BAC Information

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BAC

Clone NameB6Ng01-056F10
Chromosome1 (Build37)
Map Location 15,123,247 - 15,123,965
singlet/doubletsinglet
Overlap genenone
Upstream geneEya1, LOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949
Downstream geneLOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056F10.bB6Ng01-056F10.g
ACCDH878526DH878527
length719911
definitionDH878526|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F10, 5' end.DH878527|Mus musculus domesticus DNA, BAC clone: B6Ng01-056F10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacatacaagattggctgaccagattatatgtatctccttcca
attctgtatccagtgatatcacattatctgctcaaaatggccaggcatgg
tgagagtatattttagcatttaaatggtgaatacggaagatctcaggttc
tctctggatttaccaacatatcattagttgaagaggaaagatgattggtt
gggagtggaggggtgaatcagcctgagattattagttccaggtttctatc
catgtcccatgatttactgacaataatagcaataccactaaaacaaaccc
atcatcagtgtctagctgttatgctgaaatgtgccaggtatgcctcctaa
ccagttcatgctatgttcacacttaaatcttacacagaataattctgaga
tagaatttctatgcctgctaaagatcaacagtgggtcactgagagtaagc
agactcttggtgttcttagccaagttctttgtgttcagttcttttctctc
ccttgttttaacttctactcacatgacagtgttttatcttttattctttc
tacaatattctagcttttcttgttcaaaatgtctttgtttttcataggct
aaaataccagaattagaagaaattaaacaggaagagttttttaactgtaa
gctaacacagcgtaatgtgaatggatgactgtgtcccctctaatatccca
catataaaactaagggcta
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgacctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttgtctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgcgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccatctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccacccagaag
ctctgcgactctcgcccgtcccagaaatggctggcactctgtattccaca
cggtcacctgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctttgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaggtggccggctgtctggagctgaagatggcgccgccca
aagctctgcgactctcgcccgtcccaaaaacggctggcactctgtattcc
acaccggtcaccctgtgcagccctgcccttccgcggaagtcctcgaagcc
aagaaggcttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15123247_15123965
seq2: B6Ng01-056F10.b_47_765 (reverse)

seq1  TAGCCCTTAGTTTCTATATGT-GGATATTAGAGGGGACACAGTCATCCAT  49
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  TAGCCCTTAGTTT-TATATGTGGGATATTAGAGGGGACACAGTCATCCAT  49

seq1  TCACATTACGCTGTGTTAGCTTACAGTTTAAAAAACTCTTCCTGTTTAAT  99
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCACATTACGCTGTGTTAGCTTACAG-TTAAAAAACTCTTCCTGTTTAAT  98

seq1  TTCTTCTAATTCTGGTATTTTAGCCTCTGAAAAACAATGACATTTTGAAC  149
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  TTCTTCTAATTCTGGTATTTTAGCCTATGAAAAACAAAGACATTTTGAAC  148

seq1  AAGAAAAGCTAGAATATTGTAG-AAGAATAAAAGATAAAACACTGTCATG  198
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGAAAAGCTAGAATATTGTAGAAAGAATAAAAGATAAAACACTGTCATG  198

seq1  TGAGTAGAAGTTAAAACAAGGGAGAGAAAAGAACTGAACACAAAGAACTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAGAAGTTAAAACAAGGGAGAGAAAAGAACTGAACACAAAGAACTT  248

seq1  GGCTAAGAACACCAAGAGTCTGCTTACTCTCAGTGACCCACTGTTGATCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGAACACCAAGAGTCTGCTTACTCTCAGTGACCCACTGTTGATCT  298

seq1  TTAGCAGGCATAGAAATTCTATCTCAGAATTATTCTGTGTAAGATTTAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGGCATAGAAATTCTATCTCAGAATTATTCTGTGTAAGATTTAAG  348

seq1  TGTGAACATAGCATGAACTGGTTAGGAGGCATACCTGGCACATTTCAGCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATAGCATGAACTGGTTAGGAGGCATACCTGGCACATTTCAGCA  398

seq1  TAACAGCTAGACACTGATGATGGGTTTGTTTTAGTGGTATTGCTATTATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCTAGACACTGATGATGGGTTTGTTTTAGTGGTATTGCTATTATT  448

seq1  GTCAGTAAATCATGGGACATGGATAGAAACCTGGAACTAATAATCTCAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAATCATGGGACATGGATAGAAACCTGGAACTAATAATCTCAGG  498

seq1  CTGATTCACCCCTCCACTCCCAACCAATCATCTTTCCTCTTCAACTAATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTCACCCCTCCACTCCCAACCAATCATCTTTCCTCTTCAACTAATG  548

seq1  ATATGTTGGTAAATCCAGAGAGAACCTGAGATCTTCCGTATTCACCATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTGGTAAATCCAGAGAGAACCTGAGATCTTCCGTATTCACCATTT  598

seq1  AAATGCTAAAATATACTCTCACCATGCCTGGCCATTTTGAGCAGATAATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAAAATATACTCTCACCATGCCTGGCCATTTTGAGCAGATAATG  648

seq1  TGATATCACTGGATACAGAATTGGAAGGAGATACATATAATCTGGTCAGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCACTGGATACAGAATTGGAAGGAGATACATATAATCTGGTCAGC  698

seq1  CAATCTTGTATGTGTGAATTC  719
      |||||||||||||||||||||
seq2  CAATCTTGTATGTGTGAATTC  719