BAC Information

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BAC

Clone NameB6Ng01-061N06
Chromosome1 (Build37)
Map Location 71,761,044 - 71,816,650
singlet/doubletdoublet
Overlap geneLOC383528
Upstream geneSpag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12, LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1
Downstream geneLOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061N06.bB6Ng01-061N06.g
ACCDH882402DH882403
length9621,124
definitionDH882402|Mus musculus domesticus DNA, BAC clone: B6Ng01-061N06, 5' end.DH882403|Mus musculus domesticus DNA, BAC clone: B6Ng01-061N06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,816,056 - 71,816,650)(71,761,044 - 71,762,195)
sequence
gaattcttgcttttcagctagtgagcaactttagccagaccctggagtga
agggtcccttccctttctcatgtctgcatagccttccctgtctttctagc
ttgccttcatattataatcacctaacagagttttgttttgttttttagcc
ttggttattggggtagtgagatggttcagaggctaagagtacttgctatg
caagtttgaggacctgagttcacatcactagtgcctatgtttaaaaaggc
ttctgtggtggcccccatctacagcctcagagctgggaagcagagataag
aggatcctaatagcttgctgatcttcaatggagccagccatcgaggttca
ggttcaatgagagaccctgttccaattgataaagcaatagagtgatcaag
gaagatgcctgacatcaacctctggcttaaacacacacacaccaccacca
ccaccaccaccaccaccacgaaccagacatacacacacaggaaataaaca
aaaaccccatgaatctcaatgtctaaaatatacaattgaagtgtcaatgc
tgggagctgcagagatggctcagctgttaagagcactgactgctcttcca
gaggtcctgagttcaatttccaacaaccacatggtggctcacaaccatcc
ataatgggatctgatgccctcttctggtgtgtttgaagagaacaatggta
tactcatataaataaaataaatcgaagaagaggagaaggaggaagggggg
ggggccgtcaatgccttggaacccaggcacctgtattttattgcagtcag
agcttcttagattattccaaccaggcaccaagacttcaaacatctacatt
atagcatatatgtctttttattgctttgcttttgtttttcaagacaggtt
tttgtttttgtttgtttgtttgttttctgtgtatccctggctgtcctagg
actcactgtaaa
gaattccctttcagctccagttttgcccacatcagctgctagacaggtaa
gggcaaaatcaagagggtacacaaagcataaggatgtggccccagcggca
ccacctgatgccaggttccctgcaaagtagctccaaaactgggtcctctt
gtccacaccacccagaaagatctgcttgtatttatctttgaaggcaaagt
tgagcctgcgtggggaagtatctgatgacattggccaggtttccacgcca
gaaggacaggactccctgttctttgggaatacgaaccacgcagtctataa
tgcccttgtattgcttatctgttgtgatttgcttgttggcatgctgcacc
tgcagcagcagcttgaccctctcgatgggtgctactgcagtcttggagat
ggccgcggcctttccactggccaagaagtccttggcgaaagacacagcgg
catctgtcgtgttaaaagcaaaaaaagaagaggcaggcaagtgtgggacg
ggactgggttgacaactggctttgactcccagactctgggctcatgttta
tttttttattttttattttttatttttttttttttggtttttcaagacag
gtttctctgtatagccctggctgttctggaactcactttgtagaccaggc
tgtcctcgaactcagaaatctgcctgcctctgcctcccgagtgttgggat
taaaggcgtgtgccaccactaactggcatttttttttggttatattctta
aaaaatacatttattttattttatcatttaaatgctcttaatcattgatc
atctctgcaccctcacaagaatacattttagggcattttttcatgatgtt
tgagtaatctgtttctatcttgttggagttaggatttttctgtgcttcta
acaccgggcaaaagaattcttgctgtttagtacagttgttcccctctaca
tattttatgacacagttacattactatagcccatgatgtagatctactcc
tacaataccaatggtgttatcatagtaacatggagatatgactatagcca
gtgggtgacatgaggctgaggatgtaatcagaggtgctttcacaactttg
atattctatcataactgagtggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_71816056_71816650
seq2: B6Ng01-061N06.b_48_642 (reverse)

seq1  GAGCAGTCAGTGCTCTTAACAGCTGAGCCATCTCTGCAGCTCCCAGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCAGTGCTCTTAACAGCTGAGCCATCTCTGCAGCTCCCAGCATT  50

seq1  GACACTTCAATTGTATATTTTAGACATTGAGATTCATGGGGTTTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCAATTGTATATTTTAGACATTGAGATTCATGGGGTTTTTGTTT  100

seq1  ATTTCCTGTGTGTGTATGTCTGGTTCGTGGTGGTGGTGGTGGTGGTGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGTGTGTGTATGTCTGGTTCGTGGTGGTGGTGGTGGTGGTGGTG  150

seq1  GTGGTGTGTGTGTGTTTAAGCCAGAGGTTGATGTCAGGCATCTTCCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGTGTGTGTGTTTAAGCCAGAGGTTGATGTCAGGCATCTTCCTTGA  200

seq1  TCACTCTATTGCTTTATCAATTGGAACAGGGTCTCTCATTGAACCTGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTATTGCTTTATCAATTGGAACAGGGTCTCTCATTGAACCTGAAC  250

seq1  CTCGATGGCTGGCTCCATTGAAGATCAGCAAGCTATTAGGATCCTCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATGGCTGGCTCCATTGAAGATCAGCAAGCTATTAGGATCCTCTTAT  300

seq1  CTCTGCTTCCCAGCTCTGAGGCTGTAGATGGGGGCCACCACAGAAGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCCCAGCTCTGAGGCTGTAGATGGGGGCCACCACAGAAGCCTT  350

seq1  TTTAAACATAGGCACTAGTGATGTGAACTCAGGTCCTCAAACTTGCATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACATAGGCACTAGTGATGTGAACTCAGGTCCTCAAACTTGCATAG  400

seq1  CAAGTACTCTTAGCCTCTGAACCATCTCACTACCCCAATAACCAAGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTACTCTTAGCCTCTGAACCATCTCACTACCCCAATAACCAAGGCTA  450

seq1  AAAAACAAAACAAAACTCTGTTAGGTGATTATAATATGAAGGCAAGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAACAAAACTCTGTTAGGTGATTATAATATGAAGGCAAGCTAG  500

seq1  AAAGACAGGGAAGGCTATGCAGACATGAGAAAGGGAAGGGACCCTTCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGGGAAGGCTATGCAGACATGAGAAAGGGAAGGGACCCTTCACT  550

seq1  CCAGGGTCTGGCTAAAGTTGCTCACTAGCTGAAAAGCAAGAATTC  595
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCTGGCTAAAGTTGCTCACTAGCTGAAAAGCAAGAATTC  595

seq1: chr1_71761044_71762195
seq2: B6Ng01-061N06.g_69_1192

seq1  GAATTCCCTTTCAGCTCCAGTTTTGCCCACATCAGCTGCTAGACAGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTTCAGCTCCAGTTTTGCCCACATCAGCTGCTAGACAGGTAA  50

seq1  GGGCAAAATCAAGAGGGTACACAAAGCATAAGGATGTGGCCCCAGCGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAAATCAAGAGGGTACACAAAGCATAAGGATGTGGCCCCAGCGGCA  100

seq1  CCACCTGATGCCAGGTTCCCTGCAAAGTAGCTCCAAAACTGGGTCCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGATGCCAGGTTCCCTGCAAAGTAGCTCCAAAACTGGGTCCTCTT  150

seq1  GTCCACACCACCCAGAAAGATCTGCTTGTATTTATCTTTGAAGGCAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACACCACCCAGAAAGATCTGCTTGTATTTATCTTTGAAGGCAAAGT  200

seq1  TGAGCCTGCGTGGGGAAGTATCTGATGACATTGGCCAGGTTTCCACGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTGCGTGGGGAAGTATCTGATGACATTGGCCAGGTTTCCACGCCA  250

seq1  GAAGGACAGGACTCCCTGTTCTTTGGGAATACGAACCACGCAGTCTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACAGGACTCCCTGTTCTTTGGGAATACGAACCACGCAGTCTATAA  300

seq1  TGCCCTTGTATTGCTTATCTGTTGTGATTTGCTTGTTGGCATGCTGCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTGTATTGCTTATCTGTTGTGATTTGCTTGTTGGCATGCTGCACC  350

seq1  TGCAGCAGCAGCTTGACCCTCTCGATGGGTGCTACTGCAGTCTTGGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAGCAGCTTGACCCTCTCGATGGGTGCTACTGCAGTCTTGGAGAT  400

seq1  GGCCGCGGCCTTTCCACTGGCCAAGAAGTCCTTGGCGAAAGACACAGCGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGCGGCCTTTCCACTGGCCAAGAAGTCCTTGGCGAAAGACACAGCGG  450

seq1  CATCTGTCGTGTTAAAAGCAAAAAAAGAAGAGGCAGGCAAGTGTGGGACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCGTGTTAAAAGCAAAAAAAGAAGAGGCAGGCAAGTGTGGGACG  500

seq1  GGACTGGGTTGACAACTGGCTTTGACTCCCAGACTCTGGGCTCATGTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGGTTGACAACTGGCTTTGACTCCCAGACTCTGGGCTCATGTTTA  550

seq1  TTTTTTTATTTTTTATTTTTTATTTTTTTTTTTTTGGTTTTTCAAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTTTTTATTTTTTATTTTTTTTTTTTTGGTTTTTCAAGACAG  600

seq1  GTTTCTCTGTATAGCCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTGTATAGCCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGC  650

seq1  TGTCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTTGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCGAACTCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGTTGGGAT  700

seq1  TAAAGGCGTGTGCCACCACTAACTGGCATTTTTTTTTGGTTATATTCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGTGCCACCACTAACTGGCATTTTTTTTTGGTTATATTCTTA  750

seq1  AAAAATACATTTATTTTATTTTATCATTTAAATGCTCTTAATCATTGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAAATACATTTATTTTATTTTATCATTTAAATGCTCTTAATCATTG-AT  799

seq1  CATCTCTGCACCCTCACAAGAATACATTTTAGGGCATTTTTTCATGATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGCACCCTCACAAGAATACATTTTAGGGCATTTTTTCATGATGT  849

seq1  TTGAGTAATCTGTTTCTATCTTGTTGGAGTTAGGATTTTTCTGTGCTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAATCTGTTTCTATCTTGTTGGAGTTAGGATTTTTCTGTGCTTCT  899

seq1  AAACACCGGGCAAAAGAATTCTTGCTGTTTTAGTACAGTTGTTCCCCTCT  950
       |||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  -AACACCGGGCAAAAGAATTCTTGCTG-TTTAGTACAGTTGTTCCCCTCT  947

seq1  ACAATATTTTTATGACAACAGTTAACATTACTATAGCCCATGATGTAGAT  1000
      || ||| ||||||||| |||||| ||||||||||||||||||||||||| 
seq2  AC-ATA-TTTTATGAC-ACAGTT-ACATTACTATAGCCCATGATGTAGA-  992

seq1  TCTAACTCCTAACAATACCAATGGTGTTATCATAGTTACATTGAAGAATT  1050
      ||| |||||| ||||||||||||||||||||||||| ||| || |||  |
seq2  TCT-ACTCCT-ACAATACCAATGGTGTTATCATAGTAACA-TGGAGA--T  1037

seq1  ATGACTAGTAGCCAAGTGGTGACATGAAAGGCTTGAAGGATGTATCCAAG  1100
      ||||||| ||||||   |||||||||  |||||   ||||||||  | ||
seq2  ATGACTA-TAGCCAGTGGGTGACATG--AGGCT--GAGGATGTAATC-AG  1081

seq1  AAGTGCTTTCAACCATACTTTTGGATTATTTCTATCATAACTTGAAGTGG  1150
      | |||||||||  || |||||  |||   |||||||||||||   |||||
seq2  AGGTGCTTTCA--CA-ACTTT--GAT--ATTCTATCATAACT--GAGTGG  1122

seq1  AA  1152
      ||
seq2  AA  1124