BAC Information

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BAC

Clone NameB6Ng01-042D14
Chromosome1 (Build37)
Map Location 47,320,802 - 47,459,520
singlet/doubletdoublet
Overlap geneEG227061
Upstream geneDnahc7b, LOC666855, Slc39a10
Downstream geneLOC666869, LOC546734
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042D14.bB6Ng01-042D14.g
ACCDH868661DH868662
length1,109898
definitionDH868661|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D14, 5' end.DH868662|Mus musculus domesticus DNA, BAC clone: B6Ng01-042D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,458,393 - 47,459,520)(47,320,802 - 47,321,699)
sequence
gaattctttgaaaggattagaacatgtagacttgttagagtagatgtagc
cttgttgaagcaggtatgtcactggagggtgaaccttgatgtttcagaag
atcaaggtagaccctctctttgcctgctgcctgcagatccagatgtaaaa
ctctctggattcttctccatcaccatctcttcctgtgtgcaaccatactt
acctaccatgacaatagtaaacctctgaactgtaagccggaaaattcaat
gcttcccttcataagagttgttgtggtcatggtgtctcttcacagaaata
aaacccaaactaaggcaaatataatatgaaaactatgcagcttattttaa
ggtttcctgaactccagatttattttaaaatctaactactcaataacatg
acaatttttagtaaattttgggaccttcattatactgataagttgacttt
ttactacatatgtgtgtttgtatttgagtacatataggaaagtgatatct
tattaatgtgttgtccacatttgttcttgtacatgtaattctccatatat
tcgtatccaaaggcaaaaaaaaaaaaaaaatcaactcagtgtgtaaagag
aacttgcagtaaattcatttcatccagcctattttgagttttaatattct
ctctaaaggtctttggtccattacttttatgtttgttacctaatttttcc
ctacattttagtgtcccagtgaaggcatatggctataatctttctttaaa
gacccttggagagaagtaataggagatcggagttcagaaggaaggaagga
aggcttctataacataactgtctttggagaatgctttgtttctttactgt
ttcagcacctgccagccatctacccaagaatctaacttccacccaaatat
tcaacagcctttttgtgatagtaacactactgacttatatcctctcgaga
gcagacctgatagcttttgttggctaatgtcttgtttttttgttttgttt
tttttttttgtgatgctggaagctgtctccacccttgcttaaatcctagt
tctctgctacaaaatactacttttctgtattcactacgtgtctatacatg
gaactagct
gaattccatctggttagagtatgatgaaggctttgacagttttctctgaa
gaaggcagatataggaccatatgtaggttaaattgctctaacgaaaagat
ttaaattttattcatgtgtatgtgtgcacccatttatgtggatgaatgac
atgtgtatagacatttccaaggagcccagacaagggtgccaaatcctctg
gacctgcagttatgagttctgggaaccagactctgtaagaacgggaaaca
cttttaactactaagccatctttctagctcctaaatgcccttttaattat
tctcatttgtaggaattcatgatgtcatgattttttttttgagaataaag
aactacagagaattcatactttcctaatattcatttctaaaataacattt
tgttaatttcttgagaatctcttattttcatactcatcccaagctcctct
catatttacacccttcaccctcacctcccagttaacctactatgagttta
ctctcctgtttttgccatagagttcagtttgtgttactcaatttctcttg
aaagtgggcctcccttgaagtgtttttgacctactaggggtcacatcatt
aaagaaagctgactttccctttctgtgcatcaatcaaatgtcaatagctc
ctgatttaaaggtgagatttgtgtccacctcccccactttgtgctgaaat
actgtctgacttgagcttgcacaagtcttgtgtgtgtgctggcttaatca
ctgtgagtttatatggacaatggccttgttatgtccagaaaattctgtat
acttgagtttatcctccacctcgagctctactaatccttctgcctcctca
tctggggagttccccgagcatcgaggaagagatgtttagatagggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_47458393_47459520
seq2: B6Ng01-042D14.b_43_1151 (reverse)

seq1  AGCTAG-TCCATGTATTTAAGACAACGTAGTTGAATACAG-AAAGTAGTT  48
      |||||| |||||||||   |||| |||||| ||||||||| ||||||| |
seq2  AGCTAGTTCCATGTAT---AGAC-ACGTAG-TGAATACAGAAAAGTAG-T  44

seq1  ATTTTTGTTAGCAAGAGAAACTAAGATTTTAAGCAAGGGT-GAGACAGCT  97
      |||||   |||| |||| ||||| || ||||||||||||| |||||||||
seq2  ATTTT--GTAGC-AGAG-AACTAGGA-TTTAAGCAAGGGTGGAGACAGCT  89

seq1  ATCCAAGCATCAACAAAAAAAAAAAAAACAAAAAACAAAAAAAAACAAGA  147
       ||| |||||   || ||||||||||||||||    | ||||||||||||
seq2  -TCC-AGCAT---CACAAAAAAAAAAAACAAA----ACAAAAAAACAAGA  130

seq1  CAATTAGCCAACAAAAAGCTATCAGGTCTGCTCTCGAGAGGATATAAGTC  197
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  C-ATTAGCCAAC-AAAAGCTATCAGGTCTGCTCTCGAGAGGATATAAGTC  178

seq1  AGTAGTGTTACTATCACAAAAAGGCTGTTGAATATTTGGGTGGAAGTTAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGTTACTATCACAAAAAGGCTGTTGAATATTTGGGTGGAAGTTAG  228

seq1  ATTCTTGGGTAGATGGCTGGCAGGTGCTGAAACAGTAAAGAAACAAAGCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGGGTAGATGGCTGGCAGGTGCTGAAACAGTAAAGAAACAAAGCA  278

seq1  TTCTCCAAAGACAGTTATGTTATAGAAGCCTTCCTTCCTTCCTTCTGAAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAAAGACAGTTATGTTATAGAAGCCTTCCTTCCTTCCTTCTGAAC  328

seq1  TCCGATCTCCTATTACTTCTCTCCAAGGGTCTTTAAAGAAAGATTATAGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATCTCCTATTACTTCTCTCCAAGGGTCTTTAAAGAAAGATTATAGC  378

seq1  CATATGCCTTCACTGGGACACTAAAATGTAGGGAAAAATTAGGTAACAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCCTTCACTGGGACACTAAAATGTAGGGAAAAATTAGGTAACAAA  428

seq1  CATAAAAGTAATGGACCAAAGACCTTTAGAGAGAATATTAAAACTCAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGTAATGGACCAAAGACCTTTAGAGAGAATATTAAAACTCAAAA  478

seq1  TAGGCTGGATGAAATGAATTTACTGCAAGTTCTCTTTACACACTGAGTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGGATGAAATGAATTTACTGCAAGTTCTCTTTACACACTGAGTTG  528

seq1  ATTTTTTTTTTTTTTTTGCCTTTGGATACGAATATATGGAGAATTACATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTTTTTTTTTTGCCTTTGGATACGAATATATGGAGAATTACATG  578

seq1  TACAAGAACAAATGTGGACAACACATTAATAAGATATCACTTTCCTATAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAACAAATGTGGACAACACATTAATAAGATATCACTTTCCTATAT  628

seq1  GTACTCAAATACAAACACACATATGTAGTAAAAAGTCAACTTATCAGTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCAAATACAAACACACATATGTAGTAAAAAGTCAACTTATCAGTAT  678

seq1  AATGAAGGTCCCAAAATTTACTAAAAATTGTCATGTTATTGAGTAGTTAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGGTCCCAAAATTTACTAAAAATTGTCATGTTATTGAGTAGTTAG  728

seq1  ATTTTAAAATAAATCTGGAGTTCAGGAAACCTTAAAATAAGCTGCATAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAATAAATCTGGAGTTCAGGAAACCTTAAAATAAGCTGCATAGT  778

seq1  TTTCATATTATATTTGCCTTAGTTTGGGTTTTATTTCTGTGAAGAGACAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATATTATATTTGCCTTAGTTTGGGTTTTATTTCTGTGAAGAGACAC  828

seq1  CATGACCACAACAACTCTTATGAAGGGAAGCATTGAATTTTCCGGCTTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCACAACAACTCTTATGAAGGGAAGCATTGAATTTTCCGGCTTAC  878

seq1  AGTTCAGAGGTTTACTATTGTCATGGTAGGTAAGTATGGTTGCACACAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGAGGTTTACTATTGTCATGGTAGGTAAGTATGGTTGCACACAGG  928

seq1  AAGAGATGGTGATGGAGAAGAATCCAGAGAGTTTTACATCTGGATCTGCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATGGTGATGGAGAAGAATCCAGAGAGTTTTACATCTGGATCTGCA  978

seq1  GGCAGCAGGCAAAGAGAGGGTCTACCTTGATCTTCTGAAACATCAAGGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGGCAAAGAGAGGGTCTACCTTGATCTTCTGAAACATCAAGGTT  1028

seq1  CACCCTCCAGTGACATACCTGCTTCAACAAGGCTACATCTACTCTAACAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTCCAGTGACATACCTGCTTCAACAAGGCTACATCTACTCTAACAA  1078

seq1  GTCTACATGTTCTAATCCTTTCAAAGAATTC  1128
      |||||||||||||||||||||||||||||||
seq2  GTCTACATGTTCTAATCCTTTCAAAGAATTC  1109

seq1: chr1_47320802_47321699
seq2: B6Ng01-042D14.g_67_964

seq1  GAATTCCATCTGGTTAGAGTATGATGAAGGCTTTGACAGTTTTCTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGGTTAGAGTATGATGAAGGCTTTGACAGTTTTCTCTGAA  50

seq1  GAAGGCAGATATAGGACCATATGTAGGTTAAATTGCTCTAACGAAAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAGATATAGGACCATATGTAGGTTAAATTGCTCTAACGAAAAGAT  100

seq1  TTAAATTTTATTCATGTGTATGTGTGCACCCATTTATGTGGATGAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTTATTCATGTGTATGTGTGCACCCATTTATGTGGATGAATGAC  150

seq1  ATGTGTATAGACATTTCCAAGGAGCCCAGACAAGGGTGCCAAATCCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTATAGACATTTCCAAGGAGCCCAGACAAGGGTGCCAAATCCTCTG  200

seq1  GACCTGCAGTTATGAGTTCTGGGAACCAGACTCTGTAAGAACGGGAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCAGTTATGAGTTCTGGGAACCAGACTCTGTAAGAACGGGAAACA  250

seq1  CTTTTAACTACTAAGCCATCTTTCTAGCTCCTAAATGCCCTTTTAATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACTACTAAGCCATCTTTCTAGCTCCTAAATGCCCTTTTAATTAT  300

seq1  TCTCATTTGTAGGAATTCATGATGTCATGATTTTTTTTTTGAGAATAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTTGTAGGAATTCATGATGTCATGATTTTTTTTTTGAGAATAAAG  350

seq1  AACTACAGAGAATTCATACTTTCCTAATATTCATTTCTAAAATAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAGAGAATTCATACTTTCCTAATATTCATTTCTAAAATAACATTT  400

seq1  TGTTAATTTCTTGAGAATCTCTTATTTTCATACTCATCCCAAGCTCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTTCTTGAGAATCTCTTATTTTCATACTCATCCCAAGCTCCTCT  450

seq1  CATATTTACACCCTTCACCCTCACCTCCCAGTTAACCTACTATGAGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTACACCCTTCACCCTCACCTCCCAGTTAACCTACTATGAGTTTA  500

seq1  CTCTCCTGTTTTTGCCATAGAGTTCAGTTTGTGTTACTCAATTTCTCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGTTTTTGCCATAGAGTTCAGTTTGTGTTACTCAATTTCTCTTG  550

seq1  AAAGTGGGCCTCCCTTGAAGTGTTTTTGACCTACTAGGGGTCACATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGGCCTCCCTTGAAGTGTTTTTGACCTACTAGGGGTCACATCATT  600

seq1  AAAGAAAGCTGACTTTCCCTTTCTGTGCATCAATCAAATGTCAATAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCTGACTTTCCCTTTCTGTGCATCAATCAAATGTCAATAGCTC  650

seq1  CTGATTTAAAGGTGAGATTTGTGTCCACCTCCCCCACTTTGTGCTGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAAAGGTGAGATTTGTGTCCACCTCCCCCACTTTGTGCTGAAAT  700

seq1  ACTGTCTGACTTGAGCTTGCACAAGTCTTGTGTGTGTGCTGGCTTAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGACTTGAGCTTGCACAAGTCTTGTGTGTGTGCTGGCTTAATCA  750

seq1  CTGTGAGTTTATATGGACAATGGCCTTGTTATGTCCAGAAAATTCTGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTTATATGGACAATGGCCTTGTTATGTCCAGAAAATTCTGTAT  800

seq1  ACTTGAGTTTATCCTCCACCTCGAGCTCTACTAATCCTTCTGCCTCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTTTATCCTCCACCTCGAGCTCTACTAATCCTTCTGCCTCCTCA  850

seq1  TCTGGGGAGTTCCCCGAGCATCGAGGAAGAGATGCTTAGATAGGGTGT  898
      |||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTGGGGAGTTCCCCGAGCATCGAGGAAGAGATGTTTAGATAGGGTGT  898