BAC Information

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BAC

Clone NameB6Ng01-033I07
Chromosome1 (Build37)
Map Location 81,917,811 - 82,016,761
singlet/doubletdoublet
Overlap genenone
Upstream gene9430031J16Rik, EG621020, LOC433328, EG665145
Downstream geneIrs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik, Tm4sf20, LOC100039491, Hrb, A030005L19Rik, A030014E15Rik, EG621362, A030003K21Rik, LOC665225, LOC100039524, EG665236, LOC665246, Slc19a3, LOC665196
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033I07.bB6Ng01-033I07.g
ACCDH862545DH862546
length967859
definitionDH862545|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I07, 5' end.DH862546|Mus musculus domesticus DNA, BAC clone: B6Ng01-033I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,917,811 - 81,918,656)(82,015,905 - 82,016,761)
sequence
gaattccatttttaaaatgtaggccaaacctatcatggagcttatcccca
tagaatattgattctctttcattcaacaggacaccagttgactgtagctc
ttcttccagtggtagggtcttgagagatttctcctatacacatccacatt
ggcatgccaactggagttttcattgtgcagtcctgtttaggagaccatat
agttacgatttcataggtgcagctccctgttgtatataaaagacactata
tggttcccaatgccctggtcctctgtctcttccaaatttcactatgatcc
ctaatatataaatgtcgaaatctatcaactgcagataggcacattcaact
gttctgtatacttttatgctctacctgcctttgctctggaaagataccag
ccccctcccagcttcccttgaatcctaggatagaagacacagacacacag
tggttcaatttcaacttgccttctgggcagttgctgggtgctaccatctc
ccacctggaaaagcacgcccttatcagtttcttatctccatatttcccac
ctaccctaatcttcagtgactaatcccatctggcctctgacaatcatccc
tgactgcctgtctgtagtagaggccccaggccccagctcctcctgcgacc
tcacatggttgcctggttgtcttctctccaaagcatggtgaactcctttt
ctcttcccttacatctccctttcctccagagacccaggtgttctgccttt
accttccactcacaattagcccatggctttctttactgacagatcaaaaa
ccaactgggggaacagtaccttaacatcagaactgccccctacatccaac
cccagtggttactcctaagtaaataaatacgaacaacactaaatagactc
agcagattgtatttatatatgcatgtgtacaagtacataaatatttagca
acagttaatgaaagagg
gaattcaggatctggcctgcctcctcctcttcctctcaaacaggcctctc
atacatgctgtgcatgtgtagggagcctcatctgttttcagttatgctta
atctatagagaattaacagcacaaatctgttcgcaacaggtgctgtagaa
tagtacgctgttactgggtgacttaatcagtttcctgttttcctaaattt
accaattcattaactcatcatttccccccaccccacacacactcacaaat
accctaatcccaaaccaaagagcaaatccaaataaaggagaaaaagacac
aaggtccctcactcgcacagaaacaaaatcaaatggaagtacttggcagg
aaattctatgtttttctgatcactagttccatcagaccttcctggcagag
tatgtcagatgatgagggtaggggatgttagacaagaagtctctgggtag
ctgaactttcacagatcactctggtgatgtcctttgaacatctcccagtg
ttcactcttgcttttgctcagccaattgagcaggcctctattttaaatag
ctttattattatttttttaatccttggcctcctaagtcttgcagaatatt
ggaaacctgtttagctcataaacatatgtcatgcagaggaagggatagtc
aaagaaatcaggatggcaaagtcaaagatgcaaattaaaacccaggaaga
atcaattaaacaggcaccaaaggtctttttaaatgattaaatgagacaga
agtgcatcttgaggatgaataaattacacgaaagtgtgagaaaagaaacg
aaggcctgggagcttgtgatggggaggcttggttgagtgaacccgtgagg
agagagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81917811_81918656
seq2: B6Ng01-033I07.b_46_890

seq1  GAATTCCATTTTTAAAATGTAGGCCAAACCTATCATGGAGCTTATCCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTTAAAATGTAGGCCAAACCTATCATGGAGCTTATCCCCA  50

seq1  TAGAATATTGATTCTCTTTCATTCAACAGGACACCAGTTGACTGTAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATATTGATTCTCTTTCATTCAACAGGACACCAGTTGACTGTAGCTC  100

seq1  TTCTTCCAGTGGTAGGGTCTTGAGAGATTTCTCCTATACACATCCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAGTGGTAGGGTCTTGAGAGATTTCTCCTATACACATCCACATT  150

seq1  GGCATGCCAACTGGAGTTTTCATTGTGCAGTCCTGTTTAGGAGACCATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGCCAACTGGAGTTTTCATTGTGCAGTCCTGTTTAGGAGACCATAT  200

seq1  AGTTACGATTTCATAGGTGCAGCTCCCTGTTGTATATAAAAGACACTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACGATTTCATAGGTGCAGCTCCCTGTTGTATATAAAAGACACTATA  250

seq1  TGGTTCCCAATGCCCTGGTCCTCTGTCTCTTCCAAATTTCACTATGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCAATGCCCTGGTCCTCTGTCTCTTCCAAATTTCACTATGATCC  300

seq1  CTAATATATAAATGTCGAAATCTATCAACTGCAGATAGGCACATTCAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATATAAATGTCGAAATCTATCAACTGCAGATAGGCACATTCAACT  350

seq1  GTTCTGTATACTTTTATGCTCTACCTGCCTTTGCTCTGGAAAGATACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTATACTTTTATGCTCTACCTGCCTTTGCTCTGGAAAGATACCAG  400

seq1  CCCCCTCCCAGCTTCCCTTGAATCCTAGGATAGAAGACACAGACACACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCAGCTTCCCTTGAATCCTAGGATAGAAGACACAGACACACAG  450

seq1  TGGTTCAATTTCAACTTGCCTTCTGGGCAGTTGCTGGGTGCTACCATCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCAATTTCAACTTGCCTTCTGGGCAGTTGCTGGGTGCTACCATCTC  500

seq1  CCACCTGGAAAAGCACGCCCTTATCAGTTTCTTATCTCCATATTTCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGAAAAGCACGCCCTTATCAGTTTCTTATCTCCATATTTCCCAC  550

seq1  CTACCCTAATCTTCAGTGACTAATCCCATCTGGCCTCTGACAATCATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCTAATCTTCAGTGACTAATCCCATCTGGCCTCTGACAATCATCCC  600

seq1  TGACTGCCTGTCTGTAGTAGAGGCCCCAGGCCCCAGCTCCTCCTGCGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCCTGTCTGTAGTAGAGGCCCCAGGCCCCAGCTCCTCCTGCGACC  650

seq1  TCACATGGTTGCCTGGTTGTCTTCTCTCCAAAGCATGGTGAACTCCTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATGGTTGCCTGGTTGTCTTCTCTCCAAAGCATGGTGAACTCCTTTT  700

seq1  CTCTTCCCTTACATCTCCCTTTCCTCCAGAGACCCAGGTGTTCTGCCTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCTTACATCTCCCTTTCCTCCAGAGACCCAGGTGTTCTGCCTTT  750

seq1  ACCTTCCACTCAACAATTAGCCCATGGCTTTCTTTACTGACAGATCAAAA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCACTC-ACAATTAGCCCATGGCTTTCTTTACTGACAGATCAAAA  799

seq1  ACCAACTGGGGGAACAGTACCTTAACATCAGAACTGCCCCCTACAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTGGGGGAACAGTACCTTAACATCAGAACTGCCCCCTACAT  845

seq1: chr1_82015905_82016761
seq2: B6Ng01-033I07.g_70_928 (reverse)

seq1  TGACTCTCTCCTCACGTGTTCACTC-ACCCAGCCTCCCCATCACATGCCT  49
      |||||||||||||||| |||||||| ||| ||||||||||||||| | ||
seq2  TGACTCTCTCCTCACGGGTTCACTCAACCAAGCCTCCCCATCACAAG-CT  49

seq1  CCCAGGCCTTCGTTTCTTTTCTCACACTTTCGTGTAATTTATTCAT-CTC  98
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCCAGGCCTTCGTTTCTTTTCTCACACTTTCGTGTAATTTATTCATCCTC  99

seq1  AAGATGCACTTCTGTCTCATTTAATCATTTAAAAAGACCTTTGGTGCCTG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCACTTCTGTCTCATTTAATCATTTAAAAAGACCTTTGGTGCCTG  149

seq1  TTTAATTGATTCTTCCTGGGTTTTAATTTGCATCTTTGACTTTGCCATCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGATTCTTCCTGGGTTTTAATTTGCATCTTTGACTTTGCCATCC  199

seq1  TGATTTCTTTGACTATCCCTTCCTCTGCATGACATATGTTTATGAGCT-A  247
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGATTTCTTTGACTATCCCTTCCTCTGCATGACATATGTTTATGAGCTAA  249

seq1  ACAGGTTTCCAATATTCTGCAAGACTTAGGAGGCCAAGGATTAAAAAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTTCCAATATTCTGCAAGACTTAGGAGGCCAAGGATTAAAAAAAT  299

seq1  AATAATAAAGCTATTTAAAATAGAGGCCTGCTCAATTGGCTGAGCAAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAAGCTATTTAAAATAGAGGCCTGCTCAATTGGCTGAGCAAAAG  349

seq1  CAAGAGTGAACACTGGGAGATGTTCAAAGGACATCACCAGAGTGATCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTGAACACTGGGAGATGTTCAAAGGACATCACCAGAGTGATCTGT  399

seq1  GAAAGTTCAGCTACCCAGAGACTTCTTGTCTAACATCCCCTACCCTCATC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTTCAGCTACCCAGAGACTTCTTGTCTAACATCCCCTACCCTCATC  449

seq1  ATCTGACATACTCTGCCAGGAAGGTCTGATGGAACTAGTGATCAGAAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGACATACTCTGCCAGGAAGGTCTGATGGAACTAGTGATCAGAAAAA  499

seq1  CATAGAATTTCCTGCCAAGTACTTCCATTTGATTTTGTTTCTGTGCGAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAATTTCCTGCCAAGTACTTCCATTTGATTTTGTTTCTGTGCGAGT  549

seq1  GAGGGACCTTGTGTCTTTTTCTCCTTTATTTGGATTTGCTCTTTGGTTTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGACCTTGTGTCTTTTTCTCCTTTATTTGGATTTGCTCTTTGGTTTG  599

seq1  GGATTAGGGTATTTGTGAGTGTGTGTGGGGTGGGGGGAAATGATGAGTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTAGGGTATTTGTGAGTGTGTGTGGGGTGGGGGGAAATGATGAGTTA  649

seq1  ATGAATTGGTAAATTTAGGAAAACAGGAAACTGATTAAGTCACCCAGTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGGTAAATTTAGGAAAACAGGAAACTGATTAAGTCACCCAGTAA  699

seq1  CAGCGTACTATTCTACAGCACCTGTTGCGAACAGATTTGTGCTGTTAATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTACTATTCTACAGCACCTGTTGCGAACAGATTTGTGCTGTTAATT  749

seq1  CTCTATAGATTAAGCATAACTGAAAACAGATGAGGCTCCCTACACATGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAGATTAAGCATAACTGAAAACAGATGAGGCTCCCTACACATGCA  799

seq1  CAGCATGTATGAGAGGCCTGTTTGAGAGGAAGAGGAGGAGGCAGGCCAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTATGAGAGGCCTGTTTGAGAGGAAGAGGAGGAGGCAGGCCAGA  849

seq1  TCCTGAATTC  857
      ||||||||||
seq2  TCCTGAATTC  859