BAC Information

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BAC

Clone NameB6Ng01-035A12
Chromosome1 (Build37)
Map Location 63,359,783 - 63,493,871
singlet/doubletdoublet
Overlap gene4930431J08Rik, LOC667644, LOC100042638, Adam23
Upstream genePard3b, LOC667592, Nrp2, LOC100043070, A430093A21Rik, Ndufs1, Eef1b2, Gpr1, 1700039I01Rik
Downstream geneGm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035A12.bB6Ng01-035A12.g
ACCDH863611DH863612
length1,03778
definitionDH863611|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A12, 5' end.DH863612|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,359,783 - 63,360,845)(63,493,797 - 63,493,871)
sequence
gaattcaggataaagtatagtttgttgctggatctttatattatttctag
gtttatttattttaatgacttttaaacctggaaatcagtttatttcccag
atttattattcccaaatttagtatatgtacatattgaggtgatcttgagt
acagcacagtgtcccaaactttaactgtatcatgtcccttgatctttgta
tttgggagccttgttggatactataacgatcactgtgaagtgagaacatt
gaggcatagagtagttaacccccttcctacccgtagcaatgggccatctt
ctagtctctatccccttagagtcatcttctctgtttacttcatataagca
gtacctttatgtttctctctctctctctctcctttgtttcatttatcatg
attaggtgttttgttgttggttagttggttttgagagtctcctagttata
gcatgctgagcattttgggttttaaaattactttttagcagttagtttta
aatctacttaattttttttatatatttatgcctctgagagttgaatccag
ggccttgtgcatgtgaatcaagtgctctgctgcaatgtacctccagctct
cagtcttgaatgacaccactaccagaacctttctctcctgccaacagacg
ggaaagccagcagtgcgaggctagctttgttccctgcatggttcttatta
tctgattcctcctcagatccaagactggacagcagagttgccttttagag
tgttcctgtggttcacttgagtgttgtatgctctcgtggcctttgactcc
tctttacctacccatcatgccactcttccctgtgctcagttctcattttc
acatcaacacatcacctcatgctctcatcctttcacggtggagtgcttgc
agtactgagacaagaccacaaatgctgggttaattcagttgtgcacagag
caggaagtgtgttgcagcctctggttagttgctctcctgctaattgatct
actgtcaataggagtcagcttgaattcactatctact
atcggacactgaatgtaaagtgatactttcaaatatatttgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_63359783_63360845
seq2: B6Ng01-035A12.b_45_1081

seq1  GAATTCAGGATAAAGTATAGTTTGTTGCTGGATCTTTATATTATTTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGATAAAGTATAGTTTGTTGCTGGATCTTTATATTATTTCTAG  50

seq1  GTTTATTTATTTTAATGACTTTTAAACCTGGAAATCAGTTTATTTCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTATTTTAATGACTTTTAAACCTGGAAATCAGTTTATTTCCCAG  100

seq1  ATTTATTATTCCCAAATTTAGTATATGTACATATTGAGGTGATCTTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATTCCCAAATTTAGTATATGTACATATTGAGGTGATCTTGAGT  150

seq1  ACAGCACAGTGTCCCAAACTTTAACTGTATCATGTCCCTTGATCTTTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACAGTGTCCCAAACTTTAACTGTATCATGTCCCTTGATCTTTGTA  200

seq1  TTTGGGAGCCTTGTTGGATACTATAACGATCACTGTGAAGTGAGAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGAGCCTTGTTGGATACTATAACGATCACTGTGAAGTGAGAACATT  250

seq1  GAGGCATAGAGTAGTTAACCCCCTTCCTACCCGTAGCAATGGGCCATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCATAGAGTAGTTAACCCCCTTCCTACCCGTAGCAATGGGCCATCTT  300

seq1  CTAGTCTCTATCCCCTTAGAGTCATCTTCTCTGTTTACTTCATATAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTCTATCCCCTTAGAGTCATCTTCTCTGTTTACTTCATATAAGCA  350

seq1  GTACCTTTATGTTTCTCTCTCTCTCTCTCTCCTTTGTTTCATTTATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTTATGTTTCTCTCTCTCTCTCTCTCCTTTGTTTCATTTATCATG  400

seq1  ATTAGGTGTTTTGTTGTTGGTTAGTTGGTTTTGAGAGTCTCCTAGTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTGTTTTGTTGTTGGTTAGTTGGTTTTGAGAGTCTCCTAGTTATA  450

seq1  GCATGCTGAGCATTTTGGGTTTTAAAATTACTTTTTAGCAGTTAGTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCTGAGCATTTTGGGTTTTAAAATTACTTTTTAGCAGTTAGTTTTA  500

seq1  AATCTACTTAATTTTTTTTATATATTTATGCCTCTGAGAGTTGAATCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACTTAATTTTTTTTATATATTTATGCCTCTGAGAGTTGAATCCAG  550

seq1  GGCCTTGTGCATGTGAATCAAGTGCTCTGCTGCAATGTACCTCCAGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGTGCATGTGAATCAAGTGCTCTGCTGCAATGTACCTCCAGCTCT  600

seq1  CAGTCTTGAATGACACCACTACCAGAACCTTTCTCTCCTGCCAACAGACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTGAATGACACCACTACCAGAACCTTTCTCTCCTGCCAACAGACG  650

seq1  GGAAAGCCAGCAGGTGCGAGGCTAGCTTTGTTCCCTGCATGGTTCTTATT  700
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCCAGCA-GTGCGAGGCTAGCTTTGTTCCCTGCATGGTTCTTATT  699

seq1  ATCTGATTCCTCCTCAGATCCAAGACTGGACAGCAGAGTTGCCTTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATTCCTCCTCAGATCCAAGACTGGACAGCAGAGTTGCCTTTTAGA  749

seq1  GTGTTCCTGTGGTTCACTTGAGTGTTGTATGCTCTCGTGGCCTTTGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCCTGTGGTTCACTTGAGTGTTGTATGCTCTCGTGGCCTTTGACTC  799

seq1  CTCTTTACCTACCCATCATGCCACTCTTCCCTGTGCTCAGTTCTCATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTACCTACCCATCATGCCACTCTTCCCTGTGCTCAGTTCTCATTTT  849

seq1  CACCATCAACACATCACCTCATGCTCTCAATCCTTTCACGGTGGAGTGCT  900
      || ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CA-CATCAACACATCACCTCATGCTCTC-ATCCTTTCACGGTGGAGTGCT  897

seq1  TGCAGGTAACTGAGAACAAGAACCAACAAATTGCTGGGTTTTAATCCAGT  950
      |||||   |||||| ||||||  | ||||| |||||||  ||||| ||||
seq2  TGCAG--TACTGAG-ACAAGA--CCACAAA-TGCTGGG--TTAATTCAGT  939

seq1  TGTGCCACAGAGCCAGGAAGTGTGTTGGCAGCCTCTTGGTTAAGTTGCTC  1000
      |||| ||||||| ||||||||||||| |||||||| ||||| ||||||||
seq2  TGTG-CACAGAG-CAGGAAGTGTGTT-GCAGCCTC-TGGTT-AGTTGCTC  984

seq1  TCCTGCATATTTAGATACTTACTGTCAAAATCAGGAAGTCAGCATTGATC  1050
      ||||||  |||  |||   ||||||||| |    | ||||||| ||||  
seq2  TCCTGCTAATT--GAT--CTACTGTCAATA----GGAGTCAGC-TTGAAT  1025

seq1  TCACCTATCTACT  1063
      ||| |||||||||
seq2  TCA-CTATCTACT  1037

seq1: chr1_63493797_63493871
seq2: B6Ng01-035A12.g_79_153 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAAATATATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAAATATATTTGA  50

seq1  AAGTATCACTTTACATTCAGTGTCC  75
      |||||||||||||||||||||||||
seq2  AAGTATCACTTTACATTCAGTGTCC  75