BAC Information

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BAC

Clone NameB6Ng01-061A22
Chromosome1 (Build37)
Map Location 163,583,219 - 163,584,269
singlet/doubletsinglet
Overlap genenone
Upstream geneRabgap1l, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6, Tnfsf4, Tnfsf18, EG435650
Downstream geneLOC100039623, LOC269134, Fasl, AI848100, EG665109, Pigc, Dnm3, LOC100039703, Dnm3os, 5630401D24Rik, Vamp4, LOC435651, Myoc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061A22.bB6Ng01-061A22.g
ACCDH881849DH881850
length5821,044
definitionDH881849|Mus musculus domesticus DNA, BAC clone: B6Ng01-061A22, 5' end.DH881850|Mus musculus domesticus DNA, BAC clone: B6Ng01-061A22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagccccattttttaatggggttatttgattttctgg
actccaccttcttgagttctctctccctccctccctccctccctccctcc
ctccctccctccatcccttctatcattcattctttcgttctttctctctt
tccttcatacggtcagtgcttccttcatgttaattgagcaaacacggtct
ggaaatacatgtctgtctagaaagccactcagtttctttgtgaacccatc
taacaaagaaaaacaacatggaaggaaagaaaacaaaagtgtgtgatgat
tggtaggttcgcacttcatcagatttatctgtcattcttgagaacttatt
aaaaagacgtggggaatcaaggaaagacagacaggctgcatggacggaag
gtttgaaggtaggctagaaacacaaaaaaaccatacgtgtgaggagtgga
atgaaaaaaaggaatttttttcaagaaaaaaaaaaaggaaagcaggatgt
aagggaacaaactgaggaatgtgttaggtagcgtgactgagaaagaagga
aacattaataagtttttatcaattaaatgatg
gaattctgaggaaccctgacatttaagagatgcgtggagggatctctaag
aggcaggaagtcaaagagcacagtgtcacaggagtggtcccagtgagatt
aaagtgtagctcatatgagtaatacaaaaccaacagggtgttgcttaggg
acaacaggaggaaggacacatactcaaggctataagtaagcaatagattc
agacataatgaggacaaagagggacacaagtgcacatgtggcttggcaga
tgctgaacagaagcacagaaaacacatcgatgcaaatcaacaagctacta
gataacaaacatatctctattataaaagcacatacaagttcttagaactt
caataactttcctgttgttgcccacaaaggctcccctgtgctgagatttg
acctttcctcatggtagcaatgcagttggagatgactcaaagggtgtttg
atcttggagaccaaattataacatgggtgaagcctgggagggagagttgc
agggagatggaggaacatgatatggatggatggacatggtttaaatcctt
ggtttgcatcaaggatcagcaggtctgaagaatgtggagatagtggagcc
cacacacaagaaacatctgcagacttagagcaaaagtgcatacaagattt
tgagattaaatggtagctcaaatcttgtgtaatagaaaaccatcgggctg
ttgcttggtgaccacaggtattatccttatctaagaattatgggaaaagc
tccagaggttatctctctcagactatctgaagacattcacgtaatactag
agatgtttggtctctacacattctataattattggtttctgggtgccagg
aaagcctaggctcaactttttattccataataaacatgctcatattttat
aataggaaatgcagccttagtgggaaataaaatgttaccaaataggtaga
aaatttgccataatcatcaccttcatagccactgttatcagtactctgta
taactgtgtttttcatgaagatggagtatactgtactactttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_163583219_163584269
seq2: B6Ng01-061A22.g_68_1111 (reverse)

seq1  ACAAAGTATGTACAGTATACTCCATCTTCATGAAAAACACAGTTATACAG  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTA-GTACAGTATACTCCATCTTCATGAAAAACACAGTTATACAG  49

seq1  AGTTACTGATTAACAGTGGCTATGAAGGTGATTGATTATGGCAAATTTTC  100
      || |||||| ||||||||||||||||||||| ||||||||||||||||||
seq2  AG-TACTGA-TAACAGTGGCTATGAAGGTGA-TGATTATGGCAAATTTTC  96

seq1  TACCTATTTTGGTAAACATTTTATTTCCCACTAAGGCTGCATTTCCTATT  150
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  TACCTA-TTTGGT-AACATTTTATTTCCCACTAAGGCTGCATTTCCTATT  144

seq1  ATAAAAATATGAGCATGTTTATTATGGAATAAAAAGTTGAGCCTAGGCTT  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AT-AAAATATGAGCATGTTTATTATGGAATAAAAAGTTGAGCCTAGGCTT  193

seq1  TCCTGGCACCCAGAAACCAATAATTATAGAATGTGTAGAGACCAAACATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCACCCAGAAACCAATAATTATAGAATGTGTAGAGACCAAACATC  243

seq1  TCTAGTATTACGTGAATGTCTTCAGATAGTCTGAGAGAGATAACCTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTATTACGTGAATGTCTTCAGATAGTCTGAGAGAGATAACCTCTGG  293

seq1  AGCTTTTCCCATAATTCTTAGATAAGGATAATACCTGTGGTCACCAAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCCCATAATTCTTAGATAAGGATAATACCTGTGGTCACCAAGCA  343

seq1  ACAGCCCGATGGTTTTCTATTACACAAGATTTGAGCTACCATTTAATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCCGATGGTTTTCTATTACACAAGATTTGAGCTACCATTTAATCTC  393

seq1  AAAATCTTGTATGCACTTTTGCTCTAAGTCTGCAGATGTTTCTTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGTATGCACTTTTGCTCTAAGTCTGCAGATGTTTCTTGTGTGT  443

seq1  GGGCTCCACTATCTCCACATTCTTCAGACCTGCTGATCCTTGATGCAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCACTATCTCCACATTCTTCAGACCTGCTGATCCTTGATGCAAAC  493

seq1  CAAGGATTTAAACCATGTCCATCCATCCATATCATGTTCCTCCATCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATTTAAACCATGTCCATCCATCCATATCATGTTCCTCCATCTCCC  543

seq1  TGCAACTCTCCCTCCCAGGCTTCACCCATGTTATAATTTGGTCTCCAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTCTCCCTCCCAGGCTTCACCCATGTTATAATTTGGTCTCCAAGA  593

seq1  TCAAACACCCTTTGAGTCATCTCCAACTGCATTGCTACCATGAGGAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACCCTTTGAGTCATCTCCAACTGCATTGCTACCATGAGGAAAGG  643

seq1  TCAAATCTCAGCACAGGGGAGCCTTTGTGGGCAACAACAGGAAAGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTCAGCACAGGGGAGCCTTTGTGGGCAACAACAGGAAAGTTATT  693

seq1  GAAGTTCTAAGAACTTGTATGTGCTTTTATAATAGAGATATGTTTGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTAAGAACTTGTATGTGCTTTTATAATAGAGATATGTTTGTTAT  743

seq1  CTAGTAGCTTGTTGATTTGCATCGATGTGTTTTCTGTGCTTCTGTTCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGCTTGTTGATTTGCATCGATGTGTTTTCTGTGCTTCTGTTCAGC  793

seq1  ATCTGCCAAGCCACATGTGCACTTGTGTCCCTCTTTGTCCTCATTATGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCAAGCCACATGTGCACTTGTGTCCCTCTTTGTCCTCATTATGTC  843

seq1  TGAATCTATTGCTTACTTATAGCCTTGAGTATGTGTCCTTCCTCCTGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTATTGCTTACTTATAGCCTTGAGTATGTGTCCTTCCTCCTGTTG  893

seq1  TCCCTAAGCAACACCCTGTTGGTTTTGTATTACTCATATGAGCTACACTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAGCAACACCCTGTTGGTTTTGTATTACTCATATGAGCTACACTT  943

seq1  TAATCTCACTGGGACCACTCCTGTGACACTGTGCTCTTTGACTTCCTGCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTCACTGGGACCACTCCTGTGACACTGTGCTCTTTGACTTCCTGCC  993

seq1  TCTTAGAGATCCCTCCACGCATCTCTTAAATGTCAGGGTTCCTCAGAATT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGATCCCTCCACGCATCTCTTAAATGTCAGGGTTCCTCAGAATT  1043

seq1  C  1051
      |
seq2  C  1044