BAC Information

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BAC

Clone NameB6Ng01-052K19
Chromosome1 (Build37)
Map Location 115,011,137 - 115,011,979
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626897, LOC666615, LOC666635
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052K19.bB6Ng01-052K19.g
ACCDH875955DH875956
length8461,025
definitionDH875955|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K19, 5' end.DH875956|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcaagactgaagtatgttgtcttgaaaccacgcagatgactga
ctaatccttatcataacacaacactaaacctcactttaccccactacaat
ttatcttcatttcagtgagccacagcttcctgaagttctcaacaaaaata
attgcttcaaagatagatgatagatagactgatagtgatagatacatgga
aattgatagaatataaatatagatgacagacagaaggacatatagaaaga
tgactatatatatatatatatatatatatatatatatatatatatatata
ttaattagaatgaacatttagagtttggtattgttccattgctatgcaaa
gccatttgcatatgctcatttcttaaggactccctgtaattaacaagtac
attttcttaggaaatttcagcaaccactgaataggtaagacattaatatg
cttctatggtcatcacatgcagaccatatcctctgagtttgcaaaatgcc
aactgtatttgagtctctatataaacatataaacatcagggtcttcagag
actccagagtcataaaatgactcagaattaatgtgataagaatgatgccc
tttacaaaggggtttttgccacagactggactcagtccatccttcaacct
gtggggaaacaagattttcagtaatttaggtgagcaaggagtcggcacag
atgacaatcagacatggacaccagagagaggggttgtatctgaatgtcat
ttctcaaagcaagcatcctattttttaatacagaagaaaataaagaagtt
aggtgacacatcagccaaagtacaatgaggttactggatacttaat
gaattcctttctggggatccaagaatgttagaagaacagttagtcttaag
aatgctagctgtagcatttgttgtatagtctccgtgggatggaataatat
agagtttaattgaagtcctgttggctcagcctaaaatgctggatgagtgg
agttagctggggtacacatccttccttgaagtcattctggaagaaaggct
cccaacaaatagcattgaagcagtctgtacatgaatcaatcatcttagca
ttcccaaaagtgaatcatgttagcactgcgttgttgttgttattgttgtt
gtcattttctttgaatataatttctcaaaagtaatacatagctctgtacc
aacaatatatgaaatgtgcaaggtatacaatttagcttaagctaactctt
ttctctccatctgagcaggtgaagggcatctgtcttttgtaagttagctt
gacttacaacaaaaactgtaatgtaaatttgtatctattccagtagaaaa
gatgacacgataagtctggaagattttgtagtcaaagaattattggcaag
acaggttctgggtggagatatatacatgtgccgatctgttttcagagctg
ttttcaaaagaggctttagcattatatattacttactcctttggtccttt
tggttttctcctttctttgcagctaaggaattcaggaggtctcacaccat
aaaaatatgattattatttattttggattgaatccagagccttgtcctac
cctattttctatagactgaaacttaaatcctctctctctacataacagat
ctttttatacagccagcagtttgaagacttattaggtatagcctgattca
tttctttatccagaacttcatttcacctctgtaaagaggatgtatataat
cacaatactattgaatatataggcatttcattttaatagtcaaatgagga
tggtaggacttcaatattctcctctcttatgaaataatgatcactattgg
tgagaaccatgtttcttattggctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_115011137_115011979
seq2: B6Ng01-052K19.b_42_887

seq1  GAATTCTTCAAGACTGAAGTATGTTGTCTTGAAACCACGCAGATGACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAAGACTGAAGTATGTTGTCTTGAAACCACGCAGATGACTGA  50

seq1  CTAATCCTTATCATAACACAACACTAAACCTCACTTTACCCCACTACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCTTATCATAACACAACACTAAACCTCACTTTACCCCACTACAAT  100

seq1  TTATCTTCATTTCAGTGAGCCACAGCTTCCTGAAGTTCTCAACAAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTCATTTCAGTGAGCCACAGCTTCCTGAAGTTCTCAACAAAAATA  150

seq1  ATTGCTTCAAAGATAGATGATAGATAGACTGATAGTGATAGATACATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTTCAAAGATAGATGATAGATAGACTGATAGTGATAGATACATGGA  200

seq1  AATTGATAGAATATAAATATAGATGACAGACAGAAGGACATATAGAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAGAATATAAATATAGATGACAGACAGAAGGACATATAGAAAGA  250

seq1  TGACTATATATATATATATATATATATATATATATATATATATATATATA  300
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAC--TATATATATATATATATATATATATATATATATATATATATATA  298

seq1  TATTAATTAGAATGAACATTTAGAGTTTGGTATTGTTCCATTGCTATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATTAGAATGAACATTTAGAGTTTGGTATTGTTCCATTGCTATGCA  348

seq1  AAGCCATTTGCATATGCTCATTTCTTAAGGACTCCCTGTAATTAACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATTTGCATATGCTCATTTCTTAAGGACTCCCTGTAATTAACAAGT  398

seq1  ACATTTTCTTAGGAAATTTCAGCAACCACTGAATAGGTAAGACATTAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCTTAGGAAATTTCAGCAACCACTGAATAGGTAAGACATTAATA  448

seq1  TGCTTCTATGGTCATCACATGCAGACCATATCCTCTGAGTTTGCAAAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTATGGTCATCACATGCAGACCATATCCTCTGAGTTTGCAAAATG  498

seq1  CCAACTGTATTTGAGTCTCTATATAAACATATAAACATCAGGGTCTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTGTATTTGAGTCTCTATATAAACATATAAACATCAGGGTCTTCAG  548

seq1  AGACTCCAGAGTCATAAAATGACTCAGAATTAATGTGATAAGAATGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCAGAGTCATAAAATGACTCAGAATTAATGTGATAAGAATGATGC  598

seq1  CCTTTACAAAGGGG-TTTTGCCACAGACTGGACTCAGTCCATCCTTCAAC  649
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CCTTTACAAAGGGGTTTTTGCCACAGACTGGACTCAGTCCATCCTTCAAC  648

seq1  CTGTGGGGAAACAAGA-TTTCAGTAA-TTAGGTGAGCAAGGAGTCGGCAC  697
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  CTGTGGGGAAACAAGATTTTCAGTAATTTAGGTGAGCAAGGAGTCGGCAC  698

seq1  AGATGACAATCAGACATGGACACCAGAGAGA-GGGTTGTATCTGAATGTC  746
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGATGACAATCAGACATGGACACCAGAGAGAGGGGTTGTATCTGAATGTC  748

seq1  ATTTCTCAAAGCAAGCATCCTA-TTTTTAATACAGAAGAAAATAAAGAAG  795
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATTTCTCAAAGCAAGCATCCTATTTTTTAATACAGAAGAAAATAAAGAAG  798

seq1  TTAGGTGACACATCAGCCAAAGTACAATGAGGTTACTGGATACTTAAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGACACATCAGCCAAAGTACAATGAGGTTACTGGATACTTAAT  846