BAC Information

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BAC

Clone NameB6Ng01-034E05
Chromosome1 (Build37)
Map Location 75,483,960 - 75,686,097
singlet/doubletdoublet
Overlap geneAW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Upstream geneUsp37, Rqcd1, Plcd4, Zfp142, Bcs1l, Rnf25, Stk36, Ttll4, Cyp27a1, Prkag3, Wnt6, Wnt10a, LOC100042901, Cdk5r2, Fev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034E05.bB6Ng01-034E05.g
ACCDH863066DH863067
length763337
definitionDH863066|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E05, 5' end.DH863067|Mus musculus domesticus DNA, BAC clone: B6Ng01-034E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,685,334 - 75,686,097)(75,483,960 - 75,484,297)
sequence
gaattcctaaggttgaaacaggacaaagaccaacgacaacctagggtaca
gagtaagttcaaggtcagcctgggctacacagagagatctagtcccagaa
agaaagagaaaaatatgttctcaaaacaatcagcgtctaaacaaacctcg
atagcccccacgtactctcaaggaaggaacaagcggcacaaattcacaag
ttgcagtatgttgttcagaccatgacaggggtgtctttaaaaaacaagtg
ccaatacagaattatacgtttctaagttcagaaggctatactcaagtcta
aactaaagttgtcactactgagagagaaaccagcgttggaaagggagaat
ggtaattgccgaagggaaatttccctttgtttgctgtttgtggttttaca
agaagatactcacaactgcttgggtaatttaaaagatcctaagcgccatt
aaccaaatgtttttaaatcatttagggtggggtattctagtatccccagg
ttccacaacatcattggaactgagggcaggtgtcacctgagcctgggcac
gggtctctgtgtgctggctcaatgcttgttcaggaatcaccacatcccct
gagatggaaaaatcaccttcttgcttaatacctcagaaacattactgcac
cttggtggccatttttatcccgtaagcctccatattcatggaccaatgtc
ttaccccgggtttctagtcctgtacactctcatgaccaacaaacaatttg
gggaggaagggtt
cgaatgagggtggaacccgagcaagtcccagggaggttccgaagtgtcgg
cgcgcataattggagagagaacgctaagaggagctaggcagaactcacag
ctggcggcggaaaaggtccgggagacaccatcaggagggtggtggggcgg
ggagctggaggtggaactaagatcactccggcagagtcggcgtaaatgct
gggttgggcaacaacgcgggaagaaggcagaaaagttccttcacctttgt
gtataatactaatggaggatcctggtctccctgtcctggtccgtatcccc
aatatgccccaatctcggtctccgacactgtgcactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75685334_75686097
seq2: B6Ng01-034E05.b_44_806 (reverse)

seq1  AACCCTTTCCTCCCCAACTTGTTTCTTGGTCATGATGTTTGTGCAGGAAT  50
      ||||| ||||||||||| |||||| |||||||||| |  ||| ||||| |
seq2  AACCC-TTCCTCCCCAAATTGTTTGTTGGTCATGA-GAGTGTACAGGACT  48

seq1  AGAAACCCTGACTAAGACACTGGTCCATGACTATGGAGGATTACAGGAT-  99
      |||||||| |  ||||||| |||||||||| |||||||| |||| |||| 
seq2  AGAAACCCGGGGTAAGACATTGGTCCATGAATATGGAGGCTTACGGGATA  98

seq1  AAAATGGCCACCAAGGTGC-CTAATGTTTCTGAGGTACTTAGCAAGAAGG  148
      |||||||||||||||||||  |||||||||||||||| | ||||||||||
seq2  AAAATGGCCACCAAGGTGCAGTAATGTTTCTGAGGTATTAAGCAAGAAGG  148

seq1  TGATTTTTCCATCTCAGGGGATGTTGGTGACTCCTGAACAAGCACTGAGC  198
      ||||||||||||||||||||||| |||||| ||||||||||||| |||||
seq2  TGATTTTTCCATCTCAGGGGATG-TGGTGATTCCTGAACAAGCATTGAGC  197

seq1  CAGCACACAGAGACCCGTGCCCAGGCTCAGGTGACACCTGCCCTCAGTGC  248
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAGCACACAGAGACCCGTGCCCAGGCTCAGGTGACACCTGCCCTCAGTTC  247

seq1  CAATGCTGTTGTGGAACCTGGGGATACTAGAATACCCCACCCTAAATGAT  298
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGTTGTGGAACCTGGGGATACTAGAATACCCCACCCTAAATGAT  297

seq1  TTAAAAACATTTGGCTAATGGCGCTTAGGATCTTTTAAATTACCCAAGCA  348
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTAAAAACATTTGGTTAATGGCGCTTAGGATCTTTTAAATTACCCAAGCA  347

seq1  GTTGTGAGTATCTTCTTGTAAAACCACAAACAGCAAACAAAGGGAAATTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAGTATCTTCTTGTAAAACCACAAACAGCAAACAAAGGGAAATTT  397

seq1  CCCTTCGGCAATTACCATTCTCCCTTTCCAACGCTGGTTTCTCTCTCAGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCGGCAATTACCATTCTCCCTTTCCAACGCTGGTTTCTCTCTCAGT  447

seq1  AGTGACAACTTTAGTTTAGACTTGAGTATAGCCTTCTGAACTTAGAAACG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAACTTTAGTTTAGACTTGAGTATAGCCTTCTGAACTTAGAAACG  497

seq1  TATAATTCTGTATTGGCACTTGTTTTTTAAAGACACCCCTGTCATGGTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCTGTATTGGCACTTGTTTTTTAAAGACACCCCTGTCATGGTCT  547

seq1  GAACAACATACTGCAACTTGTGAATTTGTGCCGCTTGTTCCTTCCTTGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACATACTGCAACTTGTGAATTTGTGCCGCTTGTTCCTTCCTTGAG  597

seq1  AGTACGTGGGGGCTATCGAGGTTTGTTTAGACGCTGATTGTTTTGAGAAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGTGGGGGCTATCGAGGTTTGTTTAGACGCTGATTGTTTTGAGAAC  647

seq1  ATATTTTTCTCTTTCTTTCTGGGACTAGATCTCTCTGTGTAGCCCAGGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCTCTTTCTTTCTGGGACTAGATCTCTCTGTGTAGCCCAGGCT  697

seq1  GACCTTGAACTTACTCTGTACCCTAGGTTGTCGTTGGTCTTTGTCCTGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGAACTTACTCTGTACCCTAGGTTGTCGTTGGTCTTTGTCCTGTT  747

seq1  TCAACCTTCTGAATTC  764
      ||||||||  ||||||
seq2  TCAACCTTAGGAATTC  763

seq1: chr1_75483960_75484297
seq2: B6Ng01-034E05.g_79_414

seq1  GAATGAGGGTGGAACCCGAGCAAGTCCCAGGGAGGTTCCGAAGTGTCGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGGGTGGAACCCGAGCAAGTCCCAGGGAGGTTCCGAAGTGTCGGC  50

seq1  GCGCAGAATTGGAGAGAGAACGCGAAGAGGAGCTAGGCAGAACTCAGAGC  100
      ||||| ||||||||||||||||| |||||||||||||||||||||| |||
seq2  GCGCATAATTGGAGAGAGAACGCTAAGAGGAGCTAGGCAGAACTCACAGC  100

seq1  TGGCGGCGGAGAAAGTCCGGGAGACACCAGCAGTAGGGTGGTGGGGCGGG  150
      |||||||||| || ||||||||||||||| ||| ||||||||||||||||
seq2  TGGCGGCGGAAAAGGTCCGGGAGACACCATCAGGAGGGTGGTGGGGCGGG  150

seq1  GAGCTGGAGGTGGAGCTTATCTGAATAGGGCGGAGTCTGCCTAAATCCTG  200
      |||||||||||||| || |  | | |  ||| ||||| || ||||| |||
seq2  GAGCTGGAGGTGGAACTAAGATCACTCCGGCAGAGTCGGCGTAAATGCTG  200

seq1  GGCAAGGTAAAAAGGGGTCACAGAGGGTAGAAAAGTGGCCACACCTTCCT  250
      ||   || || || | |  | ||| || ||||||||  |  ||||||  |
seq2  GGTTGGGCAACAACGCGGGA-AGAAGGCAGAAAAGTTCCTTCACCTTTGT  249

seq1  GTCGGATGCGGACGCGGCCTCCGGGTCTCAGCGCGCGGCCTCCGAGCTCC  300
      ||   || |  | |  |  ||| ||||||   |  | |  ||||    ||
seq2  GTATAATACTAATGGAGGATCCTGGTCTCCCTGTCCTG-GTCCGTATCCC  298

seq1  CA--GCGCCCGGTGATCTCGGTCTCCGACACAGTGCACTC  338
      ||    ||||    ||||||||||||||||| ||||||||
seq2  CAATATGCCC--CAATCTCGGTCTCCGACACTGTGCACTC  336