BAC Information

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BAC

Clone NameB6Ng01-058P23
Chromosome1 (Build37)
Map Location 167,425,581 - 167,595,264
singlet/doubletdoublet
Overlap geneSacy, Mpzl1, Rcsd1
Upstream geneDpt, Xcl1, 1700029M03Rik, Tbx19, Sft2d2, Tiprl, Gpr161, Iqwd1, Brp44, Ppia-ps1-1625
Downstream geneCreg1, Cd247, Pou2f1, LOC665409, Dusp27, Gpa33, Mael, LOC100039795, Tada1l, Pogk, LOC100040287, EG226601, EG226604, 4831428F09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058P23.bB6Ng01-058P23.g
ACCDH880422DH880423
length2281,164
definitionDH880422|Mus musculus domesticus DNA, BAC clone: B6Ng01-058P23, 5' end.DH880423|Mus musculus domesticus DNA, BAC clone: B6Ng01-058P23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(167,595,037 - 167,595,264)(167,425,581 - 167,426,760)
sequence
ctgtcaggaccacaaaacaggtgcctctcatgacaccccaggtgaccttg
ctgatcaccatttatgtctcctttgtttgccaggaaagaccctcagagac
caactccaatgttgacagctcagcgcagccttcagtggcccagctggctg
ggcgctttcgggagcatgcagctgtggccagggaggtgagtctggatgct
tcgggcatcctcttgggggggggggagt
gaattcaccagagaactcagacaggagagaaacattacaagtgaagtgaa
cggtacaaaccctttaccaagaaaggccatcttagaactcatcaggaatg
catatgcaagagaaaccttgtaaacgtagtgaatgcagaaatccttgagt
gttgtctcatctcttagaatttatcagagtatatacgacaggggatcctt
ttaaaaaatgtcacatataaggacaatacctgcatctcagttctaagaat
acatttggaaattcatagtgggaagacaagttttcacaggatataatgtg
gcatgtgctttctctaagtcctactcaggtctgttgttgcaatacttaag
gctccacactagagagttattacggacatgagtaacttgtgaaagtgttt
aagtaatgttcaaatcttagaaaaatttcaagcatttatgctgagaaaaa
ctgaaaatgtgtcaaggtaggaaactattcatcaaaactgttagttgtag
aaactttcaatcccaatacagggtttctactctgcctttgaccatttagt
tactggaaaaaaagacacacacgcaacctttatatttataataaacctta
aatagcacaagagctggtcatatatcaaccctctatgctattagaaccta
ctttccaatcaataacctcgagttattacttactatgcttcatctcggct
gttcttaactccagttggccaaccctcagggccatgttctcttgaactca
cctagcccatggcagcttctcctctattcaccttctctcgtcctagttct
acaaccccaagccagggaaccctaaaccccacctatgtctcttctgccca
actattggctgtcagcatcttcatttaccaatcagaaataacacgagggc
aagccacagtgtcacttgggtctacatagagattctcttgtcttctggga
caccagatctggagactcaatatgagcattaaaatacagcagcatcagcc
aacccacatcctgttcaccctcaaatacttgatactggaagaaaacagag
gagtctagaagaattttttgttatgtaccgttccgccaaaaaactgactg
ataattccgagggagctgataagatggaaatgtcttcagatcctgaactg
acaggattctgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_167595037_167595264
seq2: B6Ng01-058P23.b_53_280 (reverse)

seq1  ACTCCCCCCCCCCCAAGAGGATGCCCGAAGCATCCAGACTCACCTCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCCCCCCCAAGAGGATGCCCGAAGCATCCAGACTCACCTCCCTG  50

seq1  GCCACAGCTGCATGCTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGCTGCATGCTCCCGAAAGCGCCCAGCCAGCTGGGCCACTGAAGG  100

seq1  CTGCGCTGAGCTGTCAACATTGGAGTTGGTCTCTGAGGGTCTTTCCTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGCTGAGCTGTCAACATTGGAGTTGGTCTCTGAGGGTCTTTCCTGGC  150

seq1  AAACAAAGGAGACATAAATGGTGATCAGCAAGGTCACCTGGGGTGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGGAGACATAAATGGTGATCAGCAAGGTCACCTGGGGTGTCATG  200

seq1  AGAGGCACCTGTTTTGTGGTCCTGACAG  228
      ||||||||||||||||||||||||||||
seq2  AGAGGCACCTGTTTTGTGGTCCTGACAG  228

seq1: chr1_167425581_167426760
seq2: B6Ng01-058P23.g_68_1231

seq1  GAATTCACCAGAGAACTCAGACAGGAGAGAAACATTACAAGTGAAGTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGAGAACTCAGACAGGAGAGAAACATTACAAGTGAAGTGAA  50

seq1  CGGTACAAACCCTTTACCAAGAAAGGCCATCTTAGAACTCATCAGGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTACAAACCCTTTACCAAGAAAGGCCATCTTAGAACTCATCAGGAATG  100

seq1  CATATGCAAGAGAAACCTTGTAAACGTAGTGAATGCAGAAATCCTTGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCAAGAGAAACCTTGTAAACGTAGTGAATGCAGAAATCCTTGAGT  150

seq1  GTTGTCTCATCTCTTAGAATTTATCAGAGTATATACGACAGGGGATCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTCATCTCTTAGAATTTATCAGAGTATATACGACAGGGGATCCTT  200

seq1  TTAAAAAATGTCACATATAAGGACAATACCTGCATCTCAGTTCTAAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATGTCACATATAAGGACAATACCTGCATCTCAGTTCTAAGAAT  250

seq1  ACATTTGGAAATTCATAGTGGGAAGACAAGTTTTCACAGGATATAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGGAAATTCATAGTGGGAAGACAAGTTTTCACAGGATATAATGTG  300

seq1  GCATGTGCTTTCTCTAAGTCCTACTCAGGTCTGTTGTTGCAATACTTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGCTTTCTCTAAGTCCTACTCAGGTCTGTTGTTGCAATACTTAAG  350

seq1  GCTCCACACTAGAGAGTTATTACGGACATGAGTAACTTGTGAAAGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACACTAGAGAGTTATTACGGACATGAGTAACTTGTGAAAGTGTTT  400

seq1  AAGTAATGTTCAAATCTTAGAAAAATTTCAAGCATTTATGCTGAGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATGTTCAAATCTTAGAAAAATTTCAAGCATTTATGCTGAGAAAAA  450

seq1  CTGAAAATGTGTCAAGGTAGGAAACTATTCATCAAAACTGTTAGTTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATGTGTCAAGGTAGGAAACTATTCATCAAAACTGTTAGTTGTAG  500

seq1  AAACTTTCAATCCCAATACAGGGTTTCTACTCTGCCTTTGACCATTTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCAATCCCAATACAGGGTTTCTACTCTGCCTTTGACCATTTAGT  550

seq1  TACTGGAAAAAAAGACACACACGCAACCTTTATATTTATAATAAACCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGAAAAAAAGACACACACGCAACCTTTATATTTATAATAAACCTTA  600

seq1  AATAGCACAAGAGCTGGTCATATATCAACCCTCTATGCTATTAGAACCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACAAGAGCTGGTCATATATCAACCCTCTATGCTATTAGAACCTA  650

seq1  CTTTCCAATCAATAACCTCGAGTTATTACTTACTATGCTTCATCTCGGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAATCAATAACCTCGAGTTATTACTTACTATGCTTCATCTCGGCT  700

seq1  GTTCTTAACTCCAGTTGGCCAACCCTCAGGGCCATGTTCTCTTGAACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAACTCCAGTTGGCCAACCCTCAGGGCCATGTTCTCTTGAACTCA  750

seq1  CCTAGCCCATGGCAGCTTCTCCTCTATTCACCTTCTCTCGTCCTAGTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCCATGGCAGCTTCTCCTCTATTCACCTTCTCTCGTCCTAGTTCT  800

seq1  ACAACCCCAAGCCAGGGAACCCTAAACCCCACCTATGTCTCTTCTGCCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCCAAGCCAGGGAACCCTAAACCCCACCTATGTCTCTTCTGCCCA  850

seq1  ACTATTGGCTGTCAGCATCTTCATTTACCAATCAGAAATAACACGAGGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGGCTGTCAGCATCTTCATTTACCAATCAGAAATAACACGAGGGC  900

seq1  AAGGCCACAGTGTCACTTGGGTCTACATAGAGATTCTCTTGTC-TCTGGG  949
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AA-GCCACAGTGTCACTTGGGTCTACATAGAGATTCTCTTGTCTTCTGGG  949

seq1  ACAACCAGATCTTGGAGGACTCAATATGAGCATTAAAATACAAGCAGCAT  999
      || |||||||| |||| |||||||||||||||||||||||| ||||||||
seq2  AC-ACCAGATC-TGGA-GACTCAATATGAGCATTAAAATAC-AGCAGCAT  995

seq1  CAGGCCAACCCACCATCCTGTTCACCCTCAAATACTTGATACTGAAAGAA  1049
      || ||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CA-GCCAACCCA-CATCCTGTTCACCCTCAAATACTTGATACTGGAAGAA  1043

seq1  AACAGAGGAGCCAAG-AGAATATGTTGTTATGTAACAGTTTCCAGCAGAA  1098
      |||||||||| | || ||||| | |||||||||| |   ||||  || ||
seq2  AACAGAGGAGTCTAGAAGAATTTTTTGTTATGTACC--GTTCCGCCAAAA  1091

seq1  GACTGGACTGATAAATTCCGAAGGGAAGCTGATAAGGATGGAAATTGCTT  1148
       ||| ||||||| ||||||||  || ||||||||| |||||||||  |||
seq2  AACT-GACTGAT-AATTCCGA--GGGAGCTGATAA-GATGGAAATGTCTT  1136

seq1  CAAGAATCCCTGAAACTGACAGGATTCTGTAT  1180
      | |||   |||| |||||||||||||||||||
seq2  C-AGA--TCCTG-AACTGACAGGATTCTGTAT  1164