BAC Information

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BAC

Clone NameB6Ng01-060A22
Chromosome1 (Build37)
Map Location 31,476,291 - 31,477,426
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624138, LOC100040699, Phf3, EG638995, Ptp4a1, EG435615, LOC669402, EG435616, 4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262
Downstream geneLOC624275, LOC666056, LOC100041238, Khdrbs2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060A22.bB6Ng01-060A22.g
ACCDH881151DH881152
length1,2761,149
definitionDH881151|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A22, 5' end.DH881152|Mus musculus domesticus DNA, BAC clone: B6Ng01-060A22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaatcccagcaaccacatggtgcttcacaaccatccttaatgag
aacttatgccttcttctggtgtgtctgaagacagctacagtgtacttatg
tataataataaataaatctttaaaaaaataaaaagacagggttaaaacat
aggaagacagtattgagtcagggaaggagccagggtggaagcccatatac
aggaggaagctgtgtttgaattccttctggtttccatttctagaaaacat
ctcagatagttcagatttcttgtagaagcagcactctctgcagaggagag
cacacatcttgtactataggagttgaggctgatctgagctttctcaaata
tatatatatatatgctattgaggcagagaggttaaatgattcctagaagg
cttcagtccgcttgctttagttatagtccgtacctccccccacccaatgc
tctcaaatgtccagagtggcaagatgacagatgagttgcatgactatggc
cctttagaaggcacttgaattgcttttgggggttagagggtgtcagtctc
atgataactgcttcaaacctgacagaaaggtgatgagggagcagcattta
agagtacctcagaaaaggatccagtcaaagtgccgtgataaagtttaaca
gttggcaaagatccagaacataagtcaggaggttataactacctcctgac
ttatgtgggggatattaaaagacaaaggactgtgtggaccacaatgcatg
gttaagtataaggttaacataaggttaaatgtacttgtatacctggctgg
gtcatgtaccagagtactattgaaggataaggtaactgtactagctgttt
atttacatcagactccaagatcatacagaagtatattttatattgtcagg
ctatgtaaagagacaatttaatttctaagttgaattcgcccaaagaaatg
atttccaaattttcaattaaaaattatattctcaagacagtggctgcatt
gtctgtagtaaatgattcattttacaaagcttttttttttgttgttttca
acaacacaaacccttatgaacagaaggttaccaatatttgtacatttcat
tcgaatactcaactgacgatgaaaacatcagcatgttcaatctgtaataa
taatttatatgtaacagaactgatttaacaaagctgagcaattgttgtct
ttcaatgcaattcgagtccttgatcttccacttcgtcgctcgatctgtgt
gcgctgtactgtcctgcactgatact
gaattcaattcaattcaatctagtttagttcagatcagatcagatcagtt
cctttcagatgaagactgttgtgctcagttcaatttgaggcagagcagtt
gaattaagttcagttcacttggtggtgttcagaagcactctttccaagca
gagcaatacagtcagaaactgaaagaagccaatttgaatcagtcaccttg
aagaggaggttgagccagaacagctgagttgaaccaggcagcaagaattc
agaaagatctagaaagggtgagtttattcagcagtaagtctgagaggctg
caacattctaggccttcattagcagagaggttggaagctgaaacctgcaa
ggtccaggctagagaagattagattgtacagtggctataaccttccaggc
ctaggagtaattagaaacactgtgggttctgcccaagccatgtattcata
aagtttgggtattgctctcatctcatctattcatttgaggccataaaagc
gacatttacatttacagagagatctccttcaaacacagtcatggccactg
tgttccttgagaacttgctgctttccaataaatggtgatcatctaagaca
agtatttcttgtggtttattttatatctttacctttaagaaatgttttaa
taaaatagatgattagaattcactaagtaatttgatgaacaacaaagttc
atttctacttgattcatgcaggctaccagtctgatttcatagaaaatgta
tactaaaaataattatgctgtgtatctaaaactcgagttataaaaaaact
cacactaagaaattatcaaagtaggactatggtacaaaatttgacttcat
aaatgattcatggcatacatacttaatatgccatagccatgccagtactc
ttctttctatatcaaatgtaggcatcactaattaatccaggaaaacatct
ttgctcagcctacatgtgcactcgtaaatgttctcatcccacagcacacc
ctgtgatagcagtgcttacgatgctgaggtacagtgagttccatggagtt
caagtttagcctgagttattgcacaatgttgttccctgtctttccctacc
catcctagaagagatgaggcgaaaagcaaattagtggagcgagcagcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_31476291_31477426
seq2: B6Ng01-060A22.g_78_1215 (reverse)

seq1  TTGCTTGCTCGCT-CACTAATTTGCTCTCTGCCTCATCTC-TCTAGGATG  48
      |||| |||||||| |||||||||||| |  |||||||||| |||||||||
seq2  TTGC-TGCTCGCTCCACTAATTTGCTTTTCGCCTCATCTCTTCTAGGATG  49

seq1  GGTAGGGAGACA-AGGGAAC-ACATTGTGGCAATAACTCAGGCTAAACTT  96
      |||||||| | | ||||||| ||||||| |||||||||||||||||||||
seq2  GGTAGGGAAAGACAGGGAACAACATTGT-GCAATAACTCAGGCTAAACTT  98

seq1  GAACT-CATGGAACTCACTGTACCTCAGCATCGTAAGCACTGCTATCACA  145
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCATGGAACTCACTGTACCTCAGCATCGTAAGCACTGCTATCACA  148

seq1  GGGTGTGCTGTGGGATGAGAACATTTACGAGTGCACATGTAGGCTGAGCA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGCTGTGGGATGAGAACATTTACGAGTGCACATGTAGGCTGAGCA  198

seq1  AAGATGTTTTCCTGGATTAATTAGTGATGCCTACATTTGATATAGGAAAG  245
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGATGTTTTCCTGGATTAATTAGTGATGCCTACATTTGATATA-GAAAG  247

seq1  AAGAGTACTGGCATGGCTATGGCATATTAAGTATGTATGCCATGAATCAT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTACTGGCATGGCTATGGCATATTAAGTATGTATGCCATGAATCAT  297

seq1  TTATGAAGTCAAATTTTGTACCATAGTCCTACTTTGATAATTTCTTAGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGTCAAATTTTGTACCATAGTCCTACTTTGATAATTTCTTAGTG  347

seq1  TGAGTTTTTTTATAACTCGAGTTTTAGATACACAGCATAATTATTTTTAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTTTATAACTCGAGTTTTAGATACACAGCATAATTATTTTTAG  397

seq1  TATACATTTTCTATGAAATCAGACTGGTAGCCTGCATGAATCAAGTAGAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTTCTATGAAATCAGACTGGTAGCCTGCATGAATCAAGTAGAA  447

seq1  ATGAACTTTGTTGTTCATCAAATTACTTAGTGAATTCTAATCATCTATTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTTGTTGTTCATCAAATTACTTAGTGAATTCTAATCATCTATTT  497

seq1  TATTAAAACATTTCTTAAAGGTAAAGATATAAAATAAACCACAAGAAATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAACATTTCTTAAAGGTAAAGATATAAAATAAACCACAAGAAATA  547

seq1  CTTGTCTTAGATGATCACCATTTATTGGAAAGCAGCAAGTTCTCAAGGAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTTAGATGATCACCATTTATTGGAAAGCAGCAAGTTCTCAAGGAA  597

seq1  CACAGTGGCCATGACTGTGTTTGAAGGAGATCTCTCTGTAAATGTAAATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGGCCATGACTGTGTTTGAAGGAGATCTCTCTGTAAATGTAAATG  647

seq1  TCGCTTTTATGGCCTCAAATGAATAGATGAGATGAGAGCAATACCCAAAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTTTTATGGCCTCAAATGAATAGATGAGATGAGAGCAATACCCAAAC  697

seq1  TTTATGAATACATGGCTTGGGCAGAACCCACAGTGTTTCTAATTACTCCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAATACATGGCTTGGGCAGAACCCACAGTGTTTCTAATTACTCCT  747

seq1  AGGCCTGGAAGGTTATAGCCACTGTACAATCTAATCTTCTCTAGCCTGGA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGAAGGTTATAGCCACTGTACAATCTAATCTTCTCTAGCCTGGA  797

seq1  CCTTGCAGGTTTCAGCTTCCAACCTCTCTGCTAATGAAGGCCTAGAATGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGGTTTCAGCTTCCAACCTCTCTGCTAATGAAGGCCTAGAATGT  847

seq1  TGCAGCCTCTCAGACTTACTGCTGAATAAACTCACCCTTTCTAGATCTTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCTCTCAGACTTACTGCTGAATAAACTCACCCTTTCTAGATCTTT  897

seq1  CTGAATTCTTGCTGCCTGGTTCAACTCAGCTGTTCTGGCTCAACCTCCTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTCTTGCTGCCTGGTTCAACTCAGCTGTTCTGGCTCAACCTCCTC  947

seq1  TTCAAGGTGACTGATTCAAATTGGCTTCTTTCAGTTTCTGACTGTATTGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGTGACTGATTCAAATTGGCTTCTTTCAGTTTCTGACTGTATTGC  997

seq1  TCTGCTTGGAAAGAGTGCTTCTGAACACCACCAAGTGAACTGAACTTAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTGGAAAGAGTGCTTCTGAACACCACCAAGTGAACTGAACTTAAT  1047

seq1  TCAACTGCTCTGCCTCAAATTGAACTGAGCACAACAGTCTTCATCTGAAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGCTCTGCCTCAAATTGAACTGAGCACAACAGTCTTCATCTGAAA  1097

seq1  GGAACTGATCTGATCTGATCTGAACTAAACTAGATTGAATT  1136
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGATCTGATCTGATCTGAACTAAACTAGATTGAATT  1138