MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-050L12
Chromosome	1 (Build37)
Map Location	76,479,237 - 76,480,491
singlet/doublet	singlet
Overlap gene	none
Upstream gene	A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream gene	LOC100039137, Tfdp1-ps, Epha4
Link	Open Mouse BAC browser

Click to get alignment info.

name	A230078I05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319998 MGI:2443133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AW822216 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98733 MGI:2138628
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Inha (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16322 MGI:96569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stk11ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71728 MGI:1918978
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc4a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20536 MGI:109350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039069 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039069
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC383531 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins pseudo : _no_value

name	LOC100039137 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein pseudo : _no_value

name	Tfdp1-ps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21782 MGI:109560
definition	note : transcription factor Dp 1, pseudogene pseudo : _no_value

name	Epha4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13838 MGI:98277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230078I05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386564 GeneID:319998 MGI:2443133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A230078I05 gene transcript_id : NM_177056.3

name	AW822216 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802473 GeneID:98733 MGI:2138628
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AW822216 transcript_id : NM_178884.3

name	Inha (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130058 GeneID:16322 MGI:96569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibin alpha transcript_id : NM_010564.4

name	Stk11ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254180 GeneID:71728 MGI:1918978
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/threonine kinase 11 interacting protein transcript_id : NM_027886.2

name	Slc4a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378544 GeneID:20536 MGI:109350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 4 (anion exchanger), member 3 transcript_id : NM_009208.2

name	Epha4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86788142 GeneID:13838 MGI:98277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A4 transcript_id : NM_007936.3

name	A230078I05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28892951 CCDS:CCDS15076.1 GeneID:319998 MGI:2443133
definition	codon_start : 1 product : hypothetical protein LOC319998 protein_id : NP_796030.1

name	AW822216 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725726 CCDS:CCDS15077.1 GeneID:98733 MGI:2138628
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC98733 protein_id : NP_849215.1

name	Inha (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254367 CCDS:CCDS15078.1 GeneID:16322 MGI:96569
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] [Evidence IEA] GO_function : GO:0017106 - activin inhibitor activity [Evidence ISS]; GO:0005125 - cytokine activity [Evidence ISS]; GO:0008083 - growth factor activity [Evidence ISS] [Evidence IEA]; GO:0005179 - hormone activity [Evidence ISS] [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0007050 - cell cycle arrest [Evidence ISS]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0007166 - cell surface receptor linked signal transduction [Evidence ISS]; GO:0007267 - cell-cell signaling [Evidence ISS]; GO:0030218 - erythrocyte differentiation [Evidence ISS]; GO:0042541 - hemoglobin biosynthesis [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0045578 - negative regulation of B cell differentiation [Evidence ISS]; GO:0046882 - negative regulation of follicle-stimulating hormone secretion [Evidence ISS]; GO:0045077 - negative regulation of interferon-gamma biosynthesis [Evidence ISS]; GO:0045650 - negative regulation of macrophage differentiation [Evidence ISS]; GO:0042326 - negative regulation of phosphorylation [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0001541 - ovarian follicle development [Evidence ISS]; GO:0046881 - positive regulation of follicle-stimulating hormone secretion [Evidence ISS] codon_start : 1 product : inhibin alpha protein_id : NP_034694.3

name	Stk11ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254181 CCDS:CCDS15079.1 GeneID:71728 MGI:1918978
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : serine/threonine kinase 11 interacting protein protein_id : NP_082162.2

name	Slc4a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678023 CCDS:CCDS15080.1 GeneID:20536 MGI:109350
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015380 - anion exchanger activity [Evidence IEA]; GO:0015297 - antiporter activity [Evidence IEA]; GO:0005386 - carrier activity [Evidence IEA]; GO:0005452 - inorganic anion exchanger activity [Evidence IEA] GO_process : GO:0006820 - anion transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : anion exchanger 3 cardiac isoform product : solute carrier family 4 (anion exchanger), member 3 protein_id : NP_033234.1

name	Epha4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328113 GeneID:13838 MGI:98277
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007628 - adult walking behavior [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : rabbit; snoRNA MBII-267 product : Eph receptor A4 protein_id : NP_031962.2

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 1 pseudo : _no_value

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 2 pseudo : _no_value

name	LOC100039069 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039069
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:207177
definition	standard_name : AW822216

name	(CDS detail)
type	STS
link
xref	UniSTS:378213
definition	standard_name : REN53413

name	(CDS detail)
type	STS
link
xref	UniSTS:298224
definition	standard_name : ECD17211

name	(CDS detail)
type	STS
link
xref	UniSTS:128466
definition	standard_name : D1Mit131

name	(CDS detail)
type	STS
link
xref	UniSTS:142241
definition	standard_name : D1Mcg8

name	(CDS detail)
type	STS
link
xref	UniSTS:143587
definition	standard_name : Inha

name	(CDS detail)
type	STS
link
xref	UniSTS:178415
definition	standard_name : AW555078

name	(CDS detail)
type	STS
link
xref	UniSTS:207229
definition	standard_name : C87829

name	(CDS detail)
type	STS
link
xref	UniSTS:185441
definition	standard_name : BB131189

name	(CDS detail)
type	STS
link
xref	UniSTS:234150
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:116254
definition	standard_name : D1Mit46

name	(CDS detail)
type	STS
link
xref	UniSTS:125297
definition	standard_name : MHAa70h12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:302807
definition	standard_name : ECD21815

name	(CDS detail)
type	STS
link
xref	UniSTS:378971
definition	standard_name : REN54171

name	(CDS detail)
type	STS
link
xref	UniSTS:207172
definition	standard_name : C86447

name	(CDS detail)
type	STS
link
xref	UniSTS:128689
definition	standard_name : D1Mit331

name	(CDS detail)
type	STS
link
xref	UniSTS:128637
definition	standard_name : D1Mit284

name	(CDS detail)
type	STS
link
xref	UniSTS:228347
definition	standard_name : D9Rat170

name	(CDS detail)
type	STS
link
xref	UniSTS:128691
definition	standard_name : D1Mit333

name	(CDS detail)
type	STS
link
xref	UniSTS:128851
definition	standard_name : D1Mit484

name	(CDS detail)
type	STS
link
xref	UniSTS:128850
definition	standard_name : D1Mit483.1

name	(CDS detail)
type	STS
link
xref	UniSTS:128849
definition	standard_name : D1Mit437

name	(CDS detail)
type	STS
link
xref	UniSTS:128468
definition	standard_name : D1Mit133

name	(CDS detail)
type	STS
link
xref	UniSTS:128936
definition	standard_name : D1Mit437

name	(CDS detail)
type	STS
link
xref	UniSTS:125238
definition	standard_name : MHAa59g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128501
definition	standard_name : D1Mit162

name	(CDS detail)
type	STS
link
xref	UniSTS:128805
definition	standard_name : D1Mit436

name	(CDS detail)
type	STS
link
xref	UniSTS:122771
definition	standard_name : 04.MMHAP27FLB1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:128467
definition	standard_name : D1Mit132

name	(CDS detail)
type	STS
link
xref	UniSTS:123991
definition	standard_name : 32.MMHAP5FLC5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124058
definition	standard_name : 33.MMHAP94FRC12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:234159
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:178416
definition	standard_name : AI385584

name	(CDS detail)
type	STS
link
xref	UniSTS:128690
definition	standard_name : D1Mit332

name	LOC383531 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234114 GeneID:383531
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins product : similar to Rpl7a protein pseudo : _no_value transcript_id : XR_030615.1

name	LOC100039137 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234115 GeneID:100039137
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to Ac2-210 pseudo : _no_value transcript_id : XR_030663.1

clone name	MSMg01-335F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-046M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481J12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-457I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-050L12.b
ACC	DH874579
length	1,227
definition	DH874579\|Mus musculus domesticus DNA, BAC clone: B6Ng01-050L12, 5' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccatcctctaaggaggagatgggagctgagggcgcttggccaggt gtctgcagggagacaaaggaagaaaacacacctcaccactggagaatgag ggacttgctgaaagcaatggatagacaactagttttgaggcggtgcctaa gtgcttacatgactcagacacccctcttgaaacatcctaagtttagagac aattggaaatccggacgacttgccaatacataagatatagcatatttatt tgctggcgtggtattcagcagtcaaaagcagtgcattaagtttacacaaa ctggcatggatcaatctcaaaaaacaaaccaccgaatagaaacacaactt gcagacaacatatgcagcatggtggcatttgactaaaaaaagaagaagaa atagcatgtatacacacacacacacacacacacacacacacacaaaacat atatttctctaggcatgtacatatccataggtgaatcatgaaaacatgct ttttgggtaaatcagttttaatttttccaagaatattaatactaccccat gggcaacgtatgtcaataccttgaggaagtaatttttctcagtctcttga attatcttaactggctaactgtcagcttttggacacagaaatctacacgt aggggagaatgtataacctatatttacacactatcagtattttttattaa gttagagagcatagaattactttaaaatctaaaaggacatcttcccaact caccagcgaatagtctgaaggatcctttgagcagattgtaaaagagtctg gacatgtgaataaaaaagattaagccaattttcaatgattttgagaataa atagattaaaataataatagtctacactatgtcctgaatcctgatcataa gacaggcactcataggcattttacatgccttagtgcattcaactttcatg taacttcagtagtcgcatctcactacaaatactctctttaatgtgagaaa cgctgcccaaggaaattgtgggaagtggaggaccagcatgagaatctcag cagatttgtggtccaccagtgtgccaggtgcttctccactctgctttgat aacagaagccatgcctactctcttggaactgacaacctagcctctaggcc atggtctagaatatagaacatgaactgaatccgttcgttgaacctggtaa gttatatacaaaaacatctcagacctg
quality values	Open. Hide. 61 47 35 36 61 61 38 20 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 49 15 52 59 52 43 43 52 59 59 61 59 61 61 59 61 61 61 61 61 61 61 44 59 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 50 50 50 61 50 61 50 61 53 61 61 61 53 61 53 61 53 61 61 61 61 61 61 61 53 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 53 53 61 61 53 53 61 52 61 53 61 53 61 47 53 57 53 57 57 57 57 57 57 57 53 57 57 57 47 42 57 57 53 57 57 57 57 53 47 47 57 47 57 57 53 57 57 57 50 57 57 53 57 57 57 57 53 53 53 57 57 53 53 53 53 34 53 47 57 53 52 50 52 52 52 53 53 53 47 47 47 47 52 50 47 47 53 57 57 57 53 50 57 53 53 53 53 57 57 53 52 50 50 53 50 43 43 52 52 52 35 31 46 43 57 43 45 43 52 39 57 57 41 46 52 53 43 45 43 46 53 53 50 50 50 53 47 46 37 53 53 40 52 33 52 40 50 53 50 57 57 30 37 42 53 44 53 57 36 52 40 33 53 57 33 33 53 57 50 53 35 30 46 40 40 52 57 23 38 48 40 40 45 28 45 32 39 37 31 57 57 46 46 36 48 57 33 57 24 48 39 36 45 39 57 33 53 44 44 44 51 46 36 53 27 53 33 40 37 47 41 41 29 40 27 36 25 57 57 57 57 47 21 16 36 34 43 33 36 41 37 40 53 37 41 30 30 25 44 29 29 41 36 28 31 28 31 30 51 40 34 51 45 31 30 36 35 16 46 47 41 27 31 27 28 20 44 39 28 17 18 36 29 22 31 29 44 29 28 29 31 25 28 38 30 36 33 31 34 30 29 25 17 16 8 7 16 9 22 17 24 29 28 51 24 24 29 19 29 24 6 22 8 31 30 17 29 51 46 39 17 40 9 26 33 33 35 29 22 12 16 28 28 27 29 36 25 32 28 51 51 46 46 30 13 41 15 29 22 26 21 29 29 26 11 8 46 51 23 29 19 29 22 29 23 16 46 46 26 20 19 7 10 36 12 17 41 27 15 12 17 29 23 14 31 46 41 32 24 28 29 23 12 32 24 29 28 28 33 19 23 22 10 23 27 28 27 31 27 20 21 17 29 19 22 16 18 28 25 28 26 28 21 17 24 22 31 13 15 10 14 18 29 15 15 23 25 25 23 12 10 17 25 16 24 32 51 51 21 23 28 18 21 29 17 22 14 12 22 19 23 29 15 23 19 27 24 22 24 25 22 38 25 16 21 17 38 19 27 19 22 16 24 19 5 6 8 28 33 22 4 4 7 22 16 30 6 16 14 22 19 9 10 4 42 13 11 31 31 23 29 22 22 13 39 20 35 30 7 19 6 9 14 7 17 38 30 11 23 7 20 22 11 15 4 6 5 13 19 12 42 21 15 18 24 6 10 22 22 7 15 9 16 12 15 6 5 17 29 5 16 13 12 13 12 30 12 12 10 23 27 6 11 18 29 23 5 11 4 6 29 17 33 11 15 9 12 16 6 23 11 26 8 17 5 4 4 7 5 8 3 4 5 10 5 4 9 6 5 6 5 3 5 8 8 7 6 7 9 12 14 15 27 23 11 9 4 3 4 5 20 4 4 4 7 5 12 9 9 5 10 6 11 6 7 5 6 3 6 7 7 19 8 18 18 10 13 10 7 3 4 6 6 21 8 11 4 6 10 8 9 14 10 11 13 4 3 3 1 3 6 5 4 4 6 3 6 16 4 7 13 4 4 18 6 3 5 12 10 5 4 3 6 17 3 4 15 6 3 4 4 3 4 1 5 4 19 7 16 6 13 6 3 4 7 5 4 3 3 11 6 5 4 4 8 3 7 16 13 13 3 3 4 14 4 3 10 9 3 5 5 8 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_76479237_76480491
seq2: B6Ng01-050L12.b_44_1270 (reverse)

seq1  CAGGTCTGGAGATG-TTTTGTATAAACCATCACAGGTCTCCAACCAGGAA  49
      ||||||| |||||| ||||||||| | | |  ||||  | ||||   |||
seq2  CAGGTCT-GAGATGTTTTTGTATATAACTTACCAGG--TTCAAC---GAA  44

seq1  CAGAATCCACGTCATGTTC-ATATTCTAGACACTATGCCCTAGAGGCTAG  98
      | | || ||  |||||||| |||||||||  || ||| ||||||||||||
seq2  C-GGATTCAGTTCATGTTCTATATTCTAG--ACCATGGCCTAGAGGCTAG  91

seq1  TGTGCTCAGTTTCCAAGAAGAGTAGGCATGGCCTCTTTGTCATCAAAGCA  148
       ||  |||| ||||||| |||||||||||||| ||  ||| |||||||||
seq2  -GTTGTCAG-TTCCAAG-AGAGTAGGCATGGCTTC--TGTTATCAAAGCA  136

seq1  GAGTTGTAGGAGCCACTGGGGCCACACTGGTTGGACACAAATCTGGCTGA  198
      ||| || || |||  ||||   ||||||||| |  ||||||||| |||||
seq2  GAG-TGGAGAAGCACCTGG---CACACTGGTGGACCACAAATCT-GCTGA  181

seq1  GATTCTCAATGCTGGTTCCTCCACTTCCCACAATTTCCCTTTGGGCAGCC  248
      ||||||| ||||||| ||||||||||||||||||||||  |||||||| |
seq2  GATTCTC-ATGCTGG-TCCTCCACTTCCCACAATTTCC--TTGGGCAG-C  226

seq1  GTTTCTCACATTTTAAAGAGAGTATTTGGTAGTGAGGATGCCGACTACCT  298
      ||||||||||  ||||||||||||||| ||||||| |||| |||||| ||
seq2  GTTTCTCACA--TTAAAGAGAGTATTT-GTAGTGA-GATG-CGACTA-CT  270

seq1  GAAGTTACATGAAAGTTGAATGCACTAAGGCATGTAAAATGCCTATGAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTACATGAAAGTTGAATGCACTAAGGCATGTAAAATGCCTATGAGT  320

seq1  GCCTGTCTTATGATCAGGATTCAGGACATAGTGTAGACTATTATTATTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCTTATGATCAGGATTCAGGACATAGTGTAGACTATTATTATTTT  370

seq1  AATCTATTTATTCTCAAAATCATTGAAAATTGGCTTAATCTTTTTTATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTTATTCTCAAAATCATTGAAAATTGGCTTAATCTTTTTTATTC  420

seq1  ACATGTCCAGACTCTTTTACAATCTGCTCAAAGGATCCTTCAGACTATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTCCAGACTCTTTTACAATCTGCTCAAAGGATCCTTCAGACTATTC  470

seq1  GCTGGTGAGTTGGGAAGATGTCCTTTTAGATTTTAAAGTAATTCTATGCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGAGTTGGGAAGATGTCCTTTTAGATTTTAAAGTAATTCTATGCT  520

seq1  CTCTAACTTAATAAAAAATACTGATAGTGTGTAAATATAGGTTATACATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACTTAATAAAAAATACTGATAGTGTGTAAATATAGGTTATACATT  570

seq1  CTCCCCTACGTGTAGATTTCTGTGTCCAAAAGCTGACAGTTAGCCAGTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTACGTGTAGATTTCTGTGTCCAAAAGCTGACAGTTAGCCAGTTA  620

seq1  AGATAATTCAAGAGACTGAGAAAAATTACTTCCTCAAGGTATTGACATAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATTCAAGAGACTGAGAAAAATTACTTCCTCAAGGTATTGACATAC  670

seq1  GTTGCCCATGGGGTAGTATTAATATTCTTGGAAAAATTAAAACTGATTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCCATGGGGTAGTATTAATATTCTTGGAAAAATTAAAACTGATTTA  720

seq1  CCCAAAAAGCATGTTTTCATGATTCACCTATGGATATGTACATGCCTAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAAGCATGTTTTCATGATTCACCTATGGATATGTACATGCCTAGA  770

seq1  GAAATATATGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATATGTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATAC  820

seq1  ATGCTATTTCTTCTTCTTTTTTTAGTCAAATGCCACCATGCTGCATATGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTTCTTCTTCTTTTTTTAGTCAAATGCCACCATGCTGCATATGT  870

seq1  TGTCTGCAAGTTGTGTTTCTATTCGGTGGTTTGTTTTTTGAGATTGATCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAAGTTGTGTTTCTATTCGGTGGTTTGTTTTTTGAGATTGATCC  920

seq1  ATGCCAGTTTGTGTAAACTTAATGCACTGCTTTTGACTGCTGAATACCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGTTTGTGTAAACTTAATGCACTGCTTTTGACTGCTGAATACCAC  970

seq1  GCCAGCAAATAAATATGCTATATCTTATGTATTGGCAAGTCGTCCGGATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCAAATAAATATGCTATATCTTATGTATTGGCAAGTCGTCCGGATT  1020

seq1  TCCAATTGTCTCTAAACTTAGGATGTTTCAAGAGGGGTGTCTGAGTCATG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTGTCTCTAAACTTAGGATGTTTCAAGAGGGGTGTCTGAGTCATG  1070

seq1  TAAGCACTTAGGCACCGCCTCAAAACTAGTTGTCTATCCATTGCTTTCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACTTAGGCACCGCCTCAAAACTAGTTGTCTATCCATTGCTTTCAG  1120

seq1  CAAGTCCCTCATTCTCCAGTGGTGAGGTGTGTTTTCTTCCTTTGTCTCCC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCCTCATTCTCCAGTGGTGAGGTGTGTTTTCTTCCTTTGTCTCCC  1170

seq1  TGCAGACACCTGGCCAAGCGCCCTCAGCTCCCATCTCCTCCTTAGAGGAT  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACACCTGGCCAAGCGCCCTCAGCTCCCATCTCCTCCTTAGAGGAT  1220

seq1  GGAATTC  1255
      |||||||
seq2  GGAATTC  1227

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information