BAC Information

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BAC

Clone NameB6Ng01-054E13
Chromosome1 (Build37)
Map Location 72,024,914 - 72,129,038
singlet/doubletdoublet
Overlap geneEG433319
Upstream geneBard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931
Downstream geneLOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054E13.bB6Ng01-054E13.g
ACCDH877068DH877069
length486978
definitionDH877068|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E13, 5' end.DH877069|Mus musculus domesticus DNA, BAC clone: B6Ng01-054E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,128,547 - 72,129,038)(72,024,914 - 72,025,892)
sequence
aaaggtattaagagggagacaactgattctggtcaagagcacagttcctt
tgggaatcgcagttgcacaggcatgtttaatggagacgtctttcctaaat
caaatgaaatgtccttaattaatgcattgctttattcttcaaacattcgg
caagcttcctaatcttatctgctgaatctttgtagctgttagcacatgct
ttcaaatttttgccaactattttcctcccttttatactctaacataaaat
gtcttttctagatcattaaagaaaaaaaaaaactctccacaaaaaactac
cgtgagtgtgtgtaattttctttgactcatggacaagagatggtgtttat
gcaggagaatacagcaagggctgggaatcttacgaagtggtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtatgtgtgcgcgtgcgagagtgaaggggca
tagatatagctctgcctgtggttctcagtggggtga
gaattcttcatacttcaggtctaagactagagggccaccatcattgagtt
ctggtgagaattactcatggctgtcttcttgttatatgcccacagggtag
aaagagaaggagagaacttcctagtgtccttttgtaagcaactagtcctg
ggactcctgagatggctcagtagttaagaacataggctgctctttcagag
gacctgggttccactccttgcacccatgttcagcactgtaactccagtta
caggggatccagtgtccagcttcttcttctggcctctgaggacaccagac
aaacaaatggatcacagacatgccatacaggcaaaatacaagcatacttt
aaatttaaatttttaaaggagaacactgatcccttttatgaaggttctat
cctcttcacctaattacctcccagagaccccaccacttaatagcatcatt
taggaaataggattatttttcaaagggggatttaaaagaagggatacagt
ttcagattaatatacttaaattcatgaagatggaaaagaataaaatgtag
tcaactgccttgggtcatcagatccaatacaccctcacaccataacagca
cacagagataacccacctggttttgataccaacaaatgactgatgggctg
acattaccatggggggcctacctctttcccagactcaaagcctgaatgca
attcccttgagtggtctcagcctagtcggattctaccgcacaatttggaa
ggtgcctgggctcacatgactttggtttatatttcaagaattcatctgtt
ggttttagtttggcttccaaacacatattcccacagacattgtattatac
attatggttaaatcctcaaaactgcccacagaaggctctttaagttatat
atttgaaatatgtactaaaatagtaccatatcaactttgctaacccagca
cttataagccgagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_72128547_72129038
seq2: B6Ng01-054E13.b_46_537 (reverse)

seq1  TCACCCCACTGAGAACTACAGACGGAGCACAGTCTGTGCCGCTTCAGTCA  50
      |||||||||||||||| |||| | ||||    ||| |||| ||||| || 
seq2  TCACCCCACTGAGAACCACAGGCAGAGCTATATCTATGCCCCTTCACTCT  50

seq1  AGGCTGGACACACACACACACACACACACACACACACACACACACACCAC  100
       |   |  |||||| |||||||||||||||||||||||||||||||||||
seq2  CGCACGCGCACACATACACACACACACACACACACACACACACACACCAC  100

seq1  TTCGTAAGATTCCCAGCCCTTGCTGTATTCTCCTGCATAAACACCATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAAGATTCCCAGCCCTTGCTGTATTCTCCTGCATAAACACCATCTC  150

seq1  TTGTCCATGAGTCAAAGAAAATTACACACACTCACGGTAGTTTTTTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATGAGTCAAAGAAAATTACACACACTCACGGTAGTTTTTTGTGG  200

seq1  AGAGTTTTTTTTTTTCTTTAATGATCTAGAAAAGACATTTTATGTTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTTTTTTTCTTTAATGATCTAGAAAAGACATTTTATGTTAGAG  250

seq1  TATAAAAGGGAGGAAAATAGTTGGCAAAAATTTGAAAGCATGTGCTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGGGAGGAAAATAGTTGGCAAAAATTTGAAAGCATGTGCTAACA  300

seq1  GCTACAAAGATTCAGCAGATAAGATTAGGAAGCTTGCCGAATGTTTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAGATTCAGCAGATAAGATTAGGAAGCTTGCCGAATGTTTGAAG  350

seq1  AATAAAGCAATGCATTAATTAAGGACATTTCATTTGATTTAGGAAAGACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGCAATGCATTAATTAAGGACATTTCATTTGATTTAGGAAAGACG  400

seq1  TCTCCATTAAACATGCCTGTGCAACTGCGATTCCCAAAGGAACTGTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATTAAACATGCCTGTGCAACTGCGATTCCCAAAGGAACTGTGCTC  450

seq1  TTGACCAGAATCAGTTGTCTCCCTCTTAATACCTTTGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGAATCAGTTGTCTCCCTCTTAATACCTTTGAATTC  492

seq1: chr1_72024914_72025892
seq2: B6Ng01-054E13.g_68_1045

seq1  GAATTCTTCATACTTCAGGTCTAAGACTAGAGGGCCACCATCATTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATACTTCAGGTCTAAGACTAGAGGGCCACCATCATTGAGTT  50

seq1  CTGGTGAGAATTACTCATGGCTGTCTTCTTGTTATATGCCCACAGGGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGAATTACTCATGGCTGTCTTCTTGTTATATGCCCACAGGGTAG  100

seq1  AAAGAGAAGGAGAGAACTTCCTAGTGTCCTTTTGTAAGCAACTAGTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAGGAGAGAACTTCCTAGTGTCCTTTTGTAAGCAACTAGTCCTG  150

seq1  GGACTCCTGAGATGGCTCAGTAGTTAAGAACATAGGCTGCTCTTTCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCCTGAGATGGCTCAGTAGTTAAGAACATAGGCTGCTCTTTCAGAG  200

seq1  GACCTGGGTTCCACTCCTTGCACCCATGTTCAGCACTGTAACTCCAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGGTTCCACTCCTTGCACCCATGTTCAGCACTGTAACTCCAGTTA  250

seq1  CAGGGGATCCAGTGTCCAGCTTCTTCTTCTGGCCTCTGAGGACACCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATCCAGTGTCCAGCTTCTTCTTCTGGCCTCTGAGGACACCAGAC  300

seq1  AAACAAATGGATCACAGACATGCCATACAGGCAAAATACAAGCATACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATGGATCACAGACATGCCATACAGGCAAAATACAAGCATACTTT  350

seq1  AAATTTAAATTTTTAAAGGAGAACACTGATCCCTTTTATGAAGGTTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAATTTTTAAAGGAGAACACTGATCCCTTTTATGAAGGTTCTAT  400

seq1  CCTCTTCACCTAATTACCTCCCAGAGACCCCACCACTTAATAGCATCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCACCTAATTACCTCCCAGAGACCCCACCACTTAATAGCATCATT  450

seq1  TAGGAAATAGGATTATTTTTCAAAGGGGGATTTAAAAGAAGGGATACAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAATAGGATTATTTTTCAAAGGGGGATTTAAAAGAAGGGATACAGT  500

seq1  TTCAGATTAATATACTTAAATTCATGAAGATGGAAAAGAATAAAATGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTAATATACTTAAATTCATGAAGATGGAAAAGAATAAAATGTAG  550

seq1  TCAACTGCCTTGGGTCATCAGATCCAATACACCCTCACACCATAACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGCCTTGGGTCATCAGATCCAATACACCCTCACACCATAACAGCA  600

seq1  CACAGAGATAACCCACCTGGTTTTGATACCAACAAATGACTGATGGGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGATAACCCACCTGGTTTTGATACCAACAAATGACTGATGGGCTG  650

seq1  ACATTACCATGGGGGGCCTACCTCTTTCCCAGACTCAAAGCCTGAATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACCATGGGGGGCCTACCTCTTTCCCAGACTCAAAGCCTGAATGCA  700

seq1  ATTCCCTTGAGTGGTCTCAGCCTAGTCGGATTCTACCGCACAATTTGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTGAGTGGTCTCAGCCTAGTCGGATTCTACCGCACAATTTGGAA  750

seq1  GGTGCCTGGGCTCACATGACTTTGGTTTATATTTCAAGAATTCATCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCTGGGCTCACATGACTTTGGTTTATATTTCAAGAATTCATCTGTT  800

seq1  GGTTTTAGTTTGGCTTCCAAACACATATTCCCACAGACATTGTATTATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGTTTGGCTTCCAAACACATATTCCCACAGACATTGTATTATAC  850

seq1  ATTATGGTTAAATCCTCAAAACTGCCCACAGAAGGCTCTTTAAGTTATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTATGGTTAAATCCTCAAAACTGCCCACAGAAGGCTCTTTAAGTTA-TA  899

seq1  TATTTGAAATATGTACTAAAATAGTACCATATCAACTTTGCTAACCCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGAAATATGTACTAAAATAGTACCATATCAACTTTGCTAACCCAGC  949

seq1  ACTTATAAGCCGAGAGAGAGAGAGAGAGA  979
      |||||||||||||||||||||||||||||
seq2  ACTTATAAGCCGAGAGAGAGAGAGAGAGA  978