BAC Information

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BAC

Clone NameB6Ng01-038A11
Chromosome1 (Build37)
Map Location 92,640,987 - 92,642,065
singlet/doubletsinglet
Overlap genenone
Upstream geneCentg2, Gbx2, Asb18, Iqca, Cxcr7, Cops8
Downstream geneCol6a3, Mlph, Prlh, Rab17, Lrrfip1, Gm817, LOC665766, Ramp1, Ube2f, LOC665783, Scly, Espnl, Klhl30, BC056923, Ilkap, 1700020N18Rik, Hes6, Per2, Traf3ip1, Asb1
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A11.bB6Ng01-038A11.g
ACCDH865721DH865722
length1,041748
definitionDH865721|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A11, 5' end.DH865722|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattttagtctggcctttgctttgactattctaaagttagagtta
tatcacactataataaaagcccagagaactcaggaagtattgtattgtag
agggagctaggatacttggtattttaaaatacagaagtagaggggcaaat
agtgagagcagccatgtgctagctaatgctaggggtgtctgtttccttcg
ttcttttgatgaccctaaaatctaggtgctgttagccttattttacagac
agggaaactgaggcaggaaaggctaaggaacttaccaagacagctaggct
aggattctcctgtagcaagaagctatcctatattaaagtctggtttttca
gccccggattcaactgcctttttttttttttttttttttttttttttttt
tttttttttttttttttggatcttccaaaggaacattgtcttattctttg
tgtcttccactggaaaattgtcttttttccccaaaagtgaaacaaaaacc
ctccggggtaagggaaactggggggggcctttccccactcctctaaaagc
cttattcccgggtggatctgtgccgctggatgaattcccgcccaagccca
caatggcctctacttcctcttatggagaattttaacctaaaaaaatggct
gaagaaaatgggacatttagcttaaaaccaagccccgcttctcctctgct
aactagctcttggcacctgctccaaagtgcagggcagggtttcccattca
aacagaaaacaataactgggggtgatacaaccccatacaactttgagacc
ctctgcctggaggaggcctcttagggctttgttcccaaaactgtcttcac
ctccacttgctgggcatagccccatttagtggactgaactcctgaccaca
gcaccaaccgctctcttctcagatcattaaatactaaatggctcccggag
ggtatggctccattactaatccgccaaaggaagtgagggagagaattctt
atcaacctcctatttccatctacgccgtggagagatgggtt

gaattctcagctgagggacctcgaatggctgagaagtacctaaagaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatagctaagataaaaaactcaggtgacagc
aggtgctgacagcaagggtatggagaaagaggaacactcctccattgctg
gtgggattgtaagctggtacaactactggaaatcagtctggtggttcctc
agaaaactggacatagtactgaggacccagctataccactcctgggcata
tacccaaagatgctccaatataaaacaaggacacatgctccactatgctc
atagcagccttatttataatatccagaagttggaaacaacctagatgccc
ctcaacagaggaatgggtacagaaaatgtggcacatttacacaatggagt
actactcagctattaaaaacaatgacttcatgaaattcacaggcaaatag
atagaactagaaaatgtcatcttgagtgaagtaacccagtcacaaaagaa
tacacatgacatgtactcactgataagtggatattagccccaaagcttgg
aatactcacagtacaactcatagaccatatgaaactcaagaagaaggaag
accaaagtgtggatgcttcagtcctacttagaagggagaacaaaataatc
acagggatgggtagagaggggagggacctgggatggagagggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_92640987_92642065
seq2: B6Ng01-038A11.b_46_1086

seq1  GAATTCATTTTAGTCTGGCCTTTGCTTTGACTATTCTAAAGTTAGAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAGTCTGGCCTTTGCTTTGACTATTCTAAAGTTAGAGTTA  50

seq1  TATCACACTATAATAAAAGCCCAGAGAACTCAGGAAGTATTGTATTGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACTATAATAAAAGCCCAGAGAACTCAGGAAGTATTGTATTGTAG  100

seq1  AGGGAGCTAGGATACTTGGTATTTTAAAATACAGAAGTAGAGGGGCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGCTAGGATACTTGGTATTTTAAAATACAGAAGTAGAGGGGCAAAT  150

seq1  AGTGAGAGCAGCCATGTGCTAGCTAATGCTAGGGGTGTCTGTTTCCTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGCAGCCATGTGCTAGCTAATGCTAGGGGTGTCTGTTTCCTTCG  200

seq1  TTCTTTTGATGACCCTAAAATCTAGGTGCTGTTAGCCTTATTTTACAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGATGACCCTAAAATCTAGGTGCTGTTAGCCTTATTTTACAGAC  250

seq1  AGGGAAACTGAGGCAGGAAAGGCTAAGGAACTTACCAAGACAGCTAGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAACTGAGGCAGGAAAGGCTAAGGAACTTACCAAGACAGCTAGGCT  300

seq1  AGGATTCTCCTGTAGCAAGAAGCTATCCTATATTAAAGTCTGGTTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTCTCCTGTAGCAAGAAGCTATCCTATATTAAAGTCTGGTTTTTCA  350

seq1  GCCCCGGATTCAACTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGATTCAACTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT  400

seq1  TTTTTTTTTTTTTTTTTGTATCTTCCAATGTAACATTGTCTTATTCTTTG  450
      |||||||||||||||||| ||||||||| | |||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGGATCTTCCAAAGGAACATTGTCTTATTCTTTG  450

seq1  TGTCTTCAACTGTAATATTGTCTTATTTCCCAGATAGTGAAGCAGAAGCA  500
      ||||||| |||| || |||||||| ||||||  | |||||| || || | 
seq2  TGTCTTCCACTGGAAAATTGTCTTTTTTCCCCAAAAGTGAAACAAAAACC  500

seq1  CTCAGGTGTAAGGGAAGCTGTGGTGGCCATTTCCCAACTCCTCTAAAGTC  550
      ||| || ||||||||| ||| || || | |||||| |||||||||||  |
seq2  CTCCGGGGTAAGGGAAACTGGGGGGGGCCTTTCCCCACTCCTCTAAAAGC  550

seq1  CTTATTCCTGTGTGGATCTGTGCTGCTGTATGATTTCCAGCCGATGCCCA  600
      |||||||| | |||||||||||| |||| |||| |||| ||| | |||||
seq2  CTTATTCCCGGGTGGATCTGTGCCGCTGGATGAATTCCCGCCCAAGCCCA  600

seq1  CAATGGCCTCTACTTCCTCTAATGCAGAGTTTAAACTTAGAAAAATGTCT  650
      |||||||||||||||||||| ||| ||| ||| ||| || ||||||| ||
seq2  CAATGGCCTCTACTTCCTCTTATGGAGAATTTTAACCTAAAAAAATGGCT  650

seq1  GAGGATAATGGGACATTCAGCTCAAACCCAAGCCCAGCTTCTCCTCTGCT  700
      || || ||||||||||| |||| ||| |||||||| ||||||||||||||
seq2  GAAGAAAATGGGACATTTAGCTTAAAACCAAGCCCCGCTTCTCCTCTGCT  700

seq1  AGCTAGCTCTTGCCACCTGCTCCAGATGTGCAGGGCAGGGCTTCCCCATC  750
      | |||||||||| ||||||||||| | ||||||||||||| || ||||| 
seq2  AACTAGCTCTTGGCACCTGCTCCA-AAGTGCAGGGCAGGG-TTTCCCATT  748

seq1  CAAGCAGACAACATCAGCTGGGTGTGATACAACCCAATACAGCTTTGAGA  800
      ||| |||| ||||  | ||||| |||||||||||| ||||| ||||||||
seq2  CAAACAGAAAACAATAACTGGGGGTGATACAACCCCATACAACTTTGAGA  798

seq1  CCATCTGCCTGGAGGAGGCCTCTCAGGGCTTTGTCCCAAAGACTGCTTCC  850
      || |||||||||||||||||||| |||||||||| || || ||||  | |
seq2  CCCTCTGCCTGGAGGAGGCCTCTTAGGGCTTTGTTCCCAAAACTGTCTTC  848

seq1  ACCTCCAGCTGCTGGCCATAAGCCCCATTTATGTGACCTGAGCTCCTGAC  900
      |||||||  |||||| ||| ||||||||||| |||  |||| ||||||||
seq2  ACCTCCACTTGCTGGGCAT-AGCCCCATTTA-GTGGACTGAACTCCTGAC  896

seq1  CCACCAGCCACCAACCGGCTCCTCTTCCTCAGACTCATTAAAATCACTAA  950
      |   ||| |||||||| ||| ||||| |||||| ||||||||   |||||
seq2  C--ACAG-CACCAACC-GCT-CTCTT-CTCAGA-TCATTAAA--TACTAA  937

seq1  ATGGCTCCCAGAAGGTTCAGGGGCTCCATTTACTAATTCAGCACAGAGTG  1000
      ||||||||| || |||     ||||||| |||||||| |  || ||   |
seq2  ATGGCTCCCGGAGGGT---ATGGCTCCA-TTACTAATCCGCCAAAG---G  980

seq1  AGGTGAAGGAGAAGAGACATTCTTATCACAACACTACTTTATTTCCACAT  1050
      | |||| ||   ||||| ||||||||  |||| || |  ||||||||   
seq2  AAGTGAGGG---AGAGA-ATTCTTAT--CAAC-CTCC--TATTTCCA---  1018

seq1  TTCATAGCTGCGTGGAGAGAGTATGGGTT  1079
       ||   ||  |||||||||   |||||||
seq2  -TCTACGC--CGTGGAGAG---ATGGGTT  1041


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