BAC Information

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BAC

Clone NameB6Ng01-045P10
Chromosome1 (Build37)
Map Location 72,134,764 - 72,317,772
singlet/doubletdoublet
Overlap geneLOC667937, LOC100043255, Mreg, Pecr
Upstream geneBard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319
Downstream geneTmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045P10.bB6Ng01-045P10.g
ACCDH871264DH871265
length1,1301,016
definitionDH871264|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P10, 5' end.DH871265|Mus musculus domesticus DNA, BAC clone: B6Ng01-045P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,134,764 - 72,135,900)(72,316,759 - 72,317,772)
sequence
gaattcctactgggttggtgaagattccacatataacttttttgagatta
tccttattgatccgttccataaagctatcagaagaaatcctgacacccag
tggatcaccaaaccagtccacaaacacagagagatgcatgggctgacatc
tgctggccgaaagagccgtggccttggaaagggccacaagttccaccaca
ctattggtggttcccgccgtgcagcctggagaaggtgcaatactctccag
ctccaccgttaccgttaatacacatggtatttgtaaaattcatatccaat
aaacaatttaggacagtcaaaaaaaaagaattaaacatttatttatttat
ttatttatttatttatttacttatttttcttattgttgtatgtgcataaa
caatgtctgtaagtgtgtgccatggcatgtgcgtggagctgtgaggacag
cttttgaaagtcaactctctttctgccatgggttctggagatcaaacaca
aattatcagacctccctccacaacaagttctgatcctctgcatcaaccat
agaatctttttctcacagttgaagcacctctaatgaaggtggtggaggtg
aaggccctcctccaggttgctgatggccactgtatcactgtgtcctcaca
tatccttcctatgtctgtgaacttgttccccctccccctctctaatcctc
atcatgatagtccctgtctttgactgatctccaccacaaatttatcctaa
atatctcatcttgaagcatcatccctttggcagttaaggctccaatattc
tcttcaggatgtagaagatacaaacataacatataaaacagcatactcaa
tgacaaagacaaatgcactctcctgttgactttgagtgtcatgggtcttt
taatctctaaatagttggacagtttcccaagtgaagacacaaaagaatct
tctttacaagcccttcccagaacagagattgttgctacactctttttctt
agataatgtaagtttgtgtttcattgtctttcctataccatgtctacatg
tttaagcagatgagatgaggtaacttacaaaatcctggcttgaatctctc
tttttaaagtcctcattggttaaatatatt
gaattccattgataatacatgtagccaaatatatgattttcatagcccct
agtattaaaagtatttacagtatcaacatatacttgccgtgtttggggct
ggcgagatggatgagctggtaaaggagcttgccactaagactaaggtcct
gcattccatcccctgagcatcccctgagcccacatgatggaaggagagaa
atggctcacttgatgatctctgccctccatacatgccttgtggtacatgc
ttgagtggacacatatacatacacgtgtgcagagagagagagagagagaa
agagagagagagagagagagagaaccacaacctgttgttctcttttgtaa
taaaaggttcatggggctggtgagatggctcagtgggtaagagcacccga
ctgctcttccgaaggtccagagttcaaatcccagcaaccacatggtggct
cacaaccatccgtaacaagatctgactccctcttctggtgtgtctgaaga
cagctacagtgtacttacataaaataataaataaatcttaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaggttcatcaacatattctcccgggcacatgg
ctttttgagagacacagcttatgcagagtgcattgtatttgataactgtg
gcctggctttgatagagaaggacccagctctctctttaaacagagactca
atgtgacagagactcctaacaaaaaagaatcttgtggagttctcaagtca
ctgaagtgctcatcgacttagttgatgggaaaaatttttgacagaaactg
atgctagtaatgtttgtgtctttacaggcacactgggagcggcaaaagaa
ggtgttacaacctcacaaaatccatggctttggccgtgggccagcagcgg
agtgagatcactggtgtcgctcctgtaagtaactgctatggtgtgaagtc
tactgacaaactgggctcctgattcagattgtgtgggaaaattgggtcac
tggggtgggtgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72134764_72135900
seq2: B6Ng01-045P10.b_44_1173

seq1  GAATTCCTACTGGGTTGGTGAAGATTCCACATATAACTTTTTTGAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTGGGTTGGTGAAGATTCCACATATAACTTTTTTGAGATTA  50

seq1  TCCTTATTGATCCGTTCCATAAAGCTATCAGAAGAAATCCTGACACCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTGATCCGTTCCATAAAGCTATCAGAAGAAATCCTGACACCCAG  100

seq1  TGGATCACCAAACCAGTCCACAAACACAGAGAGATGCATGGGCTGACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCACCAAACCAGTCCACAAACACAGAGAGATGCATGGGCTGACATC  150

seq1  TGCTGGCCGAAAGAGCCGTGGCCTTGGAAAGGGCCACAAGTTCCACCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCCGAAAGAGCCGTGGCCTTGGAAAGGGCCACAAGTTCCACCACA  200

seq1  CTATTGGTGGTTCCCGCCGTGCAGCCTGGAGAAGGTGCAATACTCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGGTGGTTCCCGCCGTGCAGCCTGGAGAAGGTGCAATACTCTCCAG  250

seq1  CTCCACCGTTACCGTTAATACACATGGTATTTGTAAAATTCATATCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCGTTACCGTTAATACACATGGTATTTGTAAAATTCATATCCAAT  300

seq1  AAACAATTTAGGACAGTCAAAAAAAAAGAATTAAACATTTATTTATTTAT  350
      ||||||||||||||||||||||||||||||||||||    ||||||||||
seq2  AAACAATTTAGGACAGTCAAAAAAAAAGAATTAAAC----ATTTATTTAT  346

seq1  TTATTTATTTATTTATTTATTTACTTATTTTTCTTATTGTTGTATGTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTATTTATTTACTTATTTTTCTTATTGTTGTATGTGCA  396

seq1  TAAACAATGTCTGTAAGTGTGTGCCATGGCATGTGCGTGGAGCTGTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATGTCTGTAAGTGTGTGCCATGGCATGTGCGTGGAGCTGTGAGG  446

seq1  ACAGCTTTTGAAAGTCAACTCTCTTTCTGCCATGGGTTCTGGAGATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTGAAAGTCAACTCTCTTTCTGCCATGGGTTCTGGAGATCAAA  496

seq1  CACAAATTATCAGACCTCCCTCCACAACAAGTTCTGATCCTCTGCATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTATCAGACCTCCCTCCACAACAAGTTCTGATCCTCTGCATCAA  546

seq1  CCATAGAATCTTTTTCTCACAGTTGAAGCACCTCTAATGAAGGTGGTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGAATCTTTTTCTCACAGTTGAAGCACCTCTAATGAAGGTGGTGGA  596

seq1  GGTGAAGGCCCTCCTCCAGGTTGCTGATGGCCACTGTATCACTGTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCCCTCCTCCAGGTTGCTGATGGCCACTGTATCACTGTGTCCT  646

seq1  CACATATCCTTCCTATGTCTGTGAACTTGTTCCCCCTCCCCCTCTCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATCCTTCCTATGTCTGTGAACTTGTTCCCCCTCCCCCTCTCTAAT  696

seq1  CCTCATCATGATAGTCCCTGTCTTTGACTGATCTCCACCACAAATTTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCATGATAGTCCCTGTCTTTGACTGATCTCCACCACAAATTTATC  746

seq1  CTAAATATCTCATCTTGAAGCATCATCCCTTTGGCAGTTAAGGCTCCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATCTCATCTTGAAGCATCATCCCTTTGGCAGTTAAGGCTCCAAT  796

seq1  ATTCTCTTCAGGAGGTAGAAGATACAAACATAACATATAAAACAGCATAC  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTTCAGGATGTAGAAGATACAAACATAACATATAAAACAGCATAC  846

seq1  TCAATGACAAAGACAAATGCACTCTCCTGTTGAC-TTGAGTGTCATGGGT  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAATGACAAAGACAAATGCACTCTCCTGTTGACTTTGAGTGTCATGGGT  896

seq1  C-TTTAATCTCTAAATAGTTGGACAGTTTCCCAAGTGAAGACACAAAAGA  948
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATCTCTAAATAGTTGGACAGTTTCCCAAGTGAAGACACAAAAGA  946

seq1  ATCTCCTTTACAAAGCCCTTCCCAGAACAGAGATTGTTGCTACAACTCTT  998
      |||| |||||| ||||||||||||||||||||||||||||||| ||||||
seq2  ATCTTCTTTAC-AAGCCCTTCCCAGAACAGAGATTGTTGCTAC-ACTCTT  994

seq1  TTTCTTAGATAATGTAAGTTTGTGGTTTCATTGTCTTTCCTATACCATGT  1048
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTCTTAGATAATGTAAGTTTGT-GTTTCATTGTCTTTCCTATACCATGT  1043

seq1  CTACATGTTTAAGCAGAATGAAGATGA-GTAACATACAAATTCCTGCCTG  1097
      |||||||||||||||| ||| |||||| ||||| |||||| ||||| || 
seq2  CTACATGTTTAAGCAG-ATG-AGATGAGGTAACTTACAAAATCCTGGCTT  1091

seq1  AATTCTCTCTTTTTAAAGTCCTCATTTGGTTTAAATTATT  1137
       | ||||||||||||||||||||| |||||| ||  ||||
seq2  GAATCTCTCTTTTTAAAGTCCTCA-TTGGTTAAATATATT  1130

seq1: chr1_72316759_72317772
seq2: B6Ng01-045P10.g_68_1082 (reverse)

seq1  CAGACACACACACCAGTGACACAATTATCCACAACACAATCTGAATCAGG  50
      ||||||| ||| |||||||| ||||| ||  | |||||||||||||||||
seq2  CAGACACCCACCCCAGTGACCCAATTTTC--CCACACAATCTGAATCAGG  48

seq1  AGCCCAGTTTGTCAGTAGACTTCACA-CATAGCAGTTACTTACAGGAGCG  99
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCCCAGTTTGTCAGTAGACTTCACACCATAGCAGTTACTTACAGGAGCG  98

seq1  ACACAGTTGATCCTCACTCCGCTGCTGGCCCAC-GCCAAAGCCATGGATT  148
      ||||   |||| ||||||||||||||||||||| ||||||||||||||||
seq2  ACACCAGTGAT-CTCACTCCGCTGCTGGCCCACGGCCAAAGCCATGGATT  147

seq1  TTGTGAGGTTGTAAACACCTTCTCTTGCCGCT-CCAGTGTGCCTGTAAAG  197
      |||||||||||| |||||||||| |||||||| |||||||||||||||||
seq2  TTGTGAGGTTGT-AACACCTTCTTTTGCCGCTCCCAGTGTGCCTGTAAAG  196

seq1  ACACAAACATTACTAGCATCAGTTTCTGTCAAACATTTTTCCCATCAACT  247
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACACAAACATTACTAGCATCAGTTTCTGTCAAAAATTTTTCCCATCAACT  246

seq1  AAGTCGATGAGCACTTCAGTGACTTGAGAACTCCACAAGATTC-TTTTTG  296
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGTCGATGAGCACTTCAGTGACTTGAGAACTCCACAAGATTCTTTTTTG  296

seq1  TTAGGAGTCTCTGTCACATTGAGTCTCTGTTTAAAGAGAGAGCTGGGTCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGTCTCTGTCACATTGAGTCTCTGTTTAAAGAGAGAGCTGGGTCC  346

seq1  TTCTCTATCAAAGCCAGGCCACAGTTATCAAATACAATGCACTCTGCATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATCAAAGCCAGGCCACAGTTATCAAATACAATGCACTCTGCATA  396

seq1  AGCTGTGTCTCTC-AAAAGCCATGTGCCCGGGAGAATATGTTGATGAACC  445
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTCTCTCAAAAAGCCATGTGCCCGGGAGAATATGTTGATGAACC  446

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATTTATTTATTATTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATTTATTTATTATTTTA  496

seq1  TGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGAGTCAGAT  546

seq1  CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTC  596

seq1  TGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCAC  646

seq1  CAGCCCCATGAACCTTTTATTACAAAAGAGAACAACAGGTTGTGGTTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCATGAACCTTTTATTACAAAAGAGAACAACAGGTTGTGGTTCTC  696

seq1  TCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGCACACGTGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGCACACGTGTA  746

seq1  TGTATATGTGTCCACTCAAGCATGTACCACAAGGCATGTATGGAGGGCAG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATGTGTCCACTCAAGCATGTACCACAAGGCATGTATGGAGGGCAG  796

seq1  AGATCATCAAGTGAGCCATTTCTCTCCTTCCATCATGTGGGCTCAGGGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATCAAGTGAGCCATTTCTCTCCTTCCATCATGTGGGCTCAGGGGA  846

seq1  TGCTCAGGGGATGGAATGCAGGACCTTAGTCTTAGTGGCAAGCTCCTTTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGGGATGGAATGCAGGACCTTAGTCTTAGTGGCAAGCTCCTTTA  896

seq1  CCAGCTCATCCATCTCGCCAGCCCCAAACACGGCAAGTATATGTTGATAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCATCCATCTCGCCAGCCCCAAACACGGCAAGTATATGTTGATAC  946

seq1  TGTAAATACTTTTAATACTAGGGGCTATGAAAATCATATATTTGGCTACA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATACTTTTAATACTAGGGGCTATGAAAATCATATATTTGGCTACA  996

seq1  TGTATTATCAATGGAATTC  1014
      |||||||||||||||||||
seq2  TGTATTATCAATGGAATTC  1015