BAC Information

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BAC

Clone NameB6Ng01-057B05
Chromosome1 (Build37)
Map Location 11,192,314 - 11,312,288
singlet/doubletdoublet
Overlap geneC030045D06Rik
Upstream geneArfgef1, Cpa6, LOC433271
Downstream geneA830018L16Rik, LOC665262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057B05.bB6Ng01-057B05.g
ACCDH879051DH879052
length1,1011,113
definitionDH879051|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B05, 5' end.DH879052|Mus musculus domesticus DNA, BAC clone: B6Ng01-057B05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,311,175 - 11,312,288)(11,192,314 - 11,193,440)
sequence
gaattcaagccagataaatatgctatagtaagaatgagtgcccatgtgtt
caaagatgagctgtctgcccatgttgtgtggggagttagtgaaaactttc
agaggtggagccaaatgagggaacttacagcactgttgacacgtcctgga
aaggatgtgaggaccattctgtctctttgtttttgctttctgaccaccat
gacttgagcagacattgtatactacacgctgttactgtggtataatgcca
tgacagtaccaaaaaaaaaaaaaaaaaaaaagcaagggccattcaacgat
caactgacagttctggaactgtgagcctaactattcctttcctattgtaa
gtgtcttatctcaatgtcttgtctcagtgatgggaactggactatacatc
tgttgcttcccactgtgatgctgctgacactccttcagtgggatgtcact
cctctgtgcacagtctagttgggtcctttgaagatttctcagtgggtcac
tgtaaatctgctgactttaagacagaagtcatctacagggaagagatcat
tttctgacctcagacaaaaactgtctattataacataacagagtctcttt
caagaggcaaatgtcttcccatccaagttacagagagaagtaagtaacac
caagccctttcttgtagttatccatcaccttctgtatctgtccaggccta
catgtgagcctttgtcatctctatgtctctccttctaatcccacatgtcc
agttctcctcagtccccaatcattattttcccattccattctggttcatt
ctccctcaaatgttcacacccttcatctcattttcacaagactgctgctc
tgactcacccacttcttcacacaacttcattctgcaagcaggtatttaca
ttcttcatactttccaccaagcatatgactattcttccccaggaacatta
aataagactgtgtctagtcttgcatggtctctattactgaggtttacttc
ctattgatccagctggagaaatcctcagttctgaaaaattccccctggct
taaagatttgacaactcaaatatcctccatcactctgatgacttaggccc
c
gaattccatactctgtgagttatctcaatggaactgtgctttttaaaaac
ctttacacttatttcaaccagatattttcaatcagagtttacttggaaaa
aattcaaccagacctttgtattaagaacataaagctctgaaaatgtacat
gccaataactttgtacagactaaaaagtttatatttaggaatatatgtat
gtacatgcatatgcacatatgtggaaaaaagagattagtaatttggagga
gttttagtaattggaaagttttgaatgaggaaaggtaagggagaaacgct
gtaattaaattataacctaaataaacatgcatacgtacaaacttaccata
catacatatatacatacatacattcatacatacatgaaaactcaagctca
gctgtaacaatggctctctggtacaggcttccctggagctctaggcacag
tcagttcttactcagttctgtcacatgcatagaaatagtatgactcacac
tgcagtgttcagagatgcccagaacatttctcctcactctgttacttgac
attagaaaaatgatggggtttttcagccctgccataagcctccaggtaca
aggtaacctttctagtacttcaaaaagagtttggagccttgggagatgtt
caatggataagagctcttgttgcagatgcacatgcgtgaagacctgagtt
tgaatcctcagcaaccactttacacacacacacacacacacacacacaca
cacacacacacaaaactggtcatgctgccttgcatgcctttactactttt
gtagtgggggaatagaggatggtccctagagcttgctaatttggctaatt
agcaccagattcaataagagactgtctaaaagatgaaaagacatagagtg
gggcacctggcaacccgtctaacctccatagctgtaccactcacacactc
ctctgcactctcaagaaactaatccttcagggctcacttctattctattt
agcagcagattaatgcattccttccgaggccctagggtcattaagaagat
acaataaactacaaaagaaattttctcttaaaaagcactgtttctaaaaa
cagaatacctttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11311175_11312288
seq2: B6Ng01-057B05.b_45_1145 (reverse)

seq1  GGGGCCTAAGTCATCAAGGATGATGGTAGGGATTGATGTAGTGTCAAATC  50
      ||||||||||||||| ||  ||||||   ||||   ||   |||||||||
seq2  GGGGCCTAAGTCATC-AGAGTGATGG--AGGATATTTGAGTTGTCAAATC  47

seq1  TTTAAGCCATGTGTGAATATTTTCAGAAACTGAAGATTTCTCCAGCTGGG  100
      ||||||||| | | |||| ||||||| |||||| ||||||||||||| ||
seq2  TTTAAGCCA-GGGGGAAT-TTTTCAG-AACTGAGGATTTCTCCAGCT-GG  93

seq1  ATCAAATAGGAAGTAAACCTCAGTAATAGAGACCATGCAAGGACTAGACA  150
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATC-AATAGGAAGTAAACCTCAGTAATAGAGACCATGCAA-GACTAGACA  141

seq1  CAGTCTTATTTTAATGTTCCCTGGGGGAAGAATAGTCATATGCTTGGTGG  200
      |||||||| |||||||||||   |||||||||||||||||||||||||||
seq2  CAGTCTTA-TTTAATGTTCC--TGGGGAAGAATAGTCATATGCTTGGTGG  188

seq1  AAAGTATGAAGAATGTAAATACCTGCTTGCAGAATGAAGTTGTGTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAGTATGAAGAATGTAAATACCTGCTTGCAGAATGAAGTTGTGT-GAAG  237

seq1  AAGTGGGTGAGTCAGAGCAGCAGTCTTGTGAAAATGAGATGAAGGGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGTGAGTCAGAGCAGCAGTCTTGTGAAAATGAGATGAAGGGTGTG  287

seq1  AACATTTGAGGGAGAATGAACCAGAATGGAATGGGAAAATAATGATTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGAGGGAGAATGAACCAGAATGGAATGGGAAAATAATGATTGGG  337

seq1  GACTGAGGAGAACTGGACATGTGGGATTAGAAGGAGAGACATAGAGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGGAGAACTGGACATGTGGGATTAGAAGGAGAGACATAGAGATGA  387

seq1  CAAAGGCTCACATGTAGGCCTGGACAGATACAGAAGGTGATGGATAACTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTCACATGTAGGCCTGGACAGATACAGAAGGTGATGGATAACTA  437

seq1  CAAGAAAGGGCTTGGTGTTACTTACTTCTCTCTGTAACTTGGATGGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAGGGCTTGGTGTTACTTACTTCTCTCTGTAACTTGGATGGGAAG  487

seq1  ACATTTGCCTCTTGAAAGAGACTCTGTTATGTTATAATAGACAGTTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGCCTCTTGAAAGAGACTCTGTTATGTTATAATAGACAGTTTTTG  537

seq1  TCTGAGGTCAGAAAATGATCTCTTCCCTGTAGATGACTTCTGTCTTAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTCAGAAAATGATCTCTTCCCTGTAGATGACTTCTGTCTTAAAG  587

seq1  TCAGCAGATTTACAGTGACCCACTGAGAAATCTTCAAAGGACCCAACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGATTTACAGTGACCCACTGAGAAATCTTCAAAGGACCCAACTAG  637

seq1  ACTGTGCACAGAGGAGTGACATCCCACTGAAGGAGTGTCAGCAGCATCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCACAGAGGAGTGACATCCCACTGAAGGAGTGTCAGCAGCATCAC  687

seq1  AGTGGGAAGCAACAGATGTATAGTCCAGTTCCCATCACTGAGACAAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGCAACAGATGTATAGTCCAGTTCCCATCACTGAGACAAGACA  737

seq1  TTGAGATAAGACACTTACAATAGGAAAGGAATAGTTAGGCTCACAGTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATAAGACACTTACAATAGGAAAGGAATAGTTAGGCTCACAGTTCC  787

seq1  AGAACTGTCAGTTGATCGTTGAATGGCCCTTGCTTTTTTTTTTTTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGTCAGTTGATCGTTGAATGGCCCTTGCTTTTTTTTTTTTTTTTT  837

seq1  TTTTGGTACTGTCATGGCATTATACCACAGTAACAGCGTGTAGTATACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTACTGTCATGGCATTATACCACAGTAACAGCGTGTAGTATACAA  887

seq1  TGTCTGCTCAAGTCATGGTGGTCAGAAAGCAAAAACAAAGAGACAGAATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCTCAAGTCATGGTGGTCAGAAAGCAAAAACAAAGAGACAGAATG  937

seq1  GTCCTCACATCCTTTCCAGGACGTGTCAACAGTGCTGTAAGTTCCCTCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACATCCTTTCCAGGACGTGTCAACAGTGCTGTAAGTTCCCTCAT  987

seq1  TTGGCTCCACCTCTGAAAGTTTTCACTAACTCCCCACACAACATGGGCAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTCCACCTCTGAAAGTTTTCACTAACTCCCCACACAACATGGGCAG  1037

seq1  ACAGCTCATCTTTGAACACATGGGCACTCATTCTTACTATAGCATATTTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCATCTTTGAACACATGGGCACTCATTCTTACTATAGCATATTTA  1087

seq1  TCTGGCTTGAATTC  1114
      ||||||||||||||
seq2  TCTGGCTTGAATTC  1101

seq1: chr1_11192314_11193440
seq2: B6Ng01-057B05.g_68_1180

seq1  GAATTCCATACTCTGTGAGTTATCTCAATGGAACTGTGCTTTTTAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACTCTGTGAGTTATCTCAATGGAACTGTGCTTTTTAAAAAC  50

seq1  CTTTACACTTATTTCAACCAGATATTTTCAATCAGAGTTTACTTGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACACTTATTTCAACCAGATATTTTCAATCAGAGTTTACTTGGAAAA  100

seq1  AATTCAACCAGACCTTTGTATTAAGAACATAAAGCTCTGAAAATGTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAACCAGACCTTTGTATTAAGAACATAAAGCTCTGAAAATGTACAT  150

seq1  GCCAATAACTTTGTACAGACTAAAAAGTTTATATTTAGGAATATATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAATAACTTTGTACAGACTAAAAAGTTTATATTTAGGAATATATGTAT  200

seq1  GTACATGCATATGCACATATGTGGAAAAAAGAGATTAGTAATTTGGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGCATATGCACATATGTGGAAAAAAGAGATTAGTAATTTGGAGGA  250

seq1  GTTTTAGTAATTGGAAAGTTTTGAATGAGGAAAGGTAAGGGAGAAACGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGTAATTGGAAAGTTTTGAATGAGGAAAGGTAAGGGAGAAACGCT  300

seq1  GTAATTAAATTATAACCTAAATAAACATGCATACGTACAAACTTACCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAAATTATAACCTAAATAAACATGCATACGTACAAACTTACCATA  350

seq1  CATACATATATACATACATACATTCATACATACATGAAAACTCAAGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATATACATACATACATTCATACATACATGAAAACTCAAGCTCA  400

seq1  GCTGTAACAATGGCTCTCTGGTACAGGCTTCCCTGGAGCTCTAGGCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAACAATGGCTCTCTGGTACAGGCTTCCCTGGAGCTCTAGGCACAG  450

seq1  TCAGTTCTTACTCAGTTCTGTCACATGCATAGAAATAGTATGACTCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTCTTACTCAGTTCTGTCACATGCATAGAAATAGTATGACTCACAC  500

seq1  TGCAGTGTTCAGAGATGCCCAGAACATTTCTCCTCACTCTGTTACTTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGTTCAGAGATGCCCAGAACATTTCTCCTCACTCTGTTACTTGAC  550

seq1  ATTAGAAAAATGATGGGGTTTTTCAGCCCTGCCATAAGCCTCCAGGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAAAATGATGGGGTTTTTCAGCCCTGCCATAAGCCTCCAGGTACA  600

seq1  AGGTAACCTTTCTAGTACTTCAAAAAGAGTTTGGAGCCTTGGGAGATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACCTTTCTAGTACTTCAAAAAGAGTTTGGAGCCTTGGGAGATGTT  650

seq1  CAATGGATAAGAGCTCTTGTTGCAGATGCACATGCGTGAAGACCTGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATAAGAGCTCTTGTTGCAGATGCACATGCGTGAAGACCTGAGTT  700

seq1  TGAATCCTCAGCAACCACTTTACACACACACACACACACACACACACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCTCAGCAACCACTTTACACACACACACACACACACACACACACA  750

seq1  CACACACACACAAAACTGGTCATGCTGCCTTGCATGCCTTTAACTACTTT  800
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACACACACACAAAACTGGTCATGCTGCCTTGCATGCCTTT-ACTACTTT  799

seq1  TGTAGTGGGGGAATAGAAGGATGGTCCCTAGAGCTTGCTAA-TTGGCTAA  849
      |||||||||||||||| |||||||||||||||||||||||| ||||||||
seq2  TGTAGTGGGGGAATAG-AGGATGGTCCCTAGAGCTTGCTAATTTGGCTAA  848

seq1  TTAGCACCAGATTCAATAAGAGACTGTCTAAAAGATGAAAAGACATAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACCAGATTCAATAAGAGACTGTCTAAAAGATGAAAAGACATAGAG  898

seq1  TGGGCCACCTGGCAACCCGTCTAACCTCCATAGCTGTACCCACTCACACA  949
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGGGCACCTGGCAACCCGTCTAACCTCCATAGCTGTA-CCACTCACACA  947

seq1  CTCCTCTGCATCTCTCAGAGACACT-ATCCTTCAGGGGCTCACTTCTATT  998
      |||||||||| |||||| ||| ||| |||||||| |||||||||||||||
seq2  CTCCTCTGCA-CTCTCA-AGAAACTAATCCTTCA-GGGCTCACTTCTATT  994

seq1  CTATTGTAGCAGCAG-TTAATGCATTCTCTACGGAGTCCTTAGGTTCATT  1047
      ||||| ||||||||| ||||||||||| || | ||| || |||| |||||
seq2  CTATT-TAGCAGCAGATTAATGCATTC-CTTCCGAGGCCCTAGGGTCATT  1042

seq1  ATGATGATACAATTAATCTTACACATAGAATTTTTCTCTTAATATAGCAC  1097
      | || |||||||| ||   |||| | |||| ||||||||||| | |||||
seq2  AAGAAGATACAATAAA--CTACA-AAAGAAATTTTCTCTTAA-AAAGCAC  1088

seq1  TTGTTTTCTAAATAACATGAATTACCTTTC  1127
      |   |||||||| |||| ||| ||||||||
seq2  T--GTTTCTAAA-AACA-GAA-TACCTTTC  1113