BAC Information

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BAC

Clone NameB6Ng01-049C21
Chromosome1 (Build37)
Map Location 10,907,931 - 10,908,865
singlet/doubletsinglet
Overlap genenone
Upstream gene6030422M02Rik, LOC100039596, 4930418G15Rik, Cops5, Cspp1, Arfgef1, Cpa6, LOC433271
Downstream geneC030045D06Rik, A830018L16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049C21.bB6Ng01-049C21.g
ACCDH873517DH873518
length9861,121
definitionDH873517|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C21, 5' end.DH873518|Mus musculus domesticus DNA, BAC clone: B6Ng01-049C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacctccttggcagagttctcctgtatttctttaagtgagttat
taatacccttcttaaaatcctctatgagcatcatgagatatgattttaaa
tctgaatcttgattttcaggtgtgtagatgtatctaggactcactgtggt
gggagcactgggttctgatgatgccaagtggtcttggtttctattagcaa
gattcttacgtttgccttttgccatctggtaatctgtggtggtagatgtt
ctagctgtctctggctggagcttgttcctcctgtgattctttagcctctg
tcaggcactcctgggattccaactctctcctgagtctcagtggtcagagc
actctctgcaggcaagctctcctcttgcagggaaggtgcacagaagtctg
gagctcagatccacctcctgagtcctcgggtcaaggccctccctgccagc
caattctcctctggcagggaaggtgtccaggagtctgggtctcagctctg
cctcctggctgaggatgaaggtccaaagggaccctgtccaagaagctctg
ttgcttcttctgcccatgtgctctcctgtgtagcctggtgtcagtgatcc
caagatcctgggtgtgctagggcctgtagtgattgtgtccaatatggtgc
ggggctggcactgactggaacaaaccccagctgctggttgggtgggtttt
ctttgtccctgttcatgctggcacaagaccttctgggatttttttaaaca
tatgtttgcattccactcaacagtgatccccagatcctgggtgtgctagg
gtccgctgagtttgcacccaagatgagtattttattctttagaggaagac
ttgggttaaaagcaagatgccatgataaagcagatctaatcaagggctac
cacaagcattctcagagagactgcagtgagagacttattttctagtcatt
attattgacatctgagactaggaagtgacaatataa
gaattctttgtttagctctgtgccccattttttaatggggttatttgaat
ttctggagtccagcttcttgagctctttgtatatattggatattagtccc
aattgttaaagatcctttcccaatctgttggtggcctttttgtcttattg
acagtgtcttttgccttaaagaagctttgcaattttatgaggtcccattt
gtcaattcttgatcttcacgcaagccattgctgttctgtttaggaatttt
ccccctgtgcccatatcttcgaggcttttccctactttttcctctattaa
tttcagtgtctctggtcttatgtggaggtttttgatccacttagacttga
gctttgtacaaggagataagaatggatcaatttgcattcttctacatgat
aaccaccagttataaatgctgtcttttttccactggatggttttagctcc
cttgtcaaagattaagtgcccatagctgtgtgaattcatttctgggtctt
caattctattccattgatctacctgtaccagtaccatgcagtttttatca
caattgctctgtagtacagcttaatgtcaggcatggtgattcccccagag
gttcttttattgttgagaatagtttttgctatcctaggtttttttatttt
tccagaagaatttgcaaattgccctttctatctcactgaagaattgagtt
ggaattttgatggtgattgcattgaatctatagattgctttctgcaggat
agccatttttactatattaatcctgctgatccatgatcatgggagatctt
tccatcttctgagatcttcttcaatttctttcttcagagacttgaagttc
ttatcatacagatctttcacttcttagttagagtcgcaccaagtatttta
tattatttgtgactattgtgacggtgctacttttatatgtacttgacctt
ttcccttattactttaatatctatctgtattaagtgcattgtggtctgat
gttagtggcaggaggaattctttctggtcagtctatttgagttctgtaag
cttctggtataggcatctctctcaggtagggagactttctccgagttgga
gaagagattgtgacgctctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_10907931_10908865
seq2: B6Ng01-049C21.b_105_1030

seq1  CTTAAAATCCTCTATGAGCATCATGAGATATGATTTTAAATCTGAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATCCTCTATGAGCATCATGAGATATGATTTTAAATCTGAATCTT  50

seq1  GATTTTCAGGTGTGTAGATGTATCTAGGACTCACTGTGGTGGGAGCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAGGTGTGTAGATGTATCTAGGACTCACTGTGGTGGGAGCACTG  100

seq1  GGTTCTGATGATGCCAAGTGGTCTTGGTTTCTATTAGCAAGATTCTTACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGATGATGCCAAGTGGTCTTGGTTTCTATTAGCAAGATTCTTACG  150

seq1  TTTGCCTTTTGCCATCTGGTAATCTGTGGTGGTAGATGTTCTAGCTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTTTGCCATCTGGTAATCTGTGGTGGTAGATGTTCTAGCTGTCT  200

seq1  CTGGCTGGAGCTTGTTCCTCCTGTGATTCTTTAGCCTCTGTCAGGCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGGAGCTTGTTCCTCCTGTGATTCTTTAGCCTCTGTCAGGCACTC  250

seq1  CTGGGATTCCAACTCTCTCCTGAGTCTCAGTGGTCAGAGCACTCTCTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTCCAACTCTCTCCTGAGTCTCAGTGGTCAGAGCACTCTCTGCA  300

seq1  GGCAAGCTCTCCTCTTGCAGGGAAGGTGCACAGAAGTCTGGAGCTCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTCTCCTCTTGCAGGGAAGGTGCACAGAAGTCTGGAGCTCAGAT  350

seq1  CCACCTCCTGAGTCCTCGGGTCAAGGCCCTCCCTGCCAGCCAATTCTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCCTGAGTCCTCGGGTCAAGGCCCTCCCTGCCAGCCAATTCTCCT  400

seq1  CTGGCAGGGAAGGTGTCCAGGAGTCTGGGTCTCAGCTCTGCCTCCTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAGGGAAGGTGTCCAGGAGTCTGGGTCTCAGCTCTGCCTCCTGGCT  450

seq1  GAGGATGAAGGTCCAAAGGGACCCTGTCCAAGAAGCTCTGTTGCTTCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATGAAGGTCCAAAGGGACCCTGTCCAAGAAGCTCTGTTGCTTCTTC  500

seq1  TGCCCATGTGCTCTCCTGTGTAGCCTGGTGTCAGTGATCCCAAGATCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGTGCTCTCCTGTGTAGCCTGGTGTCAGTGATCCCAAGATCCTG  550

seq1  GGTGTGCTAGGGCCTGTAGTGATTGTGTCCAATATGGTGCGGGGCTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCTAGGGCCTGTAGTGATTGTGTCCAATATGGTGCGGGGCTGGCA  600

seq1  CTGACTGGAACAAACCCCAGCTGCTGGTTGGGTGGGTTTCCTTTGTCCCT  650
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGACTGGAACAAACCCCAGCTGCTGGTTGGGTGGGTTTTCTTTGTCCCT  650

seq1  GTTCATGCTGGCACAAGACCTTCTGGGATTTTTTTAAACATATG-TTGCA  699
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTTCATGCTGGCACAAGACCTTCTGGGATTTTTTTAAACATATGTTTGCA  700

seq1  TTCCACTCAACAGTGATCCCCAGATCCTGGGTGTGCTAGGGTCCGCTGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTCAACAGTGATCCCCAGATCCTGGGTGTGCTAGGGTCCGCTGAG  750

seq1  TTTGCACCCAAGATGAGTATTTTATTCTTTAGAAGAAGACTTGGGTTAAA  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTGCACCCAAGATGAGTATTTTATTCTTTAGAGGAAGACTTGGGTTAAA  800

seq1  AGCAAGATGCCATGATAAAGCAGATCTAATTCAAGGGCTACCACAAGCAT  849
      ||||||||||||||||||||||||||||| ||||||||||||||||||| 
seq2  AGCAAGATGCCATGATAAAGCAGATCTAA-TCAAGGGCTACCACAAGCA-  848

seq1  TTCTCAGAGAGACTGCAGTGAGAGAACTTATTTTTCTAAATTCATTATTT  899
      |||||||||||||||||||||||| ||||| ||||||  | |||||| ||
seq2  TTCTCAGAGAGACTGCAGTGAGAG-ACTTA-TTTTCT--AGTCATTA-TT  893

seq1  ATTGACAATCATGAGACTAGGAAGTGACAAATATAA  935
      |||||| ||| ||||||||||||||||| |||||||
seq2  ATTGAC-ATC-TGAGACTAGGAAGTGAC-AATATAA  926