BAC Information

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BAC

Clone NameB6Ng01-060O23
Chromosome1 (Build37)
Map Location 80,294,997 - 80,464,357
singlet/doubletdoublet
Overlap geneCul3, EG620899, 1700016L21Rik
Upstream geneScg2, Ap1s3, Wdfy1, Mrpl44, Serpine2, EG433326, LOC665064, LOC100039325, A830043J08Rik, 2310015K22Rik
Downstream geneDock10, LOC665092, 9430031J16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060O23.bB6Ng01-060O23.g
ACCDH881763DH881764
length664964
definitionDH881763|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O23, 5' end.DH881764|Mus musculus domesticus DNA, BAC clone: B6Ng01-060O23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(80,463,694 - 80,464,357)(80,294,997 - 80,295,956)
sequence
gaattctaagccaccctgtgctatgtgagaccccacccaaaaagggggca
ggtagagctggacatgctaatgcttcaccccttcatggcaacatctagtt
gcagcaaagcagttgccgcgtgcagttttcccatttctttcttttattca
tccggtttctaaggatatttgatttatgctcttgaagtgtctctacttaa
gttatggtctcatatgtcctcagtttccctttcagccaatcaatattttt
acatgtgtatcagtctgagtggggactgaaatgcctattctctaaacaga
ttcactacaggtcacagatatctatcaacgaatagttgttctctccacac
ctttgtccaaagaagtctccttaagtgccaaaaatatctcacttctggct
gcacatctggttcatctctttatgatttctagtaaatttatgattttatg
taaattgacccagaacaaccttaaacatctcccccacaaacttattgcca
tgtcacaagcactgtgtccatcaaaggcttgtgcttcccacctctgccac
tgtgtagtcatcaaatgtcaaaacaacaacagaatgacaacctctcagat
gtggtccagagtcaggagtcacagcaacagcaaatgcttccgatcaccgg
gggggggggggggg
gaattctggaggagttaagaatgaataggatcaaaatatactgtatgaaa
ttctcaaagaattgatataaaagcatactaatatttcaaaaaaatttttc
ttagctttaaattttcatttctggtaatattttaattaaaacagaatagt
acatgtatttaaaaaagtttgagacaggaaaatgaaagatatacaaataa
aaaaattggcttatgggatgtgaagataattctttctgaatttaaaataa
gatttagtaagtattttgaaaaggcagtcaatcaaaaaagatcatatact
atactgtttgcatgtgtctagcatgcacaaagagctgggctagtgatatg
acacaaaatggttgtataggcactgtccctgtcctcaattcagtctagca
gatcaagccatacaacagttaggacaataatccacatttttgaaggtttg
cttttagtggctcctatagcataattttcccccaattaatttaaatatta
atacagtaagaagcgtgtgattagacagaaaaaaggaaggcagagctaag
agttccagagacaggacagaagagaggaggacagagaagatggatggaga
agaggatgagccttatccacgtgctgttatatagccacaggaagctatga
atatcagaatagaataattggaataacttgtctaatttaggtgggtagct
tgtattattagcaactggctctgaaattattgtgtgagcaatgtgaattg
ataatttattgagatataaaactgactgataattataagttttgatttac
tgggttaaggggatttgtgacagctagccataggggaatggatggctggg
atgctacaagcagctctgaggcaggcaaccagagttgggaagaccaccgc
ctagacctcaggggcagagagtagcctgcagtattgtggggtggtgcctt
ttaatatttccgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_80463694_80464357
seq2: B6Ng01-060O23.b_46_709 (reverse)

seq1  CCCCCCCCCCCCCCCCGGTGATCGGAAGCATTTGCTGTTGCTGTGACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCCCGGTGATCGGAAGCATTTGCTGTTGCTGTGACTCC  50

seq1  TGACTCTGGACCACATCTGAGAGGTTGTCATTCTGTTGTTGTTTTGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGGACCACATCTGAGAGGTTGTCATTCTGTTGTTGTTTTGACAT  100

seq1  TTGATGACTACACAGTGGCAGAGGTGGGAAGCACAAGCCTTTGATGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGACTACACAGTGGCAGAGGTGGGAAGCACAAGCCTTTGATGGACA  150

seq1  CAGTGCTTGTGACATGGCAATAAGTTTGTGGGGGAGATGTTTAAGGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTTGTGACATGGCAATAAGTTTGTGGGGGAGATGTTTAAGGTTGT  200

seq1  TCTGGGTCAATTTACATAAAATCATAAATTTACTAGAAATCATAAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTCAATTTACATAAAATCATAAATTTACTAGAAATCATAAAGAGA  250

seq1  TGAACCAGATGTGCAGCCAGAAGTGAGATATTTTTGGCACTTAAGGAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCAGATGTGCAGCCAGAAGTGAGATATTTTTGGCACTTAAGGAGAC  300

seq1  TTCTTTGGACAAAGGTGTGGAGAGAACAACTATTCGTTGATAGATATCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGGACAAAGGTGTGGAGAGAACAACTATTCGTTGATAGATATCTG  350

seq1  TGACCTGTAGTGAATCTGTTTAGAGAATAGGCATTTCAGTCCCCACTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGTAGTGAATCTGTTTAGAGAATAGGCATTTCAGTCCCCACTCAG  400

seq1  ACTGATACACATGTAAAAATATTGATTGGCTGAAAGGGAAACTGAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACACATGTAAAAATATTGATTGGCTGAAAGGGAAACTGAGGACA  450

seq1  TATGAGACCATAACTTAAGTAGAGACACTTCAAGAGCATAAATCAAATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGACCATAACTTAAGTAGAGACACTTCAAGAGCATAAATCAAATAT  500

seq1  CCTTAGAAACCGGATGAATAAAAGAAAGAAATGGGAAAACTGCACGCGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGAAACCGGATGAATAAAAGAAAGAAATGGGAAAACTGCACGCGGC  550

seq1  AACTGCTTTGCTGCAACTAGATGTTGCCATGAAGGGGTGAAGCATTAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTTGCTGCAACTAGATGTTGCCATGAAGGGGTGAAGCATTAGCA  600

seq1  TGTCCAGCTCTACCTGCCCCCTTTTTGGGTGGGGTCTCACATAGCACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCTCTACCTGCCCCCTTTTTGGGTGGGGTCTCACATAGCACAGG  650

seq1  GTGGCTTAGAATTC  664
      ||||||||||||||
seq2  GTGGCTTAGAATTC  664

seq1: chr1_80294997_80295956
seq2: B6Ng01-060O23.g_71_1028

seq1  GAATTCTGGAGGAGTTAAGAATGAATAGGATCAAAATATACTGTATGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGGAGTTAAGAATGAATAGGATCAAAATATACTGTATGAAA  50

seq1  TTCTCAAAGAATTGATATAAAAGCATACTAATATTTCAAAAAAATTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAAGAATTGATATAAAAGCATACTAATATTTCAAAAAAATTTTTC  100

seq1  TTAGCTTTAAATTTTCATTTCTGGTAATATTTTAATTAAAACAGAATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTAAATTTTCATTTCTGGTAATATTTTAATTAAAACAGAATAGT  150

seq1  ACATGTATTTAAAAAAGTTTGAGACAGGAAAATGAAAGATATACAAATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTTAAAAAAGTTTGAGACAGGAAAATGAAAGATATACAAATAA  200

seq1  AAAAATTGGCTTATGGGATGTGAAGATAATTCTTTCTGAATTTAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGGCTTATGGGATGTGAAGATAATTCTTTCTGAATTTAAAATAA  250

seq1  GATTTAGTAAGTATTTTGAAAAGGCAGTCAATCAAAAAAGATCATATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTAAGTATTTTGAAAAGGCAGTCAATCAAAAAAGATCATATACT  300

seq1  ATACTGTTTGCATGTGTCTAGCATGCACAAAGAGCTGGGCTAGTGATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTTGCATGTGTCTAGCATGCACAAAGAGCTGGGCTAGTGATATG  350

seq1  ACACAAAATGGTTGTATAGGCACTGTCCCTGTCCTCAATTCAGTCTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAATGGTTGTATAGGCACTGTCCCTGTCCTCAATTCAGTCTAGCA  400

seq1  GATCAAGCCATACAACAGTTAGGACAATAATCCACATTTTTGAAGGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGCCATACAACAGTTAGGACAATAATCCACATTTTTGAAGGTTTG  450

seq1  CTTTTAGTGGCTCCTATAGCATAATTTTCCCCCAATTAATTTAAATATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTGGCTCCTATAGCATAATTTTCCCCCAATTAATTTAAATATTA  500

seq1  ATACAGTAAGAAGCGTGTGATTAGACAGAAAAAAGGAAGGCAGAGCTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTAAGAAGCGTGTGATTAGACAGAAAAAAGGAAGGCAGAGCTAAG  550

seq1  AGTTCCAGAGACAGGACAGAAGAGAGGAGGACAGAGAAGATGGATGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGAGACAGGACAGAAGAGAGGAGGACAGAGAAGATGGATGGAGA  600

seq1  AGAGGATGAGCCTTATCCACGTGCTGTTATATAGCCACAGGAAGCTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGAGCCTTATCCACGTGCTGTTATATAGCCACAGGAAGCTATGA  650

seq1  ATATCAGAATAGAATAATTGGAATAACTTGTCTAATTTAGGTGGGTAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAGAATAGAATAATTGGAATAACTTGTCTAATTTAGGTGGGTAGCT  700

seq1  TGTATTATTAGCAACTGGCTCTGAAATTATTGTGTGAGCAATGTGAATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATTAGCAACTGGCTCTGAAATTATTGTGTGAGCAATGTGAATTG  750

seq1  ATAATTTATTGAGATATAAAACTGACTGATAATTATAAGTTTTGATTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATTGAGATATAAAACTGACTGATAATTATAAGTTTTGATTTAC  800

seq1  TGGGTTAAGGGGATTTGTGACAGCTAGCCATAGGGGAATGGATGGCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAAGGGGATTTGTGACAGCTAGCCATAGGGGAATGGATGGCTGGG  850

seq1  ATGCTACAAGCAGCTCTGAGGCAGGCAACCAGAGTTGGGAAGACCACCGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTACAAGCAGCTCTGAGGCAGGCAACCAGAGTTGGGAAGACCACCGC  900

seq1  CTAGACCTCAGGGGCAGAGAGTAGCCTGCAGTATTGTGGGGTGGTGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACCTCAGGGGCAGAGAGTAGCCTGCAGTATTGTGGGGTGGTGCCTT  950

seq1  TTTAAATATT  960
      ||  ||||||
seq2  TT--AATATT  958