BAC Information

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BAC

Clone NameB6Ng01-033E13
Chromosome1 (Build37)
Map Location 150,942,129 - 151,012,918
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042792, LOC435647
Downstream geneLOC100042813, Pla2g4a, Ptgs2, LOC676712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033E13.bB6Ng01-033E13.g
ACCDH862382DH862383
length1,141370
definitionDH862382|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E13, 5' end.DH862383|Mus musculus domesticus DNA, BAC clone: B6Ng01-033E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,942,129 - 150,943,287)(151,012,543 - 151,012,918)
sequence
gaattccaaaagataactgtagttacctttaaatattattgattaaaatc
aataatctgacccaaagtgtggcataatatattttgcacattccacagat
gaaatatatttattctagaatgtaatcatcacctaccttaagaaattaca
aggaagaattcataaagcagaaaagcaataaggcagagtgagaaattcat
attaaaaatgaagattaaatacttcctgtcagttgctttgcagatttctc
tttagagcacaataactctgtgtagttcccccaaattgacttgacatcac
taaaattcacttttaccaaccttttatcaccctttataccttttcttctc
ttctattcctaactttgagtcaaacaattctcccataaataacattctta
taaagataggagagaaaagaattagaaagataaagaatattcatattata
ggaaaagcaacttttttttacatttatagttttgaataaacctcaaacaa
tagaagcaattgtatatccatgaatagaatacatgaacataaatatttag
ataaatcactgaactcttctgagcccaggtatatagaagttacaaggtct
ctttttctacgtttttttaactgtatcatgctatttggcttcttagtttc
attagtagcagctcggatagatatggtttggcttagctacctttcaaagc
ccataattcaagtacaacataaatgtgaaaatatgaatgaattggccagt
ccccttatgcttatgttttgggtcttaactagccatgtgaccaaaacaaa
atggttaatattgttcctcagattctgtgatagaattgcccttggtctgt
gccaaagctaaaatccactagaaattatctgagaataaagcatcaagtta
ggtttactcattctgatccagcaatgaagcaatctcaccacacctggtga
atccaaagtgttgaaacacttagagagatttatgtttacagatttcatct
gaagtgtagtggcatgcagcagtcacgttctcctttattgggtatgccaa
aatataaatacatgcaatgttggggaaattctcgtgaaaccaagcagggt
ggagttgccctgggaagcaacatgcttccataaagctggaa
tttatccaatagcagtcagtcctgaaactagtaacatcatacatattgag
caggctatatttattcatttaatatatatataaacaactttaaaaaggag
accataaactttaaagagagcaaggagggatatatggaaaggtttgaatg
ggaaaaatggaaggcaaaattatgtaatgataactgcagaaacagagagt
acaatttaaagaggtttgtttttattttccagtttttctcagatttgagg
agtgggtcctaggatgagaacatttgatattaggtgggataagaatgtat
tgccataataatcaaacaaccacaatgaaaaacagacaggtaagccctgg
aaaatcagggggggggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150942129_150943287
seq2: B6Ng01-033E13.b_46_1186

seq1  GAATTCCAAAAGATAACTGTAGTTACCTTTAAATATTATTGATTAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGATAACTGTAGTTACCTTTAAATATTATTGATTAAAATC  50

seq1  AATAATCTGACCCAAAGTGTGGCATAATATATTTTGCACATTCCACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTGACCCAAAGTGTGGCATAATATATTTTGCACATTCCACAGAT  100

seq1  GAAATATATTTATTCTAGAATGTAATCATCACCTACCTTAAGAAATTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATATTTATTCTAGAATGTAATCATCACCTACCTTAAGAAATTACA  150

seq1  AGGAAGAATTCATAAAGCAGAAAAGCAATAAGGCAGAGTGAGAAATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAATTCATAAAGCAGAAAAGCAATAAGGCAGAGTGAGAAATTCAT  200

seq1  ATTAAAAATGAAGATTAAATACTTCCTGTCAGTTGCTTTGCAGATTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAATGAAGATTAAATACTTCCTGTCAGTTGCTTTGCAGATTTCTC  250

seq1  TTTAGAGCACAATAACTCTGTGTAGTTCCCCCAAATTGACTTGACATCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGCACAATAACTCTGTGTAGTTCCCCCAAATTGACTTGACATCAC  300

seq1  TAAAATTCACTTTTACCAACCTTTTATCACCCTTTATACCTTTTCTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCACTTTTACCAACCTTTTATCACCCTTTATACCTTTTCTTCTC  350

seq1  TTCTATTCCTAACTTTGAGTCAAACAATTCTCCCATAAATAACATTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCCTAACTTTGAGTCAAACAATTCTCCCATAAATAACATTCTTA  400

seq1  TAAAGATAGGAGAGAAAAGAATTAGAAAGATAAAGAATATTCATATTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAGGAGAGAAAAGAATTAGAAAGATAAAGAATATTCATATTATA  450

seq1  GGAAAAGCAACTTTTTTTTACATTTATAGTTTTGAATAAACCTCAAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGCAACTTTTTTTTACATTTATAGTTTTGAATAAACCTCAAACAA  500

seq1  TAGAAGCAATTGTATATCCATGAATAGAATACATGAACATAAATATTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCAATTGTATATCCATGAATAGAATACATGAACATAAATATTTAG  550

seq1  ATAAATCACTGAACTCTTCTGAGCCCAGGTATATAGAAGTTACAAGGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCACTGAACTCTTCTGAGCCCAGGTATATAGAAGTTACAAGGTCT  600

seq1  CTTTTTCTACGTTTTTTTAACTGTATCATGCTATTTGGCTTCTTAGTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTACGTTTTTTTAACTGTATCATGCTATTTGGCTTCTTAGTTTC  650

seq1  ATTAGTAGCAGCTCGGATAGATATGGTTTGGCTTAGCTACCTTTCAAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGCAGCTCGGATAGATATGGTTTGGCTTAGCTACCTTTCAAAGC  700

seq1  CCATAATTCAAGTACAACATAAATGTGAAAATATGAATGAATTGGCCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATTCAAGTACAACATAAATGTGAAAATATGAATGAATTGGCCAGT  750

seq1  CCCCTTATGCTTATGTTTTGGGTCTTAACTAGCCATGTGACCAAAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTATGCTTATGTTTTGGGTCTTAACTAGCCATGTGACCAAAACAAA  800

seq1  ATGGTTAATATTGTTCCTCAGATTCTGTGATAGAATTGCCCTTGGTCTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAATATTGTTCCTCAGATTCTGTGATAGAATTGCCCTTGGTCTGT  850

seq1  GCCAAAGCTAAAATCCACTAGAAATTATCTGAGAATAAAGCATCAAAGTT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCCAAAGCTAAAATCCACTAGAAATTATCTGAGAATAAAGCATC-AAGTT  899

seq1  AGGTTTACTCATTCTGATCCAGCAATGAAGCAATCTCACCACACCTGGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACTCATTCTGATCCAGCAATGAAGCAATCTCACCACACCTGGTG  949

seq1  AAATCCAAAGGTGTTTGAAACACTTAGGAAGAGATTTATGTTTACAAGAT  1000
       |||||||| ||| |||||||||||||  |||||||||||||||| ||||
seq2  -AATCCAAA-GTG-TTGAAACACTTAG--AGAGATTTATGTTTAC-AGAT  993

seq1  TTCATCTGAAGTGTAGTTGGCATGCAGCAGTCACGTTCT-CTGTATTGGG  1049
      |||||||||||||||| |||||||||||||||||||||| || |||||||
seq2  TTCATCTGAAGTGTAG-TGGCATGCAGCAGTCACGTTCTCCTTTATTGGG  1042

seq1  TATTGCCAAAATATAAATACATTGCAATGTTTGGGGGATATTCTCGTGGA  1099
      || |||||||||||||||||| |||||||||  ||||| |||||||||  
seq2  TA-TGCCAAAATATAAATACA-TGCAATGTT--GGGGAAATTCTCGTG--  1086

seq1  AAACAAAGCAGGGGTGTAGTTGCCCCTGGAGAAGCAGCAGTGCTTCCCAT  1149
      |||| ||||| ||||| ||||| |||||| |||||| || ||||| ||||
seq2  AAACCAAGCA-GGGTGGAGTTG-CCCTGG-GAAGCAACA-TGCTT-CCAT  1131

seq1  AAAGCTGGAA  1159
      ||||||||||
seq2  AAAGCTGGAA  1141

seq1: chr1_151012543_151012918
seq2: B6Ng01-033E13.g_70_445 (reverse)

seq1  CACCCCCCCCCCCTGATTTTCCAGGGCTTACCTGTCTGTTTTTCATTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCCCCCTGATTTTCCAGGGCTTACCTGTCTGTTTTTCATTGTG  50

seq1  GTTGTTTGATTATTATGGCAATACATTCTTATCCCACCTAATATCAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTGATTATTATGGCAATACATTCTTATCCCACCTAATATCAAATG  100

seq1  TTCTCATCCTAGGACCCACTCCTCAAATCTGAGAAAAACTGGAAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATCCTAGGACCCACTCCTCAAATCTGAGAAAAACTGGAAAATAAA  150

seq1  AACAAACCTCTTTAAATTGTACTCTCTGTTTCTGCAGTTATCATTACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCTCTTTAAATTGTACTCTCTGTTTCTGCAGTTATCATTACATA  200

seq1  ATTTTGCCTTCCATTTTTCCCATTCAAACCTTTCCATATATCCCTCCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCCTTCCATTTTTCCCATTCAAACCTTTCCATATATCCCTCCTTG  250

seq1  CTCTCTTTAAAGTTTATGGTCTCCTTTTTAAAGTTGTTTATATATATATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTAAAGTTTATGGTCTCCTTTTTAAAGTTGTTTATATATATATT  300

seq1  AAATGAATAAATATAGCCTGCTCAATATGTATGATGTTACTAGTTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAATAAATATAGCCTGCTCAATATGTATGATGTTACTAGTTTCAGG  350

seq1  ACTGACTGCTATTGGATAAAGAATTC  376
      ||||||||||||||||||||||||||
seq2  ACTGACTGCTATTGGATAAAGAATTC  376