BAC Information

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BAC

Clone NameB6Ng01-047F13
Chromosome1 (Build37)
Map Location 115,970,034 - 115,970,992
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047F13.bB6Ng01-047F13.g
ACCDH872235DH872236
length1,125949
definitionDH872235|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F13, 5' end.DH872236|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactctcgcacctgcgtacaaggcttgtttactagttaggcacag
cggaggcccgcgccatcttataatggcgattgctcgctgcacacacggct
ctcctcagagattactggcggcacacatgcgattgcttgcagcacgtacc
ggctctccacatctccccctttttattttattaaaatttaaggctggtct
aggcctgtgtaattatgcccatccgctgtggctcctgtcttaggtcgttc
ctccaatgtcacagcctttcctgtcatagggtaaccctatcgccaccggg
ccccgtgtcttaggttgatctgtgcatgaggaaagttgcccgtccctgga
taccgcagtgctatgtgacattaactactaaatgacctagggcgaactct
ataaaagaggccagccaccaatgtcaattaaatttttagcatagatagcc
agatttcaggggaggccccttgctcgatggcagcaagtgcttgagttatc
acaaccttgtcacgtgtttgttgggttctgagcttgcaaaccaaccagag
catgaccacaagtccacagcaggtggcaacgccaaataaacctaccccca
cccattccttaaaataagaaaaggcagatgaaatccaggaggagaggccc
tctgtcaatgacaggtccactcgtgtcgagttgatctttagaacggccgc
tctcaggcctcaagggtctcatcgaatctttcagaccagtttcctgcaag
atataaagaaagctgtctagacagattagctgcataagtaaaattttcat
atggacactgtaatgcacagagcttcagtttctttcacacccactggcat
ctgtatagacactatctgtctcgcagtcagcgctgatcaatcatcagcct
ccttacttgtactagcagagttgaacgtgatgcatcagccgatctgctga
gctgatattgtgctgatgacatctaacctacgtactgcactgtagcgcgc
tgctgctgatgcatgatcatgcacatatgcaatcctttgcgactgtagga
ggttcctgacggatcatgatctgcatgcagagtctgtatcatggatccag
actggaatcgtcgagtatcatggta
gaattctcttagaggcttttataaacctgcactgagttgaaatcctttaa
gtaagcaggaaagacaatgatgtatatgtcttttcaccctcagttgtttt
atttttttaaatgacagcacatttatccagctacctctctcatgtgaagt
tttgtaaatgacctgcttcatgcattttacaaaaaagaaataaaatgcaa
tttctgatatatcagggaaatattttcctgaaatgggatgactgaaaaga
aggtcctaatgataaggattctaataacctcctagagactagaaagaaaa
ctgaataaaaaaaaattctatctctaagttaaaatgtgcacggttaaaat
tgaatgcttagaagttgtgcatggcagaaatacaagtcttttgtgtttgt
tcatatattgttacttatcatcagtaataagcaaaaagctgtaattcctc
ttcatttttctgtatagattagaactgtgcctacctgtctgtgatgggaa
ccaaagttttaatgtgaagtaacagataatagtaggttttctaggcatgt
gttccctgaacatttgcatcatgtaaagcatctgtagaaaatagaaaccc
aagttcatgtagttgttgtgattatgaggggaaaatgtgcataaaaccac
tagttcaaggattttgcacaatagcttcctttgagtttaagccttttccc
caggtagatgtgggggctcataaggctgaggaagctaaagttggaggatt
ctctagagctccacctttgaatctccatccccgctctgcctctttgacac
ccaccacccaggttacagtagaagtggacttttctagggatgaaactgac
cagctgttctgcgaggaaaaatctcagacctggggagctgttcctggtct
gcagacagctctagcatgcacttatctgagtctcagatgtaggtgcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115970034_115970992
seq2: B6Ng01-047F13.g_66_1014

seq1  GAATTCTCTTAGAGGCTTTTATAAACCTGCACTGAGTTGAAATCCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAGAGGCTTTTATAAACCTGCACTGAGTTGAAATCCTTTAA  50

seq1  GTAAGCAGGAAAGACAATGATGTATATGTCTTTTCACCCTCAGTTGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGGAAAGACAATGATGTATATGTCTTTTCACCCTCAGTTGTTTT  100

seq1  ATTTTTTTAAATGACAGCACATTTATCCAGCTACCTCTCTCATGTGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAAATGACAGCACATTTATCCAGCTACCTCTCTCATGTGAAGT  150

seq1  TTTGTAAATGACCTGCTTCATGCATTTTACAAAAAAGAAATAAAATGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAATGACCTGCTTCATGCATTTTACAAAAAAGAAATAAAATGCAA  200

seq1  TTTCTGATATATCAGGGAAATATTTTCCTGAAATGGGATGACTGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATATATCAGGGAAATATTTTCCTGAAATGGGATGACTGAAAAGA  250

seq1  AGGTCCTAATGATAAGGATTCTAATAACCTCCTAGAGACTAGAAAGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCTAATGATAAGGATTCTAATAACCTCCTAGAGACTAGAAAGAAAA  300

seq1  CTGAATAAAAAAAAATTCTATCTCTAAGTTAAAATGTGCACGGTTAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAAAAAAAATTCTATCTCTAAGTTAAAATGTGCACGGTTAAAAT  350

seq1  TGAATGCTTAGAAGTTGTGCATGGCAGAAATACAAGTCTTTTGTGTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCTTAGAAGTTGTGCATGGCAGAAATACAAGTCTTTTGTGTTTGT  400

seq1  TCATATATTGTTACTTATCATCAGTAATAAGCAAAAAGCTGTAATTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATTGTTACTTATCATCAGTAATAAGCAAAAAGCTGTAATTCCTC  450

seq1  TTCATTTTTCTGTATAGATTAGAACTGTGCCTACCTGTCTGTGATGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTTCTGTATAGATTAGAACTGTGCCTACCTGTCTGTGATGGGAA  500

seq1  CCAAAGTTTTAATGTGAAGTAACAGATAATAGTAGGTTTTCTAGGCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTTTAATGTGAAGTAACAGATAATAGTAGGTTTTCTAGGCATGT  550

seq1  GTTCCCTGAACATTTGCATCATGTAAAGCATCTGTAGAAAATAGAAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTGAACATTTGCATCATGTAAAGCATCTGTAGAAAATAGAAACCC  600

seq1  AAGTTCATGTAGTTGTTGTGATTATGAGGGGAAAATGTGCATAAAACCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATGTAGTTGTTGTGATTATGAGGGGAAAATGTGCATAAAACCAC  650

seq1  TAGTTCAAGGATTTTGCACAATAGCTTCCTTTGAGTTTAAGCCTTTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCAAGGATTTTGCACAATAGCTTCCTTTGAGTTTAAGCCTTTTCCC  700

seq1  CAGGTAGATGTGGGGGCTCATAAGGCTGAGGAAGCTAAAAGTTGGAGGAT  750
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAGGTAGATGTGGGGGCTCATAAGGCTGAGGAAGCT-AAAGTTGGAGGAT  749

seq1  TCTCTAGAGCTCCACCTTTGAATCTCCATCCCCGCTCTGCCTCTTTGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGAGCTCCACCTTTGAATCTCCATCCCCGCTCTGCCTCTTTGACA  799

seq1  CCCACCACCCAGGTTACAGTAGAAGTGGACCTTTCTAGGGATGAAACTGA  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCCACCACCCAGGTTACAGTAGAAGTGGACTTTTCTAGGGATGAAACTGA  849

seq1  CCAGCTGTTCTGCGAGGAAAAAAATCTCAGACCTGGGGAGCTGGTCCCTG  900
      |||||||||||||||||  ||||||||||||||||||||||| || ||||
seq2  CCAGCTGTTCTGCGAGG--AAAAATCTCAGACCTGGGGAGCT-GTTCCTG  896

seq1  GTCCTGCAGACAGCTCTAGCATTGCACTTATCTGAGTCTTCAGGATGTTA  950
      || |||||||||||||||||| |||||||||||||||| ||| |||||  
seq2  GT-CTGCAGACAGCTCTAGCA-TGCACTTATCTGAGTC-TCA-GATGT--  940

seq1  AGGTGCACT  959
      |||||||||
seq2  AGGTGCACT  949