BAC Information

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BAC

Clone NameB6Ng01-053L24
Chromosome1 (Build37)
Map Location 148,427,215 - 148,552,642
singlet/doubletdoublet
Overlap geneB830045N13Rik
Upstream geneLOC383571
Downstream geneLOC100043240
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053L24.bB6Ng01-053L24.g
ACCDH876705DH876706
length1,153653
definitionDH876705|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L24, 5' end.DH876706|Mus musculus domesticus DNA, BAC clone: B6Ng01-053L24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,427,215 - 148,428,370)(148,551,990 - 148,552,642)
sequence
gaattctttctattacagatgtattcactatgttcaatctatcttgtaga
gcatttgcatcccactcttcatataaatcacctaaggaagcctggttcct
aaaaaaaaaaaatcatttctatatgttacagtatctgataaaactacata
attttcaaaatgtcaatttgatttcttcaacttttaataaaatcatttta
gtatatatgtggtagctcatgcctgtaactgagcacaagaaactgaggca
ggaagcttaggttgagttttaggccacctggaactaaatactgaatttga
ggccatcccagagccccaagcaagtgatgatcaactgattgacagttgat
ccccgtatgtcatagtgcagcccataaaaatggccttatgccaccacaca
gattcatcataggaagaaacacaaactagggactattttttctattatcc
atgatatagatagaacaaagacacttaggaaatgtgtccatgtctcattt
ctcctggccagaagtcctgctttgtctcaaccaaagagaatctgttcatc
ttatcaactactgcagtttacatcagccactacaaactatccatgactga
ggcccattctgaatgtaacaccaactgcctatgcacactcaacattagaa
ctttcttccacctcaaactccaggatgagaggttatttgtcagcacaaca
cttctctacttacaagtttctctacttttcttttggagatttttgcagtc
tgctcttccctgcagacattacagcattcattaaaaactccccctcacaa
aacacagaaagatatttttcttcagtatttatttgaacaattaaatggat
aatttctcttcaatttatgttattttactgttattcttccaacattagaa
ttaatatccaaacacatattagaaataggtattattttttactctaattt
gtctgttgtattgcaagtttactgagctgagatgcagtagagtcttattc
attaaattatcttagtgagagatagaggaggtaataatatttgtagaacg
tgagaaatgacagcttctaccacaacattcttgatgactgcatgatggag
ggatgaagaaagaaggagatgacccccattgccttgtttgatttggccag
caa
gaattcacacgaataaagttggcatgattgtgcagttctaattgtatttt
tgttgatgtctgatagtctcatttgtgtttatttttagcagtactttgcc
ttttaaattttgagaattgagaggcaaaaccactcaacatttatttgaga
aataaaatgcccaatacatggtactttgaacacacattatattccaacca
ggaaactgcattttcttattctaataccagctattatataataaatataa
tataatcaatataataatgtaatattttaaaataattaatgaaaactcta
aagatttaatgaaaaacttaaatttagttttaatacagtaaaacaactgt
ttgtattcaaatatttacttcacatcattgattttatttttttattctat
aattgtttatttgcttgtttatgtatagagaagtggtaagtgattggata
tgagttggagtggtttccttaaagtagcttggtgccatttattttaaatt
gtgtttggatgctattgaacatctatctcattaccctttaatcaccttta
ccatgtttacactgttatttatggattgtttactatatgtataatcatac
acaaacattttttaatccatataaggatcatttttagtggagctgtacct
taa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148427215_148428370
seq2: B6Ng01-053L24.b_42_1194

seq1  GAATTCTTTCTATTACAGATGTATTCACTATGTTCAATCTATCTTGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTATTACAGATGTATTCACTATGTTCAATCTATCTTGTAGA  50

seq1  GCATTTGCATCCCACTCTTCATATAAATCACCTAAGGAAGCCTGGTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGCATCCCACTCTTCATATAAATCACCTAAGGAAGCCTGGTTCCT  100

seq1  AAAAAAAAAAAATCATTTCTATATGTTACAGTATCTGATAAAACTACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAATCATTTCTATATGTTACAGTATCTGATAAAACTACATA  150

seq1  ATTTTCAAAATGTCAATTTGATTTCTTCAACTTTTAATAAAATCATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAAATGTCAATTTGATTTCTTCAACTTTTAATAAAATCATTTTA  200

seq1  GTATATATGTGGTAGCTCATGCCTGTAACTGAGCACAAGAAACTGAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATGTGGTAGCTCATGCCTGTAACTGAGCACAAGAAACTGAGGCA  250

seq1  GGAAGCTTAGGTTGAGTTTTAGGCCACCTGGAACTAAATACTGAATTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTTAGGTTGAGTTTTAGGCCACCTGGAACTAAATACTGAATTTGA  300

seq1  GGCCATCCCAGAGCCCCAAGCAAGTGATGATCAACTGATTGACAGTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCCCAGAGCCCCAAGCAAGTGATGATCAACTGATTGACAGTTGAT  350

seq1  CCCCGTATGTCATAGTGCAGCCCATAAAAATGGCCTTATGCCACCACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTATGTCATAGTGCAGCCCATAAAAATGGCCTTATGCCACCACACA  400

seq1  GATTCATCATAGGAAGAAACACAAACTAGGGACTATTTTTTCTATTATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCATAGGAAGAAACACAAACTAGGGACTATTTTTTCTATTATCC  450

seq1  ATGATATAGATAGAACAAAGACACTTAGGAAATGTGTCCATGTCTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATATAGATAGAACAAAGACACTTAGGAAATGTGTCCATGTCTCATTT  500

seq1  CTCCTGGCCAGAAGTCCTGCTTTGTCTCAACCAAAGAGAATCTGTTCATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGCCAGAAGTCCTGCTTTGTCTCAACCAAAGAGAATCTGTTCATC  550

seq1  TTATCAACTACTGCAGTTTACATCAGCCACTACAAACTATCCATGACTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAACTACTGCAGTTTACATCAGCCACTACAAACTATCCATGACTGA  600

seq1  GGCCCATTCTGAATGTAACACCAACTGCCTATGCACACTCAACATTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATTCTGAATGTAACACCAACTGCCTATGCACACTCAACATTAGAA  650

seq1  CTTTCTTCCACCTCAAACTCCAGGATGAGAGGTTATTTGTCAGCACAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCCACCTCAAACTCCAGGATGAGAGGTTATTTGTCAGCACAACA  700

seq1  CTTCTCTACTTACAAGTTTCTCTACTTTTCTTTTGGAGATTTTTGCAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTACTTACAAGTTTCTCTACTTTTCTTTTGGAGATTTTTGCAGTC  750

seq1  TGCTCTTCCCTGCAGACATTACAGCATTCATTAAAAACTCCCCCTCACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCCTGCAGACATTACAGCATTCATTAAAAACTCCCCCTCACAA  800

seq1  AACACAGAAAGATATTTTTCTTCAGTATTTATTTGAACAATTAAATGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGAAAGATATTTTTCTTCAGTATTTATTTGAACAATTAAATGGAT  850

seq1  AATTTCTCTTCAATTTATGTTATTTTACTGTTATTCTTCCAACATTAGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCTTCAATTTATGTTATTTTACTGTTATTCTTCCAACATTAGAA  900

seq1  TTAATATCCAAACACATATTAGAAATAGGTATTATTTTTTACTCTAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATCCAAACACATATTAGAAATAGGTATTATTTTTTACTCTAATTT  950

seq1  GTCTGTTGTATTGCAAGTTTACTGAGCTGAGATGCAGTAGGAAGTCTTAT  1000
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  GTCTGTTGTATTGCAAGTTTACTGAGCTGAGATGCAGTAG--AGTCTTAT  998

seq1  TCATTAAATTATCTTAGTGAGAGATAGAGGAAGGTAATAATA-TTGTAGA  1049
      |||||||||||||||||||||||||||||| ||||||||||| |||||||
seq2  TCATTAAATTATCTTAGTGAGAGATAGAGG-AGGTAATAATATTTGTAGA  1047

seq1  ACGTGAGAAATGACAGCTCTTACACAC-ACATACATGATGACTGGCATGA  1098
      ||||||||||||||||||  ||| ||| |||| | |||||||| ||||||
seq2  ACGTGAGAAATGACAGCTTCTAC-CACAACATTCTTGATGACT-GCATGA  1095

seq1  ATTGGAAGTGGAATG-AGAAAGA--GAGATGACACCACATGCCTTGTTTG  1145
        ||||   || ||| |||||||  |||||||| ||   |||||||||||
seq2  --TGGA---GGGATGAAGAAAGAAGGAGATGACCCCCATTGCCTTGTTTG  1140

seq1  ATT--GACAGCAA  1156
      |||  | ||||||
seq2  ATTTGGCCAGCAA  1153

seq1: chr1_148551990_148552642
seq2: B6Ng01-053L24.g_68_720 (reverse)

seq1  TTAATGTACAGCTCCACTAAAAATGATCCTTATATGGATTAAAAAATGTT  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTACAGCTCCACTAAAAATGATCCTTATATGGATTAAAAAATGTT  50

seq1  TGTGTATGATTATACATATAGTAAACAATCCATAAATAACAGTGTAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGATTATACATATAGTAAACAATCCATAAATAACAGTGTAAACA  100

seq1  TGGTAAAGGTGATTAAAGGGTAATGAGATAGATGTTCAATAGCATCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAGGTGATTAAAGGGTAATGAGATAGATGTTCAATAGCATCCAAA  150

seq1  CACAATTTAAAATAAATGGCACCAAGCTACTTTAAGGAAACCACTCCAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTTAAAATAAATGGCACCAAGCTACTTTAAGGAAACCACTCCAAC  200

seq1  TCATATCCAATCACTTACCACTTCTCTATACATAAACAAGCAAATAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATCCAATCACTTACCACTTCTCTATACATAAACAAGCAAATAAACA  250

seq1  ATTATAGAATAAAAAAATAAAATCAATGATGTGAAGTAAATATTTGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGAATAAAAAAATAAAATCAATGATGTGAAGTAAATATTTGAATA  300

seq1  CAAACAGTTGTTTTACTGTATTAAAACTAAATTTAAGTTTTTCATTAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTTGTTTTACTGTATTAAAACTAAATTTAAGTTTTTCATTAAAT  350

seq1  CTTTAGAGTTTTCATTAATTATTTTAAAATATTACATTATTATATTGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGTTTTCATTAATTATTTTAAAATATTACATTATTATATTGATT  400

seq1  ATATTATATTTATTATATAATAGCTGGTATTAGAATAAGAAAATGCAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATATTTATTATATAATAGCTGGTATTAGAATAAGAAAATGCAGTT  450

seq1  TCCTGGTTGGAATATAATGTGTGTTCAAAGTACCATGTATTGGGCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTTGGAATATAATGTGTGTTCAAAGTACCATGTATTGGGCATTTT  500

seq1  ATTTCTCAAATAAATGTTGAGTGGTTTTGCCTCTCAATTCTCAAAATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCAAATAAATGTTGAGTGGTTTTGCCTCTCAATTCTCAAAATTTA  550

seq1  AAAGGCAAAGTACTGCTAAAAATAAACACAAATGAGACTATCAGACATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAAAGTACTGCTAAAAATAAACACAAATGAGACTATCAGACATCA  600

seq1  ACAAAAATACAATTAGAACTGCACAATCATGCCAACTTTATTCGTGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATACAATTAGAACTGCACAATCATGCCAACTTTATTCGTGTGAA  650

seq1  TTC  653
      |||
seq2  TTC  653