BAC Information

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BAC

Clone NameB6Ng01-043G12
Chromosome1 (Build37)
Map Location 131,911,280 - 131,912,375
singlet/doubletsinglet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043G12.bB6Ng01-043G12.g
ACCDH869480DH869481
length1,0911,255
definitionDH869480|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G12, 5' end.DH869481|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctggcatatgtccacacatgcatccatgcatgtgtctctctga
gtgttttctttttcatgcttccaaatatatggctagattttttattatgt
atatgttttttgagattagaatttgattacaaaatttcttccaacgcttt
cgtcccttcaatctctcccataagcaccttcatactcttcttcaaatttt
tggtctttattattattattattattattattattattattattatcatt
attattattattgttgctaattgtttcatgcatacgtgtacatttatata
catatatatttttaaatataacctgttaaatacatataatactacctgca
tgtgtattttcagagctaattacttggcactggacaaacaattggtgttc
ttctccctgagaaatgtctcttctttcatttccagcttttctcagttgca
tatagttatttgtatagatttctctccaaggcaagctccttcaggttatt
gaccattgtaattactgagatatcagtaatttctctctttaaatgacatt
gtttagaaaacatggcaatgtttgatttctacttacaatgtaagtttctg
atttatttcttcataagacaaactcatgtaattggaagggtgctcaagtg
atcattatgttgcaaataaccagtgagtagagacatttacaaatggattt
taatttcttttcatagagtttgacttctcattaatttttttcataaaaat
catcttttattcagacaatgttttgtgtcttcagtatatctggcctcggg
aatttagacattcatccacgggctttctctgggcagttcgagttgtctat
tccattagttcagctggggtcagcaaatcatcagaaatggcagcagagta
tcaaatagttgtttgtagtggcattgctttttctacagtaaaatagtatt
cttcaaagaatagtcataattttcaaatgattacaatcctaaagtagtaa
ataaatgctacaaaacaagctacaggcacgctaatattattcagcctaga
accatcctggaagaaccatttattgcttttttttagcactc
gaattcagtgaaaatgaaggcaaaatattcccaaattcatggggcacaat
gaaagcagtgctaagaggaaagttcacagcactaagtgcttctataaaga
aattagaaagttctcatatcaacaatttaaaaagtacacctggaatctct
agaaaaacaaaagaagcaagcacttcaaaaaggagtggaaggcaggaaat
aaaatcagggctgtttcaatcgattagaaacaaagaaaacagtacaaatc
aacaaagcccagagctggttctttgagaaaatcaacaagatagacgaacc
cttagtcaaactaaccaagagatagaaatacattatccaaatacttaaag
tcagtaatgaaaaagtagacataataacagacactgaggaaattcaaaga
accattaggtcttacttcaaaagcctgcattccacaaaactgaaaaatct
cacaaaatagatgattttctagatagataccacttatcaaagttaagtca
agatcaagtaaactatttaaaccaagatcaagtaaactatataaacagct
gaataacccctaaggaaatagaagtagtcattaaaattctcccaacaaca
acaacaacaaagtctagggccagatggttttagtgtagaattttaccaga
ttttcaaaaaaagagataataacaagactcattaaactatttcataaaat
agaaacagaaggaacactgccacactcattctataatgccacagtcatcc
tgatacctaaaccacacaaagactcaaagaaaaatgagaacttcagacca
atttctcttatgaatgttgatgcaaaaatagtcaataaaatacaacccaa
atccaggaacacaccaaagacatcatgatgaagtaggcttcatcccagat
tcagggatggtctaatgtatgaaaacctgtaaatataatccaccatctaa
acaaactgaaagaaaaaaatgcatgattttttcacactcaataatatcaa
tactcaataaaatactggaaagctgaatacaggaacaccatttaaccaca
tcatgataagtaggcttcattccaaggatgctggcatggttcaatatttt
aaaaacccatcttatgtattccaacatgttatacaaaccgaaagaaaaga
aaaaatcaatgatcatccttattagatgctgaaaaggcccttggacaatc
agcattcctttctgttaaaagttccgagaagaatcaggggatattgggcg
acaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131911280_131912375
seq2: B6Ng01-043G12.b_45_1135

seq1  GAATTCTCTGGCATATGTCCACACATGCATCCATGCATGTGTCTCTCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGCATATGTCCACACATGCATCCATGCATGTGTCTCTCTGA  50

seq1  GTGTTTTCTTTTTCATGCTTCCAAATATATGGCTAGATTTTTTATTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCTTTTTCATGCTTCCAAATATATGGCTAGATTTTTTATTATGT  100

seq1  ATATGTTTTTTGAGATTAGAATTTGATTACAAAATTTCTTCCAACGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTTTTTGAGATTAGAATTTGATTACAAAATTTCTTCCAACGCTTT  150

seq1  CGTCCCTTCAATCTCTCCCATAAGCACCTTCATACTCTTCTTCAAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCCTTCAATCTCTCCCATAAGCACCTTCATACTCTTCTTCAAATTTT  200

seq1  TGGTCTTTATTATTATTATTATTATTATTATTATTATTATTATTATCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTATTATTATTATTATTATTATTATTATTATTATTATTATCATT  250

seq1  ATTATTATTATTGTTGCTAATTGTTTCATGCATACGTGTACATTTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATTATTGTTGCTAATTGTTTCATGCATACGTGTACATTTATATA  300

seq1  CATATATATTTTTAAATATAACCTGTTAAATACATATAATACTACCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATTTTTAAATATAACCTGTTAAATACATATAATACTACCTGCA  350

seq1  TGTGTATTTTCAGAGCTAATTACTTGGCACTGGACAAACAATTGGTGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTTCAGAGCTAATTACTTGGCACTGGACAAACAATTGGTGTTC  400

seq1  TTCTCCCTGAGAAATGTCTCTTCTTTCATTTCCAGCTTTTCTCAGTTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTGAGAAATGTCTCTTCTTTCATTTCCAGCTTTTCTCAGTTGCA  450

seq1  TATAGTTATTTGTATAGATTTCTCTCCAAGGCAAGCTCCTTCAGGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTATTTGTATAGATTTCTCTCCAAGGCAAGCTCCTTCAGGTTATT  500

seq1  GACCATTGTAATTACTGAGATATCAGTAATTTCTCTCTTTAAATGACATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTGTAATTACTGAGATATCAGTAATTTCTCTCTTTAAATGACATT  550

seq1  GTTTAGAAAACATGGCAATGTTTGATTTCTACTTACAATGTAAGTTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAAACATGGCAATGTTTGATTTCTACTTACAATGTAAGTTTCTG  600

seq1  ATTTATTTCTTCATAAGACAAACTCATGTAATTGGAAGGGTGCTCAAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTCTTCATAAGACAAACTCATGTAATTGGAAGGGTGCTCAAGTG  650

seq1  ATCATTATGTTGCAAATAACCAGTGAGTAGAGACATTTACAAATGGATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTATGTTGCAAATAACCAGTGAGTAGAGACATTTACAAATGGATTT  700

seq1  TAATTTCTTTTCATAGAGTTTGACTTCTCATTAATTTTTTTCATAAAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTTTTCATAGAGTTTGACTTCTCATTAATTTTTTTCATAAAAAT  750

seq1  CATCTTTTATTCAGACAATGTTTTGTGTCTTCAGTATATCTGGCCTCGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTATTCAGACAATGTTTTGTGTCTTCAGTATATCTGGCCTCGGG  800

seq1  AATTTAGACATTCATCCACGGGCTTTCTCTGGGCAGTTCGAGTTGTCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGACATTCATCCACGGGCTTTCTCTGGGCAGTTCGAGTTGTCTAT  850

seq1  TCCATTAGTTCAGCTGGGGTCAGCAAATCATCAGAAATGGCAGCAGAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTAGTTCAGCTGGGGTCAGCAAATCATCAGAAATGGCAGCAGAGTA  900

seq1  TCAAATAGTTGTTTGTAGTGGCATTGCTTTTTCTACAGTAAAATAGTTAT  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCAAATAGTTGTTTGTAGTGGCATTGCTTTTTCTACAGTAAAATAG-TAT  949

seq1  TCTTCAAAGAATAGTCATAATTTTCAAATGATTACAATCCTAAAGTAGGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTTCAAAGAATAGTCATAATTTTCAAATGATTACAATCCTAAAGTA-GT  998

seq1  AAATAAATGCTACAAATACAAGCTAACAGGCACGCTAAATATAATACAG-  1049
      |||||||||||||||| ||||||| ||||||||||| ||||| || ||| 
seq2  AAATAAATGCTACAAA-ACAAGCT-ACAGGCACGCT-AATATTATTCAGC  1045

seq1  CTAGACACATCCT-GAAGAACTATTTATTGCTTTTTTTTTTAGCACTC  1096
      |||||  |||||| ||||||| |||||||||  |||||||||||||||
seq2  CTAGAACCATCCTGGAAGAACCATTTATTGC--TTTTTTTTAGCACTC  1091