAATCTGAGTGCTGTCATCATCCCGACT  780

seq1  GTTGTTATCAAAACAATTCCAGAGGGATAGACTTCTCTATGCAACTAGTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTATCAAAACAATTCCAGAGGGATAGACTTCTCTATGCAACTAGTG  830

seq1  ATGGCACACATGTGTGAACCAGCACAGGGAACATGAATGGGTGGCTTGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACACATGTGTGAACCAGCACAGGGAACATGAATGGGTGGCTTGTT  880

seq1  CTGCAGGTCACTGGGTCCAGATGGCCACTCAGCCACCTCCAGAAGCCCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGTCACTGGGTCCAGATGGCCACTCAGCCACCTCCAGAAGCCCTG  930

seq1  CTCCCTCACACATCTGCCCCCTCTTTTTTCTTTTTCATATCCTATATCTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCACACATCTGCCCCCTCTTTTTTCTTTTTCATATCCTATATCTC  980

seq1  AATTGTGCAGAAATAAGTTTATGAGACTGCCCCCATTAGCTTATACACTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGCAGAAATAAGTTTATGAGACTGCCCCCATTAGCTTATACACTT  1030

seq1  GTTTTCATGTCATGATCCTTTCTCATGTATTCCCCCTCCCTGACCTCTAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATGTCATGATCCTTTCTCATGTATTCCCCCTCCCTGACCTCTAG  1080

seq1  TCACCTCTGTTGACATTTGTGAAATAGACCCTCATGACCATCTTTATGTA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTCTGTTGACATTTGTGAAATAGACCCTCATGACCATCTTTATGTA  1130

seq1  CGTACGTGGATAGATATATAGTCTTATCAGGGGATATACAGCTATATGGA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACGTGGATAGATATATAGTCTTATCAGGGGATATACAGCTATATGGA  1180

seq1  CTGCTGAATTC  1210
      |||||||||||
seq2  CTGCTGAATTC  1191

seq1: chr1_70872586_70873450
seq2: B6Ng01-028P14.g_318_1179

seq1  TATTCTCATGATGTTTGTGCCACTATTACACTAGTAGGGTTTCTGTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCATGATGTTTGTGCCACTATTACACTAGTAGGGTTTCTGTTATA  50

seq1  AGCCAGTTGTTAGAACTTGCAGGATCCACAGCTGGGTAAGATTGGTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTTGTTAGAACTTGCAGGATCCACAGCTGGGTAAGATTGGTGATT  100

seq1  CCTTTTCCCCTCAAATACTGTACATAGCACCTCTCAGTGCTACAGAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCCCTCAAATACTGTACATAGCACCTCTCAGTGCTACAGAAGCT  150

seq1  CACCAGTAAGGCACGATGCTTCTAGGTCAGTACCTACTTGATATCTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTAAGGCACGATGCTTCTAGGTCAGTACCTACTTGATATCTTCAT  200

seq1  TTTTATGACTTAAATCCATTGTCTCTAGCAATTAGGTCTTACCATCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGACTTAAATCCATTGTCTCTAGCAATTAGGTCTTACCATCAGTT  250

seq1  TCTGGAAGGTAAACAAGAGCATGACGCAGTGGCTAAAATGTTTTAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGGTAAACAAGAGCATGACGCAGTGGCTAAAATGTTTTAGAGTC  300

seq1  TATGGTATCTCACTGTCCAAAAACTCTAAAGATGTAACTTGTTCCTGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTATCTCACTGTCCAAAAACTCTAAAGATGTAACTTGTTCCTGGTC  350

seq1  TTTGGCTATTTGTTAACCTATTGTGTCTAGTAGGGACATTGTCAGTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTATTTGTTAACCTATTGTGTCTAGTAGGGACATTGTCAGTCCAT  400

seq1  TATAAGGTACCTACATTCATATATATATACATATATATGTGTTTGTATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGTACCTACATTCATATATATATACATATATATGTGTTTGTATAC  450

seq1  ACATATATACATATATACATGTATATGTATGAACAAATACATATATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATACATATATACATGTATATGTATGAACAAATACATATATATTT  500

seq1  GTGTGAACATAAGCACATGTGCATTAACCTCCAATAATTGAGTTTAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAACATAAGCACATGTGCATTAACCTCCAATAATTGAGTTTAGGTT  550

seq1  ATCAATGATCTCTATGTGATCAACCACATTGATCAAATCTTCTCATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGATCTCTATGTGATCAACCACATTGATCAAATCTTCTCATCATT  600

seq1  TTACTTGACATGACAAATAAAACCTTTCCTTTAAATTAACTTCTTCATTT  650
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTACTTGACATGACAAATAAAACCTTT-CTTTAAATTAACTTCTTCATTT  649

seq1  GTATTTCAATATTCAAGACCAGGGTTTCC-TTTCTACATATGGGTACCAC  699
      |||||||||||||| |||||||||||||| ||||||||||| |||| |||
seq2  GTATTTCAATATTC-AGACCAGGGTTTCCTTTTCTACATAT-GGTA-CAC  696

seq1  CAATTCCAGATG-TCTGAGAGTT-ATAAAGAACTAT-ATGGCAGTGTGAC  746
      |||||||||||| |||||||||| | |||||||||| |||||||||||||
seq2  CAATTCCAGATGTTCTGAGAGTTAAAAAAGAACTATAATGGCAGTGTGAC  746

seq1  AAATGGTTATGAAGACA-TTGAAGCCAGGTAAGGAAGATGGCAATATA-A  794
      ||||||||||||||| | |||||| ||||  ||||||||||||| ||| |
seq2  AAATGGTTATGAAGAAATTTGAAG-CAGGGTAGGAAGATGGCAA-ATATA  794

seq1  GTAAGAAATGTACAGGCAACTAGCTTCCAACCACTACTTGTGAATTGTCT  844
      || ||||||   ||||| ||||||||||| |  |||| ||||||| ||||
seq2  GT-AGAAATTGTCAGGCCACTAGCTTCCACCACCTAC-TGTGAATGGTCT  842

seq1  AGGAACTTTTAAGAATCATGA  865
      ||| || ||||||||||||||
seq2  AGG-ACCTTTAAGAATCATGA  862