BAC Information

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BAC

Clone NameB6Ng01-034O13
Chromosome1 (Build37)
Map Location 4,750,539 - 4,912,907
singlet/doubletdoublet
Overlap geneLOC100039121, LOC620009, Mrpl15, Lypla1, Tcea1, LOC619829, Rgs20
Upstream geneLOC619785, Rp1h, Sox17, LOC664830, LOC664838, LOC664853, LOC619596, EG619980
Downstream geneAtp6v1h, EG636659, Oprk1, Npbwr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034O13.bB6Ng01-034O13.g
ACCDH863523DH863524
length719368
definitionDH863523|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O13, 5' end.DH863524|Mus musculus domesticus DNA, BAC clone: B6Ng01-034O13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,750,539 - 4,751,258)(4,912,534 - 4,912,907)
sequence
gaattctgttgacctttgtcttttggatcattctgacattgttaagagtc
ctcccgtttgcatcatccaaggcccaggtgctcagctacactcacaggag
ccccagacttgtctctttcagcaatgatttctctccctgcagctgcactc
caaggactgcttttgtggaccaccaggaatttcctgtgatagaatatcag
aaagctactggtgtctcggaggaggtgacttcacagggcaaaagttccct
ttctacaataaacattctcggtgtggccatgccggagacttcccacacag
acccccacacctaccagccacttgtcatcttgacaacaaatagccagaga
aagaaacaagatcattggtacaagactgttttttttgttttgttttgttt
tgttttgttttaagtggacctgtttttggtttctggataagttaacctta
tggaaaccaaagcaagcaggagtggtggctcactcctgtaatctcagcgt
tgaggaagctgaagcaagaagtcgctgtgagttcaaggatcaccggacta
tatagcaagagaaaagtgcggagatataagagaagagaaaacaaaccgaa
aagagaagctaccttaaaaataagttttaaaaaagagaaaagaagggtgt
tcttgtgatttttttttttttttgttttttttttttttttttttaaggag
ggtgagatttttgggttgg
aagagatggaggctagccttgggcaacatatcaagtcctcatcttattta
tttattttttattttatgagcattggtgttttgcctgcatgtatgtctga
aggttccagatctctggaattggagctacagacaggtgtgacctgctgtg
tggttgctggcaattaaacccaagtccactggaagagcagctgtgctctg
aaccactgagccaagtctccagcctctcaagtcctcagcttggaaaccaa
ataacttaagactcaagataaattccaagtggtttaaaggccgagaagaa
aatgcaacactttgatactgaaaaggattctctctctctctctctctctc
tctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_4750539_4751258
seq2: B6Ng01-034O13.b_42_760

seq1  GAATTCTGTTGACCTTTGTCTTTTGGATCATTCTGACATTGTTAAGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTGACCTTTGTCTTTTGGATCATTCTGACATTGTTAAGAGTC  50

seq1  CTCCCGTTTGCATCATCCAAGGCCCAGGTGCTCAGCTACACTCACAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGTTTGCATCATCCAAGGCCCAGGTGCTCAGCTACACTCACAGGAG  100

seq1  CCCCAGACTTGTCTCTTTCAGCAATGATTTCTCTCCCTGCAGCTGCACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGACTTGTCTCTTTCAGCAATGATTTCTCTCCCTGCAGCTGCACTC  150

seq1  CAAGGACTGCTTTTGTGGACCACCAGGAATTTCCTGTGATAGAATATCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACTGCTTTTGTGGACCACCAGGAATTTCCTGTGATAGAATATCAG  200

seq1  AAAGCTACTGGTGTCTCGGAGGAGGTGACTTCACAGGGCAAAAGTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTACTGGTGTCTCGGAGGAGGTGACTTCACAGGGCAAAAGTTCCCT  250

seq1  TTCTACAATAAACATTCTCGGTGTGGCCATGCCGGAGACTTCCCACACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAATAAACATTCTCGGTGTGGCCATGCCGGAGACTTCCCACACAG  300

seq1  ACCCCCACACCTACCAGCCACTTGTCATCTTGACAACAAATAGCCAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACACCTACCAGCCACTTGTCATCTTGACAACAAATAGCCAGAGA  350

seq1  AAGAAACAAGATCATTGGTACAAGACTGTTTTTTTTGTTTTGTTTTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAAGATCATTGGTACAAGACTGTTTTTTTTGTTTTGTTTTGTTT  400

seq1  TGTTTTGTTTTAAGTGGACCTGTTTTTGGTTTCTGGATAAGTTAACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTAAGTGGACCTGTTTTTGGTTTCTGGATAAGTTAACCTTA  450

seq1  TGGAAACCAAAGCAAGCAGGAGTGGTGGCTCACTCCTGTAATCTCAGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACCAAAGCAAGCAGGAGTGGTGGCTCACTCCTGTAATCTCAGCGT  500

seq1  TGAGGAAGCTGAAGCAAGAAGTCGCTGTGAGTTCAAGGATCACCGGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAGCTGAAGCAAGAAGTCGCTGTGAGTTCAAGGATCACCGGACTA  550

seq1  TATAGCAAGAGAAAAGTGCGGAGATATAAGAGAAGAGAAAACAAACCGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCAAGAGAAAAGTGCGGAGATATAAGAGAAGAGAAAACAAACCGAA  600

seq1  AAGAGAAGCTACCTTAAAAATAAGTTTT-AAAAAGAGAAAAGAAGGGTTG  649
      |||||||||||||||||||||||||||| |||||||||||||||||| ||
seq2  AAGAGAAGCTACCTTAAAAATAAGTTTTAAAAAAGAGAAAAGAAGGG-TG  649

seq1  TTCTTGTGATTTTTTTTTTTTTTTG-TTTTTTTTTTTTTTTTTTTAGGGA  698
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTCTTGTGATTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTAAGGA  699

seq1  GGGTTGAGCATTTTTGGTTTGG  720
      ||| |||| |||||||| ||||
seq2  GGG-TGAG-ATTTTTGGGTTGG  719

seq1: chr1_4912534_4912907
seq2: B6Ng01-034O13.g_69_442 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCCTTTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCCTTTTCA  50

seq1  GTATCAAAGTGTTGCATTTTCTTCTCGGCCTTTAAACCACTTGGAATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAAAGTGTTGCATTTTCTTCTCGGCCTTTAAACCACTTGGAATTTA  100

seq1  TCTTGAGTCTTAAGTTATTTGGTTTCCAAGCTGAGGACTTGAGAGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGTCTTAAGTTATTTGGTTTCCAAGCTGAGGACTTGAGAGGCTGG  150

seq1  AGACTTGGCTCAGTGGTTCAGAGCACAGCTGCTCTTCCAGTGGACTTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGCTCAGTGGTTCAGAGCACAGCTGCTCTTCCAGTGGACTTGGG  200

seq1  TTTAATTGCCAGCAACCACACAGCAGGTCACACCTGTCTGTAGCTCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGCCAGCAACCACACAGCAGGTCACACCTGTCTGTAGCTCCAAT  250

seq1  TCCAGAGATCTGGAACCTTCAGACATACATGCAGGCAAAACACCAATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGATCTGGAACCTTCAGACATACATGCAGGCAAAACACCAATGCT  300

seq1  CATAAAATAAAAAATAAATAAATAAGATGAGGACTTGATATGTTGCCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAATAAAAAATAAATAAATAAGATGAGGACTTGATATGTTGCCCAA  350

seq1  GGCTAGCCTCCATCTCTTGAATTC  374
      ||||||||||||||||||||||||
seq2  GGCTAGCCTCCATCTCTTGAATTC  374