BAC Information

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BAC

Clone NameB6Ng01-055B22
Chromosome1 (Build37)
Map Location 81,784,935 - 81,917,816
singlet/doubletdoublet
Overlap geneEG665145
Upstream geneLOC665092, 9430031J16Rik, EG621020, LOC433328
Downstream geneIrs1, Rhbdd1, Col4a4, Col4a3, 5230400G24Rik, Tm4sf20, LOC100039491, Hrb, A030005L19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055B22.bB6Ng01-055B22.g
ACCDH877672DH877673
length1,0421,017
definitionDH877672|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B22, 5' end.DH877673|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,916,780 - 81,917,816)(81,784,935 - 81,785,956)
sequence
gaattccaatagctgtcatggcctcttctaactcatatttaaaatcaagt
gaatgaactatgtatttcaatacattttttaaaaattatctttacatata
tgtaaatagttttttctataattattgaattatcattaaattatttttag
agacaaaatactctttagtaaatggagtcagatttattttcctaattttg
gaagaatgtactttactataagattcacaggtactttattgagtatagtg
catttctaaagcctttccccttggggattttatgtaatgttcactctata
aggtaaggggtatttttggggtaatggccttgatggtgttgaggaaaaca
ttgcatttaataccctggagaagggtgggttatttataccttctctctgc
ttttgactgattaggcaagtgttaaaaggtcctaggcttatattataaaa
gtactaagttctcaagttgcctagaataaatgaaattgcaaaagtttctc
caagcaattatttggaaggttttatatttaatcctaggttataattgtaa
gcagacaaaaaaacaaaaaaaacaaaaaaacagggaggggaattgtagga
gtgtaaaaatatgtttagcaaaaattgcattcaaggaagacataactata
tatgcaaatacattattgaaatctttttatgctaagtaataatataacac
attattgtcaatcaaatttatgcaagtaggacagtgttttgatgtctgtt
ggaaagctgatcagtgctataatatttcctttctactccatgaggtatca
tgcatgcagaatttagtttgtgtgtagaacaagctctcttttgaatgaca
tttgcaggggttgtttccagggactaatgacacttgttaatataaaggag
gggaattatgcatagatgaaagcatatattattccttagaactagtgggt
ctgtggtaccaaattcataaaaggtaagccacctaggctaaagcattcag
aagaaaagtaattagacgataacctctctggtccaatgacac
gaattcattaggagatgaagggaaacacagccctacaagtgttctgctgg
gcatttcttttcaaccttataattcatagttttcagatacactgctaaat
taaacttgttcatcaagtgatgataagaatttcaaatatttcacctcatt
tcttctaaggaaaacaaaaacataggtacagggaagggaattggagctct
gaaagggaaactgtagctagtcgagtcaccacattctgcaagtgatatgg
tctatggatcatagcctcaatatacatttatgtctaagatatttcacatc
aacttttctttgccgaaagatattttttaaagtgtaccctgatgagttcc
tctatgagagcattgcccagtgctagaacaaaacaaagccttagaaataa
tgggaatcatataactctcacctcagggcactacatgtttcctctacttt
agtgaggaaattgtgattgatgatgcaatgttgggatactataggacaga
ggttctcattctgtgggtcataattctttgggggaagggggtcacatatc
aaatatttacatttcatgacagtagcaaaattacagttataaggttgcaa
ggaaataattttatggttgggggtcagcatagcatgggaaattgtattaa
agggtcacagcattaggaaagctgaaaaccattgatagggagtcaagaat
caataggaaatagcaaagcagaaggggaaagtccatgatggcttaagcct
acacaaggaaactaaaggcaaaagagggaaactgggaaaaagcagaggtg
gtcctccccagaaaagtgctcaccaattgtttgtgtaatgccaaatagtc
agccctgaaaacatgcatactactaacataatacaggtaaaacgttattt
ttagaaatatgtatgtgtttacaatatgcatgtaatacaagcatgaaata
ataaaagccatggaatttgaaggcaagggttatgggtatatagtaggcct
tggaggaaagaagggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_81916780_81917816
seq2: B6Ng01-055B22.b_45_1086 (reverse)

seq1  GTGTCATTGGAACAAGAGAGGTTATCGTC-AATTATCTATCTTCTGAATG  49
      |||||||||| || ||||||||||||||| |||||  | |||||||||||
seq2  GTGTCATTGG-ACCAGAGAGGTTATCGTCTAATTACTTTTCTTCTGAATG  49

seq1  CTTTAGCCTA-GTGGCTTA-CATCTATGAATTTGGTA-CACAGACCCACT  96
      |||||||||| |||||||| | | ||||||||||||| ||||||||||||
seq2  CTTTAGCCTAGGTGGCTTACCTTTTATGAATTTGGTACCACAGACCCACT  99

seq1  AGTTCTAAGG-ATAATATATGCTTTCATCTATGCATAATTCCCCTCC-TT  144
      |||||||||| |||||||||||||||||||||||||||||||||||| ||
seq2  AGTTCTAAGGAATAATATATGCTTTCATCTATGCATAATTCCCCTCCTTT  149

seq1  ATATTAACAAGTGTCATTAGTCCCTGGAAACAACCCCTGCAAATGTCATT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAACAAGTGTCATTAGTCCCTGGAAACAACCCCTGCAAATGTCATT  199

seq1  CAAAAGAGAGCTTGTTCTACACACAAACTAAATTCTGCATGCATGATACC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAGAGCTTGTTCTACACACAAACTAAATTCTGCATGCATGATACC  249

seq1  TCATGGAGTAGAAAGGAAATATTATAGCACTGATCAGCTTTCCAACAGAC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGAGTAGAAAGGAAATATTATAGCACTGATCAGCTTTCCAACAGAC  299

seq1  ATCAAAACACTGTCCTACTTGCATAAATTTGATTGACAATAATGTGTTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAACACTGTCCTACTTGCATAAATTTGATTGACAATAATGTGTTAT  349

seq1  ATTATTACTTAGCATAAAAAGATTTCAATAATGTATTTGCATATATAGTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTACTTAGCATAAAAAGATTTCAATAATGTATTTGCATATATAGTT  399

seq1  ATGTCTTCCTTGAATGCAATTTTTGCTAAACATATTTTTACACTCCTACA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTCCTTGAATGCAATTTTTGCTAAACATATTTTTACACTCCTACA  449

seq1  ATTCCCCTCCCTGTTTTTTTGTTTTTTTTGTTTTTTTGTCTGCTTACAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCCTCCCTGTTTTTTTGTTTTTTTTGTTTTTTTGTCTGCTTACAAT  499

seq1  TATAACCTAGGATTAAATATAAAACCTTCCAAATAATTGCTTGGAGAAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACCTAGGATTAAATATAAAACCTTCCAAATAATTGCTTGGAGAAAC  549

seq1  TTTTGCAATTTCATTTATTCTAGGCAACTTGAGAACTTAGTACTTTTATA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCAATTTCATTTATTCTAGGCAACTTGAGAACTTAGTACTTTTATA  599

seq1  ATATAAGCCTAGGACCTTTTAACACTTGCCTAATCAGTCAAAAGCAGAGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAGCCTAGGACCTTTTAACACTTGCCTAATCAGTCAAAAGCAGAGA  649

seq1  GAAGGTATAAATAACCCACCCTTCTCCAGGGTATTAAATGCAATGTTTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTATAAATAACCCACCCTTCTCCAGGGTATTAAATGCAATGTTTTC  699

seq1  CTCAACACCATCAAGGCCATTACCCCAAAAATACCCCTTACCTTATAGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACACCATCAAGGCCATTACCCCAAAAATACCCCTTACCTTATAGAG  749

seq1  TGAACATTACATAAAATCCCCAAGGGGAAAGGCTTTAGAAATGCACTATA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATTACATAAAATCCCCAAGGGGAAAGGCTTTAGAAATGCACTATA  799

seq1  CTCAATAAAGTACCTGTGAATCTTATAGTAAAGTACATTCTTCCAAAATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAAAGTACCTGTGAATCTTATAGTAAAGTACATTCTTCCAAAATT  849

seq1  AGGAAAATAAATCTGACTCCATTTACTAAAGAGTATTTTGTCTCTAAAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATAAATCTGACTCCATTTACTAAAGAGTATTTTGTCTCTAAAAA  899

seq1  TAATTTAATGATAATTCAATAATTATAGAAAAAACTATTTACATATATGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAATGATAATTCAATAATTATAGAAAAAACTATTTACATATATGT  949

seq1  AAAGATAATTTTTAAAAAATGTATTGAAATACATAGTTCATTCACTTGAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATTTTTAAAAAATGTATTGAAATACATAGTTCATTCACTTGAT  999

seq1  TTTAAATATGAGTTAGAAGAGGCCATGACAGCTATTGGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATGAGTTAGAAGAGGCCATGACAGCTATTGGAATTC  1042

seq1: chr1_81784935_81785956
seq2: B6Ng01-055B22.g_70_1086

seq1  GAATTCATTAGGAGATGAAGGGAAACACAGCCCTACAAGTGTTCTGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAGGAGATGAAGGGAAACACAGCCCTACAAGTGTTCTGCTGG  50

seq1  GCATTTCTTTTCAACCTTATAATTCATAGTTTTCAGATACACTGCTAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTTTTCAACCTTATAATTCATAGTTTTCAGATACACTGCTAAAT  100

seq1  TAAACTTGTTCATCAAGTGATGATAAGAATTTCAAATATTTCACCTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTGTTCATCAAGTGATGATAAGAATTTCAAATATTTCACCTCATT  150

seq1  TCTTCTAAGGAAAACAAAAACATAGGTACAGGGAAGGGAATTGGAGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAGGAAAACAAAAACATAGGTACAGGGAAGGGAATTGGAGCTCT  200

seq1  GAAAGGGAAACTGTAGCTAGTCGAGTCACCACATTCTGCAAGTGATATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAAACTGTAGCTAGTCGAGTCACCACATTCTGCAAGTGATATGG  250

seq1  TCTATGGATCATAGCCTCAATATACATTTATGTCTAAGATATTTCACATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGATCATAGCCTCAATATACATTTATGTCTAAGATATTTCACATC  300

seq1  AACTTTTCTTTGCCGAAAGATATTTTTTAAAGTGTACCCTGATGAGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTTGCCGAAAGATATTTTTTAAAGTGTACCCTGATGAGTTCC  350

seq1  TCTATGAGAGCATTGCCCAGTGCTAGAACAAAACAAAGCCTTAGAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAGCATTGCCCAGTGCTAGAACAAAACAAAGCCTTAGAAATAA  400

seq1  TGGGAATCATATAACTCTCACCTCAGGGCACTACATGTTTCCTCTACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATCATATAACTCTCACCTCAGGGCACTACATGTTTCCTCTACTTT  450

seq1  AGTGAGGAAATTGTGATTGATGATGCAATGTTGGGATACTATAGGACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGGAAATTGTGATTGATGATGCAATGTTGGGATACTATAGGACAGA  500

seq1  GGTTCTCATTCTGTGGGTCATAATTCTTTGGGGGAAGGGGGTCACATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCATTCTGTGGGTCATAATTCTTTGGGGGAAGGGGGTCACATATC  550

seq1  AAATATTTACATTTCATGACAGTAGCAAAATTACAGTTATAAGGTTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTACATTTCATGACAGTAGCAAAATTACAGTTATAAGGTTGCAA  600

seq1  GGAAATAATTTTATGGTTGGGGGTCAGCATAGCATGGGAAATTGTATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAATTTTATGGTTGGGGGTCAGCATAGCATGGGAAATTGTATTAA  650

seq1  AGGGTCACAGCATTAGGAAAGCTGAAAACCATTGATAGGGAGTCAAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACAGCATTAGGAAAGCTGAAAACCATTGATAGGGAGTCAAGAAT  700

seq1  CAATAGGAAATAGCAAAGCAGAAGGGGAAAAGTCCATGATGGCTTAAGCC  750
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAATAGGAAATAGCAAAGCAGAAGGGG-AAAGTCCATGATGGCTTAAGCC  749

seq1  TACACAAGG-AACTAAAGGCAAAAGAGGGAAACT-GGAAAAAGCAGAGGT  798
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  TACACAAGGAAACTAAAGGCAAAAGAGGGAAACTGGGAAAAAGCAGAGGT  799

seq1  GGTCCTCCCCAGAGAAGTGCTCACCAATTGTTTGTGTAATGCCAAATAGT  848
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCCCCAGAAAAGTGCTCACCAATTGTTTGTGTAATGCCAAATAGT  849

seq1  CAGCCCTGAAAACATGCATACTACTAACATTATACAGGTTAAAACAGTTA  898
      |||||||||||||||||||||||||||||| ||||||| |||||| ||||
seq2  CAGCCCTGAAAACATGCATACTACTAACATAATACAGG-TAAAAC-GTTA  897

seq1  TATTTAGAAATATGTATGTGTATACACATATGCATGTAATAACAAGCAGG  948
      | ||||||||||||||||||| |||| ||||||||||||| ||||||| |
seq2  TTTTTAGAAATATGTATGTGTTTACA-ATATGCATGTAAT-ACAAGCATG  945

seq1  AAAAAAAAAGAGGCCAT-GAATTTGAAGGCAAGGGGTTATGGGTATATAG  997
      ||| || || | ||||| |||||||||||||| |||||||||||||||||
seq2  AAATAATAA-AAGCCATGGAATTTGAAGGCAA-GGGTTATGGGTATATAG  993

seq1  TAGGCCTTGGAGGGAAGAAAGGGAA  1022
      ||||||||||||| ||| |||||||
seq2  TAGGCCTTGGAGGAAAG-AAGGGAA  1017